data_6OAG # _model_server_result.job_id WzdUjJaUo5luWfVJhpxicA _model_server_result.datetime_utc '2024-11-05 08:27:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6OAG # _exptl.entry_id 6OAG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OAG _cell.length_a 111.35 _cell.length_b 111.35 _cell.length_c 76.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.35 111.35 38.43 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 312 n n P O2 PO4 sing 313 n n P O3 PO4 sing 314 n n P O4 PO4 sing 315 n n # _atom_sites.entry_id 6OAG _atom_sites.fract_transf_matrix[1][1] 0.008981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 M2Y F 1 401 401 M2Y DRG . C 2 M2Y F 1 402 501 M2Y DRG . D 3 PO4 F 1 403 1 PO4 PO4 . E 4 HOH F 1 501 3 HOH HOH . E 4 HOH F 2 502 5 HOH HOH . E 4 HOH F 3 503 23 HOH HOH . E 4 HOH F 4 504 6 HOH HOH . E 4 HOH F 5 505 32 HOH HOH . E 4 HOH F 6 506 41 HOH HOH . E 4 HOH F 7 507 35 HOH HOH . E 4 HOH F 8 508 25 HOH HOH . E 4 HOH F 9 509 24 HOH HOH . E 4 HOH F 10 510 36 HOH HOH . E 4 HOH F 11 511 78 HOH HOH . E 4 HOH F 12 512 61 HOH HOH . E 4 HOH F 13 513 85 HOH HOH . E 4 HOH F 14 514 101 HOH HOH . E 4 HOH F 15 515 9 HOH HOH . E 4 HOH F 16 516 2 HOH HOH . E 4 HOH F 17 517 89 HOH HOH . E 4 HOH F 18 518 87 HOH HOH . E 4 HOH F 19 519 92 HOH HOH . E 4 HOH F 20 520 95 HOH HOH . E 4 HOH F 21 521 37 HOH HOH . E 4 HOH F 22 522 17 HOH HOH . E 4 HOH F 23 523 90 HOH HOH . E 4 HOH F 24 524 53 HOH HOH . E 4 HOH F 25 525 15 HOH HOH . E 4 HOH F 26 526 14 HOH HOH . E 4 HOH F 27 527 75 HOH HOH . E 4 HOH F 28 528 79 HOH HOH . E 4 HOH F 29 529 31 HOH HOH . E 4 HOH F 30 530 47 HOH HOH . E 4 HOH F 31 531 68 HOH HOH . E 4 HOH F 32 532 99 HOH HOH . E 4 HOH F 33 533 29 HOH HOH . E 4 HOH F 34 534 43 HOH HOH . E 4 HOH F 35 535 21 HOH HOH . E 4 HOH F 36 536 56 HOH HOH . E 4 HOH F 37 537 91 HOH HOH . E 4 HOH F 38 538 67 HOH HOH . E 4 HOH F 39 539 58 HOH HOH . E 4 HOH F 40 540 74 HOH HOH . E 4 HOH F 41 541 86 HOH HOH . E 4 HOH F 42 542 7 HOH HOH . E 4 HOH F 43 543 49 HOH HOH . E 4 HOH F 44 544 76 HOH HOH . E 4 HOH F 45 545 65 HOH HOH . E 4 HOH F 46 546 1 HOH HOH . E 4 HOH F 47 547 69 HOH HOH . E 4 HOH F 48 548 83 HOH HOH . E 4 HOH F 49 549 73 HOH HOH . E 4 HOH F 50 550 55 HOH HOH . E 4 HOH F 51 551 84 HOH HOH . E 4 HOH F 52 552 50 HOH HOH . E 4 HOH F 53 553 13 HOH HOH . E 4 HOH F 54 554 34 HOH HOH . E 4 HOH F 55 555 10 HOH HOH . E 4 HOH F 56 556 81 HOH HOH . E 4 HOH F 57 557 11 HOH HOH . E 4 HOH F 58 558 88 HOH HOH . E 4 HOH F 59 559 44 HOH HOH . E 4 HOH F 60 560 66 HOH HOH . E 4 HOH F 61 561 22 HOH HOH . E 4 HOH F 62 562 96 HOH HOH . E 4 HOH F 63 563 18 HOH HOH . E 4 HOH F 64 564 8 HOH HOH . E 4 HOH F 65 565 12 HOH HOH . E 4 HOH F 66 566 77 HOH HOH . E 4 HOH F 67 567 98 HOH HOH . E 4 HOH F 68 568 4 HOH HOH . E 4 HOH F 69 569 20 HOH HOH . E 4 HOH F 70 570 38 HOH HOH . E 4 HOH F 71 571 70 HOH HOH . E 4 HOH F 72 572 80 HOH HOH . E 4 HOH F 73 573 19 HOH HOH . E 4 HOH F 74 574 48 HOH HOH . E 4 HOH F 75 575 62 HOH HOH . E 4 HOH F 76 576 82 HOH HOH . E 4 HOH F 77 577 52 HOH HOH . E 4 HOH F 78 578 72 HOH HOH . E 4 HOH F 79 579 54 HOH HOH . E 4 HOH F 80 580 93 HOH HOH . E 4 HOH F 81 581 63 HOH HOH . E 4 HOH F 82 582 64 HOH HOH . E 4 HOH F 83 583 102 HOH HOH . E 4 HOH F 84 584 26 HOH HOH . E 4 HOH F 85 585 30 HOH HOH . E 4 HOH F 86 586 57 HOH HOH . E 4 HOH F 87 587 94 HOH HOH . E 4 HOH F 88 588 100 HOH HOH . E 4 HOH F 89 589 45 HOH HOH . E 4 HOH F 90 590 71 HOH HOH . E 4 HOH F 91 591 42 HOH HOH . E 4 HOH F 92 592 60 HOH HOH . E 4 HOH F 93 593 33 HOH HOH . E 4 HOH F 94 594 59 HOH HOH . E 4 HOH F 95 595 28 HOH HOH . E 4 HOH F 96 596 97 HOH HOH . E 4 HOH F 97 597 46 HOH HOH . E 4 HOH F 98 598 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . A . D 3 9.331 75.12 22.656 0.5 83.27 ? P PO4 403 F 1 HETATM 2 P P PO4 . B . D 3 6.305 75.443 23.726 0.5 88.64 ? P PO4 403 F 1 HETATM 3 O O1 PO4 . A . D 3 8.244 75.627 21.722 0.5 75.21 ? O1 PO4 403 F 1 HETATM 4 O O1 PO4 . B . D 3 5.585 75.405 22.399 0.5 90.38 ? O1 PO4 403 F 1 HETATM 5 O O2 PO4 . A . D 3 10.485 76.111 22.693 0.5 83.48 ? O2 PO4 403 F 1 HETATM 6 O O2 PO4 . B . D 3 6.241 76.854 24.286 0.5 96.03 ? O2 PO4 403 F 1 HETATM 7 O O3 PO4 . A . D 3 8.755 74.978 24.061 0.5 82.56 ? O3 PO4 403 F 1 HETATM 8 O O3 PO4 . B . D 3 5.641 74.492 24.703 0.5 88.37 ? O3 PO4 403 F 1 HETATM 9 O O4 PO4 . A . D 3 9.842 73.772 22.151 0.5 79.16 ? O4 PO4 403 F 1 HETATM 10 O O4 PO4 . B . D 3 7.759 75.033 23.517 0.5 92.86 ? O4 PO4 403 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #