data_6O3C # _model_server_result.job_id jKdtoWVyftTer_VPMVc1GA _model_server_result.datetime_utc '2025-01-02 21:48:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":613}' # _entry.id 6O3C # _exptl.entry_id 6O3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6O3C _cell.length_a 39.01 _cell.length_b 121.09 _cell.length_c 157.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall 'P 2c 2' _symmetry.space_group_name_H-M 'P 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 N N N ? 8 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 A CYS 68 1_555 A SG CYS 141 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 33 A CYS 74 1_555 A SG CYS 97 A CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 41 A CYS 82 1_555 A SG CYS 90 A CYS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 81 A CYS 122 1_555 A SG CYS 117 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 A SG CYS 110 A CYS 151 1_555 A SG CYS 132 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 A SG CYS 156 A CYS 197 1_555 A SG CYS 176 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 A SG CYS 180 A CYS 221 1_555 A SG CYS 258 A CYS 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 A SG CYS 277 A CYS 318 1_555 A SG CYS 353 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf9 A SG CYS 453 A CYS 494 1_555 A SG CYS 470 A CYS 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 B SG CYS 22 B CYS 22 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 39 A ASN 80 1_555 K C1 NAG . A NAG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 456 A ASN 497 1_555 L C1 NAG . A NAG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? metalc ? metalc1 A O THR 53 A THR 94 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc2 A O ALA 56 A ALA 97 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc3 A O SER 59 A SER 100 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc4 A OD1 ASP 60 A ASP 101 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.021 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 6O3C _atom_sites.fract_transf_matrix[1][1] 0.025634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 601 6 PO4 PO4 . D 4 NA A 1 602 7 NA NA . E 5 OLB A 1 603 10 OLB OLB . F 5 OLB A 1 604 11 OLB OLB . G 5 OLB A 1 605 12 OLB OLB . H 5 OLB A 1 606 13 OLB OLB . I 5 OLB A 1 607 14 OLB OLB . J 5 OLB A 1 608 15 OLB OLB . K 6 NAG A 1 609 100 NAG NAG . L 6 NAG A 1 610 101 NAG NAG . M 7 LKD A 1 611 102 LKD LIG . N 8 CLR A 1 612 103 CLR CLR . O 8 CLR A 1 613 104 CLR CLR . P 9 HOH A 1 701 1 HOH HOH . P 9 HOH A 2 702 3 HOH HOH . P 9 HOH A 3 703 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . O 8 -0.556 50.167 17.93 1 68.82 ? C1 CLR 613 A 1 HETATM 2 C C2 CLR . . . O 8 -0.99 51.529 17.446 1 77.91 ? C2 CLR 613 A 1 HETATM 3 C C3 CLR . . . O 8 -0.264 51.752 16.141 1 78.48 ? C3 CLR 613 A 1 HETATM 4 C C4 CLR . . . O 8 -0.677 50.691 15.121 1 78.88 ? C4 CLR 613 A 1 HETATM 5 C C5 CLR . . . O 8 -0.479 49.4 15.615 1 68.88 ? C5 CLR 613 A 1 HETATM 6 C C6 CLR . . . O 8 0.012 48.451 14.711 1 72.73 ? C6 CLR 613 A 1 HETATM 7 C C7 CLR . . . O 8 0.301 47.138 15.058 1 78.75 ? C7 CLR 613 A 1 HETATM 8 C C8 CLR . . . O 8 -0.476 46.701 16.285 1 77.81 ? C8 CLR 613 A 1 HETATM 9 C C9 CLR . . . O 8 -0.249 47.739 17.378 1 76.17 ? C9 CLR 613 A 1 HETATM 10 C C10 CLR . . . O 8 -0.906 49.071 16.918 1 70.8 ? C10 CLR 613 A 1 HETATM 11 C C11 CLR . . . O 8 -0.786 47.283 18.767 1 75.85 ? C11 CLR 613 A 1 HETATM 12 C C12 CLR . . . O 8 -0.26 45.908 19.117 1 68.49 ? C12 CLR 613 A 1 HETATM 13 C C13 CLR . . . O 8 -0.691 44.903 18.006 1 65.42 ? C13 CLR 613 A 1 HETATM 14 C C14 CLR . . . O 8 0.04 45.358 16.734 1 74.56 ? C14 CLR 613 A 1 HETATM 15 C C15 CLR . . . O 8 -0.278 44.251 15.758 1 76.64 ? C15 CLR 613 A 1 HETATM 16 C C16 CLR . . . O 8 -0.045 43.011 16.626 1 59.92 ? C16 CLR 613 A 1 HETATM 17 C C17 CLR . . . O 8 -0.03 43.541 18.104 1 71.31 ? C17 CLR 613 A 1 HETATM 18 C C18 CLR . . . O 8 -2.242 44.772 17.899 1 77.79 ? C18 CLR 613 A 1 HETATM 19 C C19 CLR . . . O 8 -2.453 48.949 16.832 1 70.53 ? C19 CLR 613 A 1 HETATM 20 C C20 CLR . . . O 8 -0.689 42.525 19.065 1 67.53 ? C20 CLR 613 A 1 HETATM 21 C C21 CLR . . . O 8 -0.753 43.02 20.523 1 66.75 ? C21 CLR 613 A 1 HETATM 22 C C22 CLR . . . O 8 0.125 41.24 19.017 1 60.63 ? C22 CLR 613 A 1 HETATM 23 C C23 CLR . . . O 8 -0.648 40.091 19.655 1 68.23 ? C23 CLR 613 A 1 HETATM 24 C C24 CLR . . . O 8 0.3 39.359 20.592 1 82.2 ? C24 CLR 613 A 1 HETATM 25 C C25 CLR . . . O 8 -0.127 37.907 20.683 1 82.36 ? C25 CLR 613 A 1 HETATM 26 C C26 CLR . . . O 8 0.292 37.352 22.038 1 70.46 ? C26 CLR 613 A 1 HETATM 27 C C27 CLR . . . O 8 0.575 37.149 19.561 1 84.14 ? C27 CLR 613 A 1 HETATM 28 O O1 CLR . . . O 8 -0.573 53.056 15.62 1 66.14 ? O1 CLR 613 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #