data_6O67 # _model_server_result.job_id uhJcSd9g6pyCx8_4RfCFPg _model_server_result.datetime_utc '2025-07-05 13:14:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6O67 # _exptl.entry_id 6O67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.422 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Mitoglitazone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.14 _cell.angle_gamma 90 _cell.entry_id 6O67 _cell.length_a 92.93 _cell.length_b 60.35 _cell.length_c 118.11 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H18 N2 O4 S' _chem_comp.formula_weight 370.422 _chem_comp.id LO7 _chem_comp.mon_nstd_flag . _chem_comp.name Mitoglitazone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (5S)-5-({4-[2-(5-ethylpyridin-2-yl)-2-oxoethoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C14 LO7 doub 222 n y C15 C16 LO7 sing 223 n y C14 C13 LO7 sing 224 n y O22 C21 LO7 doub 225 n n C19 C16 LO7 sing 226 n n C19 C20 LO7 sing 227 n n C16 C17 LO7 doub 228 n y C11 C09 LO7 sing 229 n n C11 O12 LO7 sing 230 n n O10 C09 LO7 doub 231 n n C21 C20 LO7 sing 232 n n C21 N23 LO7 sing 233 n n C09 C06 LO7 sing 234 n n N05 C04 LO7 doub 235 n y N05 C06 LO7 sing 236 n y C13 O12 LO7 sing 237 n n C13 C18 LO7 doub 238 n y C04 C03 LO7 sing 239 n y C20 S26 LO7 sing 240 n n C06 C07 LO7 doub 241 n y C17 C18 LO7 sing 242 n y C03 C02 LO7 sing 243 n n C03 C08 LO7 doub 244 n y N23 C24 LO7 sing 245 n n C07 C08 LO7 sing 246 n y C02 C01 LO7 sing 247 n n S26 C24 LO7 sing 248 n n C24 O25 LO7 doub 249 n n C15 H1 LO7 sing 250 n n C17 H2 LO7 sing 251 n n C20 H3 LO7 sing 252 n n C01 H4 LO7 sing 253 n n C01 H5 LO7 sing 254 n n C01 H6 LO7 sing 255 n n C02 H7 LO7 sing 256 n n C02 H8 LO7 sing 257 n n C04 H9 LO7 sing 258 n n C07 H10 LO7 sing 259 n n C08 H11 LO7 sing 260 n n C11 H12 LO7 sing 261 n n C11 H13 LO7 sing 262 n n C14 H14 LO7 sing 263 n n C18 H15 LO7 sing 264 n n C19 H16 LO7 sing 265 n n C19 H17 LO7 sing 266 n n N23 H18 LO7 sing 267 n n # _atom_sites.entry_id 6O67 _atom_sites.fract_transf_matrix[1][1] 0.010761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002512 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01657 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LO7 A 1 501 501 LO7 LIG . D 3 KNA A 1 502 503 KNA KNA . E 4 HOH A 1 601 97 HOH HOH . E 4 HOH A 2 602 150 HOH HOH . E 4 HOH A 3 603 99 HOH HOH . E 4 HOH A 4 604 143 HOH HOH . E 4 HOH A 5 605 48 HOH HOH . E 4 HOH A 6 606 126 HOH HOH . E 4 HOH A 7 607 122 HOH HOH . E 4 HOH A 8 608 102 HOH HOH . E 4 HOH A 9 609 146 HOH HOH . E 4 HOH A 10 610 115 HOH HOH . E 4 HOH A 11 611 103 HOH HOH . E 4 HOH A 12 612 21 HOH HOH . E 4 HOH A 13 613 66 HOH HOH . E 4 HOH A 14 614 138 HOH HOH . E 4 HOH A 15 615 85 HOH HOH . E 4 HOH A 16 616 3 HOH HOH . E 4 HOH A 17 617 80 HOH HOH . E 4 HOH A 18 618 36 HOH HOH . E 4 HOH A 19 619 60 HOH HOH . E 4 HOH A 20 620 1 HOH HOH . E 4 HOH A 21 621 76 HOH HOH . E 4 HOH A 22 622 149 HOH HOH . E 4 HOH A 23 623 68 HOH HOH . E 4 HOH A 24 624 136 HOH HOH . E 4 HOH A 25 625 46 HOH HOH . E 4 HOH A 26 626 119 HOH HOH . E 4 HOH A 27 627 56 HOH HOH . E 4 HOH A 28 628 28 HOH HOH . E 4 HOH A 29 629 24 HOH HOH . E 4 HOH A 30 630 27 HOH HOH . E 4 HOH A 31 631 6 HOH HOH . E 4 HOH A 32 632 53 HOH HOH . E 4 HOH A 33 633 9 HOH HOH . E 4 HOH A 34 634 156 HOH HOH . E 4 HOH A 35 635 5 HOH HOH . E 4 HOH A 36 636 38 HOH HOH . E 4 HOH A 37 637 144 HOH HOH . E 4 HOH A 38 638 22 HOH HOH . E 4 HOH A 39 639 77 HOH HOH . E 4 HOH A 40 640 154 HOH HOH . E 4 HOH A 41 641 35 HOH HOH . E 4 HOH A 42 642 155 HOH HOH . E 4 HOH A 43 643 16 HOH HOH . E 4 HOH A 44 644 118 HOH HOH . E 4 HOH A 45 645 23 HOH HOH . E 4 HOH A 46 646 45 HOH HOH . E 4 HOH A 47 647 73 HOH HOH . E 4 HOH A 48 648 57 HOH HOH . E 4 HOH A 49 649 62 HOH HOH . E 4 HOH A 50 650 29 HOH HOH . E 4 HOH A 51 651 71 HOH HOH . E 4 HOH A 52 652 63 HOH HOH . E 4 HOH A 53 653 8 HOH HOH . E 4 HOH A 54 654 52 HOH HOH . E 4 HOH A 55 655 18 HOH HOH . E 4 HOH A 56 656 58 HOH HOH . E 4 HOH A 57 657 69 HOH HOH . E 4 HOH A 58 658 26 HOH HOH . E 4 HOH A 59 659 112 HOH HOH . E 4 HOH A 60 660 42 HOH HOH . E 4 HOH A 61 661 82 HOH HOH . E 4 HOH A 62 662 15 HOH HOH . E 4 HOH A 63 663 43 HOH HOH . E 4 HOH A 64 664 30 HOH HOH . E 4 HOH A 65 665 33 HOH HOH . E 4 HOH A 66 666 106 HOH HOH . E 4 HOH A 67 667 128 HOH HOH . E 4 HOH A 68 668 145 HOH HOH . E 4 HOH A 69 669 41 HOH HOH . E 4 HOH A 70 670 111 HOH HOH . E 4 HOH A 71 671 72 HOH HOH . E 4 HOH A 72 672 139 HOH HOH . E 4 HOH A 73 673 133 HOH HOH . E 4 HOH A 74 674 116 HOH HOH . E 4 HOH A 75 675 70 HOH HOH . E 4 HOH A 76 676 79 HOH HOH . E 4 HOH A 77 677 39 HOH HOH . E 4 HOH A 78 678 123 HOH HOH . E 4 HOH A 79 679 114 HOH HOH . E 4 HOH A 80 680 160 HOH HOH . E 4 HOH A 81 681 101 HOH HOH . E 4 HOH A 82 682 163 HOH HOH . E 4 HOH A 83 683 107 HOH HOH . E 4 HOH A 84 684 159 HOH HOH . E 4 HOH A 85 685 78 HOH HOH . E 4 HOH A 86 686 125 HOH HOH . E 4 HOH A 87 687 140 HOH HOH . E 4 HOH A 88 688 110 HOH HOH . E 4 HOH A 89 689 148 HOH HOH . E 4 HOH A 90 690 131 HOH HOH . E 4 HOH A 91 691 81 HOH HOH . E 4 HOH A 92 692 20 HOH HOH . E 4 HOH A 93 693 105 HOH HOH . E 4 HOH A 94 694 142 HOH HOH . E 4 HOH A 95 695 67 HOH HOH . F 4 HOH B 1 501 49 HOH HOH . F 4 HOH B 2 502 61 HOH HOH . F 4 HOH B 3 503 129 HOH HOH . F 4 HOH B 4 504 2 HOH HOH . F 4 HOH B 5 505 17 HOH HOH . F 4 HOH B 6 506 65 HOH HOH . F 4 HOH B 7 507 31 HOH HOH . F 4 HOH B 8 508 121 HOH HOH . F 4 HOH B 9 509 13 HOH HOH . F 4 HOH B 10 510 75 HOH HOH . F 4 HOH B 11 511 14 HOH HOH . F 4 HOH B 12 512 11 HOH HOH . F 4 HOH B 13 513 12 HOH HOH . F 4 HOH B 14 514 4 HOH HOH . F 4 HOH B 15 515 55 HOH HOH . F 4 HOH B 16 516 50 HOH HOH . F 4 HOH B 17 517 84 HOH HOH . F 4 HOH B 18 518 94 HOH HOH . F 4 HOH B 19 519 37 HOH HOH . F 4 HOH B 20 520 44 HOH HOH . F 4 HOH B 21 521 91 HOH HOH . F 4 HOH B 22 522 19 HOH HOH . F 4 HOH B 23 523 32 HOH HOH . F 4 HOH B 24 524 59 HOH HOH . F 4 HOH B 25 525 83 HOH HOH . F 4 HOH B 26 526 158 HOH HOH . F 4 HOH B 27 527 89 HOH HOH . F 4 HOH B 28 528 10 HOH HOH . F 4 HOH B 29 529 87 HOH HOH . F 4 HOH B 30 530 152 HOH HOH . F 4 HOH B 31 531 95 HOH HOH . F 4 HOH B 32 532 100 HOH HOH . F 4 HOH B 33 533 25 HOH HOH . F 4 HOH B 34 534 64 HOH HOH . F 4 HOH B 35 535 96 HOH HOH . F 4 HOH B 36 536 134 HOH HOH . F 4 HOH B 37 537 93 HOH HOH . F 4 HOH B 38 538 88 HOH HOH . F 4 HOH B 39 539 113 HOH HOH . F 4 HOH B 40 540 153 HOH HOH . F 4 HOH B 41 541 90 HOH HOH . F 4 HOH B 42 542 157 HOH HOH . F 4 HOH B 43 543 47 HOH HOH . F 4 HOH B 44 544 40 HOH HOH . F 4 HOH B 45 545 162 HOH HOH . F 4 HOH B 46 546 92 HOH HOH . F 4 HOH B 47 547 34 HOH HOH . F 4 HOH B 48 548 51 HOH HOH . F 4 HOH B 49 549 54 HOH HOH . F 4 HOH B 50 550 137 HOH HOH . F 4 HOH B 51 551 124 HOH HOH . F 4 HOH B 52 552 108 HOH HOH . F 4 HOH B 53 553 7 HOH HOH . F 4 HOH B 54 554 117 HOH HOH . F 4 HOH B 55 555 98 HOH HOH . F 4 HOH B 56 556 127 HOH HOH . F 4 HOH B 57 557 151 HOH HOH . F 4 HOH B 58 558 74 HOH HOH . F 4 HOH B 59 559 132 HOH HOH . F 4 HOH B 60 560 135 HOH HOH . F 4 HOH B 61 561 109 HOH HOH . F 4 HOH B 62 562 86 HOH HOH . F 4 HOH B 63 563 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 LO7 . . . C 2 13.349 67.86 9.407 1 30 ? C13 LO7 501 A 1 HETATM 2 C C15 LO7 . . . C 2 14.139 69.505 7.965 1 30 ? C15 LO7 501 A 1 HETATM 3 C C17 LO7 . . . C 2 14.086 69.917 10.264 1 30 ? C17 LO7 501 A 1 HETATM 4 C C20 LO7 . . . C 2 15.991 72.099 9.72 1 30 ? C20 LO7 501 A 1 HETATM 5 C C21 LO7 . . . C 2 16.699 73.375 9.26 1 30 ? C21 LO7 501 A 1 HETATM 6 C C24 LO7 . . . C 2 15.917 73.854 11.611 1 30 ? C24 LO7 501 A 1 HETATM 7 C C01 LO7 . . . C 2 20.508 63.245 10.948 1 30 ? C01 LO7 501 A 1 HETATM 8 C C02 LO7 . . . C 2 19.31 62.363 10.631 1 30 ? C02 LO7 501 A 1 HETATM 9 C C03 LO7 . . . C 2 18.161 63.28 10.351 1 30 ? C03 LO7 501 A 1 HETATM 10 C C04 LO7 . . . C 2 18.477 64.352 9.603 1 30 ? C04 LO7 501 A 1 HETATM 11 C C06 LO7 . . . C 2 16.351 65.128 9.752 1 30 ? C06 LO7 501 A 1 HETATM 12 C C07 LO7 . . . C 2 15.942 64.073 10.52 1 30 ? C07 LO7 501 A 1 HETATM 13 C C08 LO7 . . . C 2 16.884 63.119 10.84 1 30 ? C08 LO7 501 A 1 HETATM 14 C C09 LO7 . . . C 2 15.421 66.231 9.315 1 30 ? C09 LO7 501 A 1 HETATM 15 C C11 LO7 . . . C 2 13.958 65.81 9.079 1 30 ? C11 LO7 501 A 1 HETATM 16 C C14 LO7 . . . C 2 13.639 68.254 8.149 1 30 ? C14 LO7 501 A 1 HETATM 17 C C16 LO7 . . . C 2 14.37 70.35 9.016 1 30 ? C16 LO7 501 A 1 HETATM 18 C C18 LO7 . . . C 2 13.612 68.66 10.457 1 30 ? C18 LO7 501 A 1 HETATM 19 C C19 LO7 . . . C 2 14.912 71.745 8.736 1 30 ? C19 LO7 501 A 1 HETATM 20 N N05 LO7 . . . C 2 17.567 65.224 9.329 1 30 ? N05 LO7 501 A 1 HETATM 21 N N23 LO7 . . . C 2 16.641 74.514 10.451 1 30 ? N23 LO7 501 A 1 HETATM 22 O O10 LO7 . . . C 2 15.938 67.278 9.128 1 30 ? O10 LO7 501 A 1 HETATM 23 O O12 LO7 . . . C 2 12.931 66.584 9.615 1 30 ? O12 LO7 501 A 1 HETATM 24 O O22 LO7 . . . C 2 17.197 73.518 8.221 1 30 ? O22 LO7 501 A 1 HETATM 25 O O25 LO7 . . . C 2 15.864 74.215 12.73 1 30 ? O25 LO7 501 A 1 HETATM 26 S S26 LO7 . . . C 2 15.204 72.487 11.047 1 30 ? S26 LO7 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #