data_6O9B # _model_server_result.job_id Hq1AYvo4onp06di6EywIOQ _model_server_result.datetime_utc '2024-11-14 20:40:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6o9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":202}' # _entry.id 6O9B # _exptl.entry_id 6O9B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6O9B _cell.length_a 152.77 _cell.length_b 152.77 _cell.length_c 84.835 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 177 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 O N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 104 A CYS 101 1_555 A SG CYS 167 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? disulf ? disulf2 A SG CYS 206 A CYS 203 1_555 A SG CYS 262 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 45 B CYS 45 1_555 B SG CYS 100 B CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 237 n n O1 C6 MES sing 238 n n C2 C3 MES sing 239 n n C2 H21 MES sing 240 n n C2 H22 MES sing 241 n n C3 N4 MES sing 242 n n C3 H31 MES sing 243 n n C3 H32 MES sing 244 n n N4 C5 MES sing 245 n n N4 C7 MES sing 246 n n N4 HN4 MES sing 247 n n C5 C6 MES sing 248 n n C5 H51 MES sing 249 n n C5 H52 MES sing 250 n n C6 H61 MES sing 251 n n C6 H62 MES sing 252 n n C7 C8 MES sing 253 n n C7 H71 MES sing 254 n n C7 H72 MES sing 255 n n C8 S MES sing 256 n n C8 H81 MES sing 257 n n C8 H82 MES sing 258 n n S O1S MES doub 259 n n S O2S MES doub 260 n n S O3S MES sing 261 n n # _atom_sites.entry_id 6O9B _atom_sites.fract_transf_matrix[1][1] 0.006546 _atom_sites.fract_transf_matrix[1][2] 0.003779 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 PG4 A 1 301 2 PG4 PG4 . E 5 MES A 1 302 3 MES MES . F 6 IMD A 1 303 1 IMD IMD . G 6 IMD A 1 304 2 IMD IMD . H 7 PEG A 1 305 1 PEG PEG . I 7 PEG A 1 306 2 PEG PEG . J 8 EDO A 1 307 2 EDO EDO . K 8 EDO A 1 308 4 EDO EDO . L 8 EDO A 1 309 6 EDO EDO . M 8 EDO A 1 310 7 EDO EDO . N 4 PG4 B 1 201 1 PG4 PG4 . O 5 MES B 1 202 1 MES MES . P 5 MES B 1 203 2 MES MES . Q 7 PEG B 1 204 3 PEG PEG . R 7 PEG B 1 205 4 PEG PEG . S 8 EDO B 1 206 1 EDO EDO . T 8 EDO B 1 207 3 EDO EDO . U 8 EDO B 1 208 5 EDO EDO . V 9 HOH A 1 401 16 HOH HOH . V 9 HOH A 2 402 31 HOH HOH . V 9 HOH A 3 403 101 HOH HOH . V 9 HOH A 4 404 79 HOH HOH . V 9 HOH A 5 405 13 HOH HOH . V 9 HOH A 6 406 33 HOH HOH . V 9 HOH A 7 407 56 HOH HOH . V 9 HOH A 8 408 66 HOH HOH . V 9 HOH A 9 409 110 HOH HOH . V 9 HOH A 10 410 65 HOH HOH . V 9 HOH A 11 411 53 HOH HOH . V 9 HOH A 12 412 20 HOH HOH . V 9 HOH A 13 413 144 HOH HOH . V 9 HOH A 14 414 64 HOH HOH . V 9 HOH A 15 415 28 HOH HOH . V 9 HOH A 16 416 17 HOH HOH . V 9 HOH A 17 417 123 HOH HOH . V 9 HOH A 18 418 85 HOH HOH . V 9 HOH A 19 419 118 HOH HOH . V 9 HOH A 20 420 29 HOH HOH . V 9 HOH A 21 421 14 HOH HOH . V 9 HOH A 22 422 54 HOH HOH . V 9 HOH A 23 423 6 HOH HOH . V 9 HOH A 24 424 146 HOH HOH . V 9 HOH A 25 425 130 HOH HOH . V 9 HOH A 26 426 5 HOH HOH . V 9 HOH A 27 427 125 HOH HOH . V 9 HOH A 28 428 27 HOH HOH . V 9 HOH A 29 429 11 HOH HOH . V 9 HOH A 30 430 76 HOH HOH . V 9 HOH A 31 431 34 HOH HOH . V 9 HOH A 32 432 47 HOH HOH . V 9 HOH A 33 433 82 HOH HOH . V 9 HOH A 34 434 113 HOH HOH . V 9 HOH A 35 435 93 HOH HOH . V 9 HOH A 36 436 8 HOH HOH . V 9 HOH A 37 437 134 HOH HOH . V 9 HOH A 38 438 150 HOH HOH . V 9 HOH A 39 439 26 HOH HOH . V 9 HOH A 40 440 32 HOH HOH . V 9 HOH A 41 441 108 HOH HOH . V 9 HOH A 42 442 103 HOH HOH . V 9 HOH A 43 443 4 HOH HOH . V 9 HOH A 44 444 116 HOH HOH . V 9 HOH A 45 445 91 HOH HOH . V 9 HOH A 46 446 133 HOH HOH . V 9 HOH A 47 447 35 HOH HOH . V 9 HOH A 48 448 143 HOH HOH . V 9 HOH A 49 449 7 HOH HOH . V 9 HOH A 50 450 59 HOH HOH . V 9 HOH A 51 451 78 HOH HOH . V 9 HOH A 52 452 18 HOH HOH . V 9 HOH A 53 453 98 HOH HOH . V 9 HOH A 54 454 61 HOH HOH . V 9 HOH A 55 455 104 HOH HOH . V 9 HOH A 56 456 94 HOH HOH . V 9 HOH A 57 457 138 HOH HOH . V 9 HOH A 58 458 126 HOH HOH . V 9 HOH A 59 459 120 HOH HOH . V 9 HOH A 60 460 25 HOH HOH . V 9 HOH A 61 461 1 HOH HOH . V 9 HOH A 62 462 9 HOH HOH . V 9 HOH A 63 463 75 HOH HOH . V 9 HOH A 64 464 122 HOH HOH . V 9 HOH A 65 465 142 HOH HOH . V 9 HOH A 66 466 87 HOH HOH . V 9 HOH A 67 467 109 HOH HOH . V 9 HOH A 68 468 48 HOH HOH . V 9 HOH A 69 469 52 HOH HOH . V 9 HOH A 70 470 84 HOH HOH . V 9 HOH A 71 471 67 HOH HOH . V 9 HOH A 72 472 23 HOH HOH . V 9 HOH A 73 473 137 HOH HOH . V 9 HOH A 74 474 57 HOH HOH . V 9 HOH A 75 475 141 HOH HOH . V 9 HOH A 76 476 153 HOH HOH . V 9 HOH A 77 477 121 HOH HOH . V 9 HOH A 78 478 157 HOH HOH . V 9 HOH A 79 479 81 HOH HOH . V 9 HOH A 80 480 51 HOH HOH . V 9 HOH A 81 481 107 HOH HOH . V 9 HOH A 82 482 99 HOH HOH . V 9 HOH A 83 483 58 HOH HOH . V 9 HOH A 84 484 73 HOH HOH . V 9 HOH A 85 485 148 HOH HOH . V 9 HOH A 86 486 2 HOH HOH . V 9 HOH A 87 487 96 HOH HOH . V 9 HOH A 88 488 50 HOH HOH . V 9 HOH A 89 489 117 HOH HOH . V 9 HOH A 90 490 156 HOH HOH . V 9 HOH A 91 491 132 HOH HOH . V 9 HOH A 92 492 62 HOH HOH . V 9 HOH A 93 493 145 HOH HOH . V 9 HOH A 94 494 89 HOH HOH . V 9 HOH A 95 495 139 HOH HOH . V 9 HOH A 96 496 49 HOH HOH . V 9 HOH A 97 497 10 HOH HOH . V 9 HOH A 98 498 115 HOH HOH . V 9 HOH A 99 499 46 HOH HOH . V 9 HOH A 100 500 119 HOH HOH . V 9 HOH A 101 501 149 HOH HOH . V 9 HOH A 102 502 30 HOH HOH . V 9 HOH A 103 503 166 HOH HOH . V 9 HOH A 104 504 60 HOH HOH . V 9 HOH A 105 505 95 HOH HOH . V 9 HOH A 106 506 74 HOH HOH . V 9 HOH A 107 507 131 HOH HOH . V 9 HOH A 108 508 22 HOH HOH . V 9 HOH A 109 509 19 HOH HOH . V 9 HOH A 110 510 21 HOH HOH . V 9 HOH A 111 511 129 HOH HOH . V 9 HOH A 112 512 69 HOH HOH . V 9 HOH A 113 513 162 HOH HOH . V 9 HOH A 114 514 152 HOH HOH . V 9 HOH A 115 515 24 HOH HOH . V 9 HOH A 116 516 158 HOH HOH . V 9 HOH A 117 517 71 HOH HOH . W 9 HOH B 1 301 36 HOH HOH . W 9 HOH B 2 302 42 HOH HOH . W 9 HOH B 3 303 45 HOH HOH . W 9 HOH B 4 304 43 HOH HOH . W 9 HOH B 5 305 140 HOH HOH . W 9 HOH B 6 306 90 HOH HOH . W 9 HOH B 7 307 92 HOH HOH . W 9 HOH B 8 308 77 HOH HOH . W 9 HOH B 9 309 80 HOH HOH . W 9 HOH B 10 310 147 HOH HOH . W 9 HOH B 11 311 86 HOH HOH . W 9 HOH B 12 312 124 HOH HOH . W 9 HOH B 13 313 136 HOH HOH . W 9 HOH B 14 314 37 HOH HOH . W 9 HOH B 15 315 135 HOH HOH . W 9 HOH B 16 316 44 HOH HOH . W 9 HOH B 17 317 106 HOH HOH . W 9 HOH B 18 318 97 HOH HOH . W 9 HOH B 19 319 151 HOH HOH . W 9 HOH B 20 320 41 HOH HOH . W 9 HOH B 21 321 83 HOH HOH . W 9 HOH B 22 322 70 HOH HOH . W 9 HOH B 23 323 105 HOH HOH . W 9 HOH B 24 324 68 HOH HOH . W 9 HOH B 25 325 63 HOH HOH . W 9 HOH B 26 326 39 HOH HOH . W 9 HOH B 27 327 40 HOH HOH . W 9 HOH B 28 328 12 HOH HOH . W 9 HOH B 29 329 111 HOH HOH . W 9 HOH B 30 330 72 HOH HOH . W 9 HOH B 31 331 38 HOH HOH . W 9 HOH B 32 332 15 HOH HOH . W 9 HOH B 33 333 55 HOH HOH . W 9 HOH B 34 334 154 HOH HOH . W 9 HOH B 35 335 88 HOH HOH . W 9 HOH B 36 336 114 HOH HOH . W 9 HOH B 37 337 100 HOH HOH . W 9 HOH B 38 338 159 HOH HOH . W 9 HOH B 39 339 160 HOH HOH . W 9 HOH B 40 340 165 HOH HOH . W 9 HOH B 41 341 164 HOH HOH . W 9 HOH B 42 342 161 HOH HOH . W 9 HOH B 43 343 163 HOH HOH . X 9 HOH C 1 101 112 HOH HOH . X 9 HOH C 2 102 3 HOH HOH . X 9 HOH C 3 103 155 HOH HOH . X 9 HOH C 4 104 127 HOH HOH . X 9 HOH C 5 105 128 HOH HOH . X 9 HOH C 6 106 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . O 5 8.681 57 25.102 1 60.22 ? O1 MES 202 B 1 HETATM 2 C C2 MES . . . O 5 8.532 55.671 25.579 1 66.69 ? C2 MES 202 B 1 HETATM 3 C C3 MES . . . O 5 9.777 54.858 25.332 1 62.4 ? C3 MES 202 B 1 HETATM 4 N N4 MES . . . O 5 10.09 54.834 23.869 1 62.89 ? N4 MES 202 B 1 HETATM 5 C C5 MES . . . O 5 10.176 56.238 23.362 1 65.12 ? C5 MES 202 B 1 HETATM 6 C C6 MES . . . O 5 8.912 56.987 23.702 1 60.09 ? C6 MES 202 B 1 HETATM 7 C C7 MES . . . O 5 11.346 54.064 23.584 1 57.25 ? C7 MES 202 B 1 HETATM 8 C C8 MES . . . O 5 11.277 52.616 24.027 1 56.05 ? C8 MES 202 B 1 HETATM 9 S S MES . . . O 5 12.773 51.716 23.683 1 56.4 ? S MES 202 B 1 HETATM 10 O O1S MES . . . O 5 12.554 50.381 24.165 1 67.62 ? O1S MES 202 B 1 HETATM 11 O O2S MES . . . O 5 12.95 51.768 22.259 1 45.87 ? O2S MES 202 B 1 HETATM 12 O O3S MES . . . O 5 13.819 52.396 24.394 1 57.82 ? O3S MES 202 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #