data_6OAG # _model_server_result.job_id rU9YmNUKATZPwn2D8IvMDw _model_server_result.datetime_utc '2024-11-26 00:48:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6OAG # _exptl.entry_id 6OAG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 459.886 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OAG _cell.length_a 111.35 _cell.length_b 111.35 _cell.length_c 76.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.35 111.35 38.43 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C21 H19 Cl N3 O3 P S' _chem_comp.formula_weight 459.886 _chem_comp.id M2Y _chem_comp.mon_nstd_flag . _chem_comp.name '[(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OBD PBA M2Y doub 218 n n OBC PBA M2Y sing 219 n n PBA OBB M2Y sing 220 n n PBA CAB M2Y sing 221 n n CAB NAA M2Y sing 222 n n CAB CAL M2Y sing 223 n n NAA C4 M2Y sing 224 n n CAL CAT M2Y sing 225 n n C4 N3 M2Y doub 226 n y C4 C5 M2Y sing 227 n y N3 C2 M2Y sing 228 n y CAI C5 M2Y sing 229 n y CAI CAJ M2Y doub 230 n y C5 C6 M2Y doub 231 n y C2 N1 M2Y doub 232 n y CAJ CAM M2Y sing 233 n n CAJ SAK M2Y sing 234 n y CAR CAM M2Y doub 235 n y CAR CAQ M2Y sing 236 n y CAM CAN M2Y sing 237 n y C6 N1 M2Y sing 238 n y C6 SAK M2Y sing 239 n y CAQ CAP M2Y doub 240 n y CAT CAU M2Y doub 241 n y CAT CAY M2Y sing 242 n y CAN CAO M2Y doub 243 n y CAP CAO M2Y sing 244 n y CAP CAS M2Y sing 245 n n CAO CLAZ M2Y sing 246 n n CAU CAV M2Y sing 247 n y CAY CAX M2Y doub 248 n y CAV CAW M2Y doub 249 n y CAX CAW M2Y sing 250 n y CAN H1 M2Y sing 251 n n CAS H2 M2Y sing 252 n n CAS H3 M2Y sing 253 n n CAS H4 M2Y sing 254 n n CAQ H5 M2Y sing 255 n n CAR H6 M2Y sing 256 n n CAI H7 M2Y sing 257 n n C2 H8 M2Y sing 258 n n NAA H9 M2Y sing 259 n n CAB H10 M2Y sing 260 n n OBC H11 M2Y sing 261 n n OBB H12 M2Y sing 262 n n CAL H13 M2Y sing 263 n n CAL H14 M2Y sing 264 n n CAU H15 M2Y sing 265 n n CAV H16 M2Y sing 266 n n CAW H17 M2Y sing 267 n n CAX H18 M2Y sing 268 n n CAY H19 M2Y sing 269 n n # _atom_sites.entry_id 6OAG _atom_sites.fract_transf_matrix[1][1] 0.008981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 M2Y F 1 401 401 M2Y DRG . C 2 M2Y F 1 402 501 M2Y DRG . D 3 PO4 F 1 403 1 PO4 PO4 . E 4 HOH F 1 501 3 HOH HOH . E 4 HOH F 2 502 5 HOH HOH . E 4 HOH F 3 503 23 HOH HOH . E 4 HOH F 4 504 6 HOH HOH . E 4 HOH F 5 505 32 HOH HOH . E 4 HOH F 6 506 41 HOH HOH . E 4 HOH F 7 507 35 HOH HOH . E 4 HOH F 8 508 25 HOH HOH . E 4 HOH F 9 509 24 HOH HOH . E 4 HOH F 10 510 36 HOH HOH . E 4 HOH F 11 511 78 HOH HOH . E 4 HOH F 12 512 61 HOH HOH . E 4 HOH F 13 513 85 HOH HOH . E 4 HOH F 14 514 101 HOH HOH . E 4 HOH F 15 515 9 HOH HOH . E 4 HOH F 16 516 2 HOH HOH . E 4 HOH F 17 517 89 HOH HOH . E 4 HOH F 18 518 87 HOH HOH . E 4 HOH F 19 519 92 HOH HOH . E 4 HOH F 20 520 95 HOH HOH . E 4 HOH F 21 521 37 HOH HOH . E 4 HOH F 22 522 17 HOH HOH . E 4 HOH F 23 523 90 HOH HOH . E 4 HOH F 24 524 53 HOH HOH . E 4 HOH F 25 525 15 HOH HOH . E 4 HOH F 26 526 14 HOH HOH . E 4 HOH F 27 527 75 HOH HOH . E 4 HOH F 28 528 79 HOH HOH . E 4 HOH F 29 529 31 HOH HOH . E 4 HOH F 30 530 47 HOH HOH . E 4 HOH F 31 531 68 HOH HOH . E 4 HOH F 32 532 99 HOH HOH . E 4 HOH F 33 533 29 HOH HOH . E 4 HOH F 34 534 43 HOH HOH . E 4 HOH F 35 535 21 HOH HOH . E 4 HOH F 36 536 56 HOH HOH . E 4 HOH F 37 537 91 HOH HOH . E 4 HOH F 38 538 67 HOH HOH . E 4 HOH F 39 539 58 HOH HOH . E 4 HOH F 40 540 74 HOH HOH . E 4 HOH F 41 541 86 HOH HOH . E 4 HOH F 42 542 7 HOH HOH . E 4 HOH F 43 543 49 HOH HOH . E 4 HOH F 44 544 76 HOH HOH . E 4 HOH F 45 545 65 HOH HOH . E 4 HOH F 46 546 1 HOH HOH . E 4 HOH F 47 547 69 HOH HOH . E 4 HOH F 48 548 83 HOH HOH . E 4 HOH F 49 549 73 HOH HOH . E 4 HOH F 50 550 55 HOH HOH . E 4 HOH F 51 551 84 HOH HOH . E 4 HOH F 52 552 50 HOH HOH . E 4 HOH F 53 553 13 HOH HOH . E 4 HOH F 54 554 34 HOH HOH . E 4 HOH F 55 555 10 HOH HOH . E 4 HOH F 56 556 81 HOH HOH . E 4 HOH F 57 557 11 HOH HOH . E 4 HOH F 58 558 88 HOH HOH . E 4 HOH F 59 559 44 HOH HOH . E 4 HOH F 60 560 66 HOH HOH . E 4 HOH F 61 561 22 HOH HOH . E 4 HOH F 62 562 96 HOH HOH . E 4 HOH F 63 563 18 HOH HOH . E 4 HOH F 64 564 8 HOH HOH . E 4 HOH F 65 565 12 HOH HOH . E 4 HOH F 66 566 77 HOH HOH . E 4 HOH F 67 567 98 HOH HOH . E 4 HOH F 68 568 4 HOH HOH . E 4 HOH F 69 569 20 HOH HOH . E 4 HOH F 70 570 38 HOH HOH . E 4 HOH F 71 571 70 HOH HOH . E 4 HOH F 72 572 80 HOH HOH . E 4 HOH F 73 573 19 HOH HOH . E 4 HOH F 74 574 48 HOH HOH . E 4 HOH F 75 575 62 HOH HOH . E 4 HOH F 76 576 82 HOH HOH . E 4 HOH F 77 577 52 HOH HOH . E 4 HOH F 78 578 72 HOH HOH . E 4 HOH F 79 579 54 HOH HOH . E 4 HOH F 80 580 93 HOH HOH . E 4 HOH F 81 581 63 HOH HOH . E 4 HOH F 82 582 64 HOH HOH . E 4 HOH F 83 583 102 HOH HOH . E 4 HOH F 84 584 26 HOH HOH . E 4 HOH F 85 585 30 HOH HOH . E 4 HOH F 86 586 57 HOH HOH . E 4 HOH F 87 587 94 HOH HOH . E 4 HOH F 88 588 100 HOH HOH . E 4 HOH F 89 589 45 HOH HOH . E 4 HOH F 90 590 71 HOH HOH . E 4 HOH F 91 591 42 HOH HOH . E 4 HOH F 92 592 60 HOH HOH . E 4 HOH F 93 593 33 HOH HOH . E 4 HOH F 94 594 59 HOH HOH . E 4 HOH F 95 595 28 HOH HOH . E 4 HOH F 96 596 97 HOH HOH . E 4 HOH F 97 597 46 HOH HOH . E 4 HOH F 98 598 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 M2Y . . . C 2 -3.842 67.215 38.645 1 162.15 ? C4 M2Y 402 F 1 HETATM 2 C C5 M2Y . . . C 2 -4.786 68.173 38.484 1 168.55 ? C5 M2Y 402 F 1 HETATM 3 C C6 M2Y . . . C 2 -6.061 67.849 38.804 1 171.67 ? C6 M2Y 402 F 1 HETATM 4 N N1 M2Y . . . C 2 -6.408 66.632 39.264 1 167.11 ? N1 M2Y 402 F 1 HETATM 5 N N3 M2Y . . . C 2 -4.137 65.979 39.1 1 162.9 ? N3 M2Y 402 F 1 HETATM 6 C CAN M2Y . . . C 2 -7.281 71.816 37.054 1 156.7 ? CAN M2Y 402 F 1 HETATM 7 C CAO M2Y . . . C 2 -7.502 73.153 36.699 1 152.85 ? CAO M2Y 402 F 1 HETATM 8 CL CLAZ M2Y . . . C 2 -9.017 73.614 35.973 1 141.29 ? CLAZ M2Y 402 F 1 HETATM 9 C CAP M2Y . . . C 2 -6.518 74.116 36.923 1 147.74 ? CAP M2Y 402 F 1 HETATM 10 C CAS M2Y . . . C 2 -6.736 75.45 36.574 1 137.11 ? CAS M2Y 402 F 1 HETATM 11 C CAQ M2Y . . . C 2 -5.316 73.722 37.502 1 155.85 ? CAQ M2Y 402 F 1 HETATM 12 C CAR M2Y . . . C 2 -5.1 72.39 37.862 1 164.21 ? CAR M2Y 402 F 1 HETATM 13 C CAM M2Y . . . C 2 -6.07 71.409 37.637 1 163.85 ? CAM M2Y 402 F 1 HETATM 14 C CAJ M2Y . . . C 2 -5.85 70.126 38.005 1 167.7 ? CAJ M2Y 402 F 1 HETATM 15 S SAK M2Y . . . C 2 -6.982 69.145 38.536 1 169.3 ? SAK M2Y 402 F 1 HETATM 16 C CAI M2Y . . . C 2 -4.683 69.46 38.041 1 166.03 ? CAI M2Y 402 F 1 HETATM 17 C C2 M2Y . . . C 2 -5.444 65.646 39.429 1 159.11 ? C2 M2Y 402 F 1 HETATM 18 N NAA M2Y . . . C 2 -2.57 67.516 38.338 1 148.52 ? NAA M2Y 402 F 1 HETATM 19 C CAB M2Y . . . C 2 -1.451 66.62 38.701 1 131.81 ? CAB M2Y 402 F 1 HETATM 20 P PBA M2Y . . . C 2 -0.482 66.334 37.168 1 131.69 ? PBA M2Y 402 F 1 HETATM 21 O OBC M2Y . . . C 2 0.715 65.35 37.626 1 135.9 ? OBC M2Y 402 F 1 HETATM 22 O OBD M2Y . . . C 2 0.259 67.743 36.823 1 134.94 ? OBD M2Y 402 F 1 HETATM 23 O OBB M2Y . . . C 2 -1.286 65.82 36.031 1 127.16 ? OBB M2Y 402 F 1 HETATM 24 C CAL M2Y . . . C 2 -0.501 67.2 39.768 1 125.29 ? CAL M2Y 402 F 1 HETATM 25 C CAT M2Y . . . C 2 -1.125 67.943 40.773 1 123.28 ? CAT M2Y 402 F 1 HETATM 26 C CAU M2Y . . . C 2 -1.268 67.416 42.059 1 124.1 ? CAU M2Y 402 F 1 HETATM 27 C CAV M2Y . . . C 2 -1.876 68.179 43.056 1 127.7 ? CAV M2Y 402 F 1 HETATM 28 C CAW M2Y . . . C 2 -2.334 69.469 42.782 1 124.94 ? CAW M2Y 402 F 1 HETATM 29 C CAX M2Y . . . C 2 -2.182 70 41.504 1 123.33 ? CAX M2Y 402 F 1 HETATM 30 C CAY M2Y . . . C 2 -1.57 69.241 40.508 1 124.19 ? CAY M2Y 402 F 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #