data_6O3U
#
_model_server_result.job_id            zc_rB-IMl9D56gnZG3k3Aw 
_model_server_result.datetime_utc      '2024-11-25 10:00:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6o3u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":303}' 
#
_entry.id    6O3U 
#
_exptl.entry_id    6O3U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6O3U 
_cell.length_a            276.2 
_cell.length_b            276.2 
_cell.length_c            276.2 
_cell.Z_PDB               96 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6O3U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        199 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 21 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,N,O,P,OA,PA 1 1 
C,D,Q,R,S,T,U,V,W,X,Y,Z,QA,RA 2 1 
E,F,AA,BA,CA,DA,EA,FA,GA,SA,TA 3 1 
G,H,HA,IA,JA,KA,LA,MA,NA,UA,VA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 AA N N 
? 3 BA N N 
? 3 HA N N 
? 3 IA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 135 L CYS 134 1_555 A SG CYS 195 L CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 A SG CYS 135 L CYS 134 1_555 A SG CYS 195 L CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.228 ? 
disulf ? disulf5 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.241 ? 
disulf ? disulf6 B SG CYS 151 H CYS 142 1_555 B SG CYS 207 H CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 B SG CYS 151 H CYS 142 1_555 B SG CYS 207 H CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf8 C SG CYS 23 A CYS 23 1_555 C SG CYS 89 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf9 C SG CYS 135 A CYS 134 1_555 C SG CYS 195 A CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf10 C SG CYS 135 A CYS 134 1_555 C SG CYS 195 A CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 22 B CYS 22 1_555 D SG CYS 96 B CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.275 ? 
disulf ? disulf12 D SG CYS 22 B CYS 22 1_555 D SG CYS 96 B CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.253 ? 
disulf ? disulf13 D SG CYS 151 B CYS 142 1_555 D SG CYS 207 B CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf14 D SG CYS 151 B CYS 142 1_555 D SG CYS 207 B CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf15 E SG CYS 23 C CYS 23 1_555 E SG CYS 89 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf16 E SG CYS 135 C CYS 134 1_555 E SG CYS 195 C CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 E SG CYS 135 C CYS 134 1_555 E SG CYS 195 C CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf18 F SG CYS 22 D CYS 22 1_555 F SG CYS 96 D CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.279 ? 
disulf ? disulf19 F SG CYS 22 D CYS 22 1_555 F SG CYS 96 D CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.219 ? 
disulf ? disulf20 F SG CYS 151 D CYS 142 1_555 F SG CYS 207 D CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf21 F SG CYS 151 D CYS 142 1_555 F SG CYS 207 D CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf22 G SG CYS 23 E CYS 23 1_555 G SG CYS 89 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf23 G SG CYS 135 E CYS 134 1_555 G SG CYS 195 E CYS 194 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf24 G SG CYS 135 E CYS 134 1_555 G SG CYS 195 E CYS 194 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf25 H SG CYS 22 F CYS 22 1_555 H SG CYS 96 F CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.212 ? 
disulf ? disulf26 H SG CYS 22 F CYS 22 1_555 H SG CYS 96 F CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.229 ? 
disulf ? disulf27 H SG CYS 151 F CYS 142 1_555 H SG CYS 207 F CYS 208 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf28 H SG CYS 151 F CYS 142 1_555 H SG CYS 207 F CYS 208 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 181 n n 
C1 C2 GOL sing 182 n n 
C1 H11 GOL sing 183 n n 
C1 H12 GOL sing 184 n n 
O1 HO1 GOL sing 185 n n 
C2 O2 GOL sing 186 n n 
C2 C3 GOL sing 187 n n 
C2 H2 GOL sing 188 n n 
O2 HO2 GOL sing 189 n n 
C3 O3 GOL sing 190 n n 
C3 H31 GOL sing 191 n n 
C3 H32 GOL sing 192 n n 
O3 HO3 GOL sing 193 n n 
#
_atom_sites.entry_id                     6O3U 
_atom_sites.fract_transf_matrix[1][1]    0.003621 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003621 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003621 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 GOL L 1 301 4 GOL GOL . 
J 3 GOL L 1 302 11 GOL GOL . 
K 3 GOL H 1 301 5 GOL GOL . 
L 4 SO4 H 1 302 6 SO4 SO4 . 
M 4 SO4 H 1 303 7 SO4 SO4 . 
N 4 SO4 H 1 304 14 SO4 SO4 . 
O 5 44E H 1 305 1 44E 44E . 
P 5 44E H 1 306 8 44E 44E . 
Q 3 GOL A 1 301 6 GOL GOL . 
R 3 GOL A 1 302 7 GOL GOL . 
S 3 GOL A 1 303 12 GOL GOL . 
T 4 SO4 A 1 304 15 SO4 SO4 . 
U 4 SO4 B 1 301 2 SO4 SO4 . 
V 4 SO4 B 1 302 8 SO4 SO4 . 
W 4 SO4 B 1 303 9 SO4 SO4 . 
X 4 SO4 B 1 304 10 SO4 SO4 . 
Y 5 44E B 1 305 4 44E 44E . 
Z 5 44E B 1 306 7 44E 44E . 
AA 3 GOL C 1 301 13 GOL GOL . 
BA 3 GOL D 1 301 9 GOL GOL . 
CA 4 SO4 D 1 302 3 SO4 SO4 . 
DA 4 SO4 D 1 303 11 SO4 SO4 . 
EA 4 SO4 D 1 304 13 SO4 SO4 . 
FA 5 44E D 1 305 6 44E 44E . 
GA 5 44E D 1 306 9 44E 44E . 
HA 3 GOL E 1 301 3 GOL GOL . 
IA 3 GOL F 1 301 10 GOL GOL . 
JA 4 SO4 F 1 302 5 SO4 SO4 . 
KA 4 SO4 F 1 303 12 SO4 SO4 . 
LA 4 SO4 F 1 304 16 SO4 SO4 . 
MA 5 44E F 1 305 2 44E 44E . 
NA 5 44E F 1 306 3 44E 44E . 
OA 6 HOH L 1 401 18 HOH HOH . 
OA 6 HOH L 2 402 40 HOH HOH . 
OA 6 HOH L 3 403 15 HOH HOH . 
OA 6 HOH L 4 404 14 HOH HOH . 
OA 6 HOH L 5 405 12 HOH HOH . 
OA 6 HOH L 6 406 13 HOH HOH . 
OA 6 HOH L 7 407 19 HOH HOH . 
PA 6 HOH H 1 401 23 HOH HOH . 
PA 6 HOH H 2 402 22 HOH HOH . 
PA 6 HOH H 3 403 24 HOH HOH . 
PA 6 HOH H 4 404 1 HOH HOH . 
PA 6 HOH H 5 405 21 HOH HOH . 
PA 6 HOH H 6 406 16 HOH HOH . 
QA 6 HOH A 1 401 25 HOH HOH . 
QA 6 HOH A 2 402 26 HOH HOH . 
QA 6 HOH A 3 403 27 HOH HOH . 
QA 6 HOH A 4 404 28 HOH HOH . 
RA 6 HOH B 1 401 29 HOH HOH . 
SA 6 HOH C 1 401 5 HOH HOH . 
SA 6 HOH C 2 402 6 HOH HOH . 
SA 6 HOH C 3 403 4 HOH HOH . 
SA 6 HOH C 4 404 32 HOH HOH . 
SA 6 HOH C 5 405 38 HOH HOH . 
TA 6 HOH D 1 401 33 HOH HOH . 
TA 6 HOH D 2 402 30 HOH HOH . 
TA 6 HOH D 3 403 8 HOH HOH . 
TA 6 HOH D 4 404 34 HOH HOH . 
TA 6 HOH D 5 405 31 HOH HOH . 
TA 6 HOH D 6 406 9 HOH HOH . 
UA 6 HOH E 1 401 36 HOH HOH . 
UA 6 HOH E 2 402 10 HOH HOH . 
UA 6 HOH E 3 403 35 HOH HOH . 
VA 6 HOH F 1 401 39 HOH HOH . 
VA 6 HOH F 2 402 11 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . S 3 -7.859 49.682 16.018 1 114.92 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . S 3 -8.652 50.488 15.205 1 91.21 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . S 3 -6.931 48.867 15.088 1 119.71 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . S 3 -6.04 49.677 14.395 1 123.9 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . S 3 -6.216 47.873 16.03 1 101.23 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . S 3 -5.376 47.1 15.235 1 84.21 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#