data_6OC1 # _model_server_result.job_id 8mSpJXfKrr3aEwOMcSZJMg _model_server_result.datetime_utc '2024-11-28 18:16:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6OC1 # _exptl.entry_id 6OC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OC1 _cell.length_a 113.668 _cell.length_b 113.668 _cell.length_c 113.668 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 339 n y N1 C6 ORO sing 340 n y N1 HN1 ORO sing 341 n n C2 O2 ORO doub 342 n n C2 N3 ORO sing 343 n y N3 C4 ORO sing 344 n y N3 HN3 ORO sing 345 n n C4 O4 ORO doub 346 n n C4 C5 ORO sing 347 n y C5 C6 ORO doub 348 n y C5 H5 ORO sing 349 n n C6 C7 ORO sing 350 n n C7 O71 ORO doub 351 n n C7 O72 ORO sing 352 n n O72 HO7 ORO sing 353 n n # _atom_sites.entry_id 6OC1 _atom_sites.fract_transf_matrix[1][1] 0.008798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008798 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ORO A 1 401 1 ORO ORO . C 3 FMN A 1 402 2 FMN FMN . D 4 PO4 A 1 403 3 PO4 PO4 . E 5 1SU A 1 404 1 1SU TAK . F 6 HOH A 1 501 36 HOH HOH . F 6 HOH A 2 502 18 HOH HOH . F 6 HOH A 3 503 12 HOH HOH . F 6 HOH A 4 504 17 HOH HOH . F 6 HOH A 5 505 14 HOH HOH . F 6 HOH A 6 506 2 HOH HOH . F 6 HOH A 7 507 33 HOH HOH . F 6 HOH A 8 508 29 HOH HOH . F 6 HOH A 9 509 34 HOH HOH . F 6 HOH A 10 510 1 HOH HOH . F 6 HOH A 11 511 19 HOH HOH . F 6 HOH A 12 512 5 HOH HOH . F 6 HOH A 13 513 26 HOH HOH . F 6 HOH A 14 514 27 HOH HOH . F 6 HOH A 15 515 22 HOH HOH . F 6 HOH A 16 516 28 HOH HOH . F 6 HOH A 17 517 21 HOH HOH . F 6 HOH A 18 518 10 HOH HOH . F 6 HOH A 19 519 15 HOH HOH . F 6 HOH A 20 520 24 HOH HOH . F 6 HOH A 21 521 7 HOH HOH . F 6 HOH A 22 522 31 HOH HOH . F 6 HOH A 23 523 23 HOH HOH . F 6 HOH A 24 524 3 HOH HOH . F 6 HOH A 25 525 6 HOH HOH . F 6 HOH A 26 526 32 HOH HOH . F 6 HOH A 27 527 8 HOH HOH . F 6 HOH A 28 528 35 HOH HOH . F 6 HOH A 29 529 9 HOH HOH . F 6 HOH A 30 530 20 HOH HOH . F 6 HOH A 31 531 30 HOH HOH . F 6 HOH A 32 532 25 HOH HOH . F 6 HOH A 33 533 4 HOH HOH . F 6 HOH A 34 534 16 HOH HOH . F 6 HOH A 35 535 11 HOH HOH . F 6 HOH A 36 536 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . B 2 -4.436 -20.755 -27.188 1 65.89 ? N1 ORO 401 A 1 HETATM 2 C C2 ORO . . . B 2 -4.553 -20.951 -28.544 1 61.85 ? C2 ORO 401 A 1 HETATM 3 O O2 ORO . . . B 2 -4.853 -22.033 -29.035 1 55.39 ? O2 ORO 401 A 1 HETATM 4 N N3 ORO . . . B 2 -4.312 -19.848 -29.325 1 64.74 ? N3 ORO 401 A 1 HETATM 5 C C4 ORO . . . B 2 -3.972 -18.591 -28.886 1 68.04 ? C4 ORO 401 A 1 HETATM 6 O O4 ORO . . . B 2 -3.785 -17.691 -29.711 1 71.04 ? O4 ORO 401 A 1 HETATM 7 C C5 ORO . . . B 2 -3.866 -18.452 -27.46 1 67.5 ? C5 ORO 401 A 1 HETATM 8 C C6 ORO . . . B 2 -4.102 -19.543 -26.651 1 65.24 ? C6 ORO 401 A 1 HETATM 9 C C7 ORO . . . B 2 -4.024 -19.487 -25.161 1 63.65 ? C7 ORO 401 A 1 HETATM 10 O O71 ORO . . . B 2 -3.323 -18.615 -24.682 1 60.76 ? O71 ORO 401 A 1 HETATM 11 O O72 ORO . . . B 2 -4.684 -20.302 -24.54 1 67.05 ? O72 ORO 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #