data_6O3J # _model_server_result.job_id gxNR49fOKrOwMApoyFXvoQ _model_server_result.datetime_utc '2024-11-22 21:48:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 6O3J # _exptl.entry_id 6O3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.36 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.49 _cell.angle_gamma 90 _cell.entry_id 6O3J _cell.length_a 181.859 _cell.length_b 43.931 _cell.length_c 154.526 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G 1 1 C,D,F,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 135 L CYS 134 1_555 A SG CYS 195 L CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 135 L CYS 134 1_555 A SG CYS 195 L CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.212 ? disulf ? disulf5 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.244 ? disulf ? disulf6 B SG CYS 151 H CYS 142 1_555 B SG CYS 207 H CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 B SG CYS 151 H CYS 142 1_555 B SG CYS 207 H CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 C SG CYS 23 B CYS 23 1_555 C SG CYS 89 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf9 C SG CYS 135 B CYS 134 1_555 C SG CYS 195 B CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.041 ? disulf ? disulf10 C SG CYS 135 B CYS 134 1_555 C SG CYS 195 B CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 D SG CYS 22 A CYS 22 1_555 D SG CYS 96 A CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.231 ? disulf ? disulf12 D SG CYS 22 A CYS 22 1_555 D SG CYS 96 A CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.217 ? disulf ? disulf13 D SG CYS 151 A CYS 142 1_555 D SG CYS 207 A CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.03 ? disulf ? disulf14 D SG CYS 151 A CYS 142 1_555 D SG CYS 207 A CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C15 H29 O8 P' _chem_comp.formula_weight 368.36 _chem_comp.id 44E _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 44E doub 1 n n O12 P 44E doub 2 n n C1 C2 44E sing 3 n n C1 O11 44E sing 4 n n C2 C3 44E sing 5 n n C2 O21 44E sing 6 n n C23 C22 44E sing 7 n n C21 O21 44E sing 8 n n C21 C22 44E sing 9 n n C3 O31 44E sing 10 n n O11 P 44E sing 11 n n P O14 44E sing 12 n n P O13 44E sing 13 n n C32 C33 44E sing 14 n n C32 C31 44E sing 15 n n O31 C31 44E sing 16 n n C33 C34 44E sing 17 n n C31 O32 44E doub 18 n n C34 C35 44E sing 19 n n C36 C35 44E sing 20 n n O13 H1 44E sing 21 n n O14 H2 44E sing 22 n n C1 H3 44E sing 23 n n C1 H4 44E sing 24 n n C2 H5 44E sing 25 n n C22 H6 44E sing 26 n n C22 H7 44E sing 27 n n C23 H8 44E sing 28 n n C23 H9 44E sing 29 n n C3 H11 44E sing 30 n n C3 H12 44E sing 31 n n C32 H13 44E sing 32 n n C32 H14 44E sing 33 n n C33 H15 44E sing 34 n n C33 H16 44E sing 35 n n C34 H17 44E sing 36 n n C34 H18 44E sing 37 n n C35 H19 44E sing 38 n n C35 H20 44E sing 39 n n C36 H21 44E sing 40 n n C36 H22 44E sing 41 n n C36 H23 44E sing 42 n n C23 C4 44E sing 43 n n C4 C5 44E sing 44 n n C5 C6 44E sing 45 n n C4 H10 44E sing 46 n n C4 H24 44E sing 47 n n C5 H25 44E sing 48 n n C5 H26 44E sing 49 n n C6 H27 44E sing 50 n n C6 H28 44E sing 51 n n C6 H29 44E sing 52 n n # _atom_sites.entry_id 6O3J _atom_sites.fract_transf_matrix[1][1] 0.005499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000239 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 44E H 1 301 2 44E 44E . H 4 44E A 1 301 1 44E 44E . I 5 MPD A 1 302 1 MPD MPD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O13 44E . . . G 4 -44.365 13.674 68.143 1 176.88 ? O13 44E 301 H 1 HETATM 2 P P 44E . . . G 4 -42.862 13.339 67.677 1 262.64 ? P 44E 301 H 1 HETATM 3 O O14 44E . . . G 4 -42.632 11.88 67.761 1 166.37 ? O14 44E 301 H 1 HETATM 4 O O12 44E . . . G 4 -42.653 13.825 66.156 1 173.29 ? O12 44E 301 H 1 HETATM 5 O O11 44E . . . G 4 -41.82 14.1 68.64 1 166.29 ? O11 44E 301 H 1 HETATM 6 C C1 44E . . . G 4 -41.577 15.507 68.574 1 150.46 ? C1 44E 301 H 1 HETATM 7 C C2 44E . . . G 4 -41.847 16.139 69.942 1 156.18 ? C2 44E 301 H 1 HETATM 8 O O21 44E . . . G 4 -41.078 15.438 70.954 1 159.46 ? O21 44E 301 H 1 HETATM 9 C C3 44E . . . G 4 -43.336 16.035 70.281 1 167.11 ? C3 44E 301 H 1 HETATM 10 O O31 44E . . . G 4 -44.096 16.998 69.503 1 149.47 ? O31 44E 301 H 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #