data_6OC1 # _model_server_result.job_id RwrZ_GzR-Iu6JDWdUBiqLQ _model_server_result.datetime_utc '2024-10-18 16:27:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6OC1 # _exptl.entry_id 6OC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OC1 _cell.length_a 113.668 _cell.length_b 113.668 _cell.length_c 113.668 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 131 n n N1 C10 FMN doub 132 n n C2 O2 FMN doub 133 n n C2 N3 FMN sing 134 n n N3 C4 FMN sing 135 n n N3 HN3 FMN sing 136 n n C4 O4 FMN doub 137 n n C4 C4A FMN sing 138 n n C4A N5 FMN doub 139 n n C4A C10 FMN sing 140 n n N5 C5A FMN sing 141 n n C5A C6 FMN doub 142 n y C5A C9A FMN sing 143 n y C6 C7 FMN sing 144 n y C6 H6 FMN sing 145 n n C7 C7M FMN sing 146 n n C7 C8 FMN doub 147 n y C7M HM71 FMN sing 148 n n C7M HM72 FMN sing 149 n n C7M HM73 FMN sing 150 n n C8 C8M FMN sing 151 n n C8 C9 FMN sing 152 n y C8M HM81 FMN sing 153 n n C8M HM82 FMN sing 154 n n C8M HM83 FMN sing 155 n n C9 C9A FMN doub 156 n y C9 H9 FMN sing 157 n n C9A N10 FMN sing 158 n n N10 C10 FMN sing 159 n n N10 C1' FMN sing 160 n n C1' C2' FMN sing 161 n n C1' "H1'1" FMN sing 162 n n C1' "H1'2" FMN sing 163 n n C2' O2' FMN sing 164 n n C2' C3' FMN sing 165 n n C2' H2' FMN sing 166 n n O2' HO2' FMN sing 167 n n C3' O3' FMN sing 168 n n C3' C4' FMN sing 169 n n C3' H3' FMN sing 170 n n O3' HO3' FMN sing 171 n n C4' O4' FMN sing 172 n n C4' C5' FMN sing 173 n n C4' H4' FMN sing 174 n n O4' HO4' FMN sing 175 n n C5' O5' FMN sing 176 n n C5' "H5'1" FMN sing 177 n n C5' "H5'2" FMN sing 178 n n O5' P FMN sing 179 n n P O1P FMN doub 180 n n P O2P FMN sing 181 n n P O3P FMN sing 182 n n O2P HOP2 FMN sing 183 n n O3P HOP3 FMN sing 184 n n # _atom_sites.entry_id 6OC1 _atom_sites.fract_transf_matrix[1][1] 0.008798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008798 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ORO A 1 401 1 ORO ORO . C 3 FMN A 1 402 2 FMN FMN . D 4 PO4 A 1 403 3 PO4 PO4 . E 5 1SU A 1 404 1 1SU TAK . F 6 HOH A 1 501 36 HOH HOH . F 6 HOH A 2 502 18 HOH HOH . F 6 HOH A 3 503 12 HOH HOH . F 6 HOH A 4 504 17 HOH HOH . F 6 HOH A 5 505 14 HOH HOH . F 6 HOH A 6 506 2 HOH HOH . F 6 HOH A 7 507 33 HOH HOH . F 6 HOH A 8 508 29 HOH HOH . F 6 HOH A 9 509 34 HOH HOH . F 6 HOH A 10 510 1 HOH HOH . F 6 HOH A 11 511 19 HOH HOH . F 6 HOH A 12 512 5 HOH HOH . F 6 HOH A 13 513 26 HOH HOH . F 6 HOH A 14 514 27 HOH HOH . F 6 HOH A 15 515 22 HOH HOH . F 6 HOH A 16 516 28 HOH HOH . F 6 HOH A 17 517 21 HOH HOH . F 6 HOH A 18 518 10 HOH HOH . F 6 HOH A 19 519 15 HOH HOH . F 6 HOH A 20 520 24 HOH HOH . F 6 HOH A 21 521 7 HOH HOH . F 6 HOH A 22 522 31 HOH HOH . F 6 HOH A 23 523 23 HOH HOH . F 6 HOH A 24 524 3 HOH HOH . F 6 HOH A 25 525 6 HOH HOH . F 6 HOH A 26 526 32 HOH HOH . F 6 HOH A 27 527 8 HOH HOH . F 6 HOH A 28 528 35 HOH HOH . F 6 HOH A 29 529 9 HOH HOH . F 6 HOH A 30 530 20 HOH HOH . F 6 HOH A 31 531 30 HOH HOH . F 6 HOH A 32 532 25 HOH HOH . F 6 HOH A 33 533 4 HOH HOH . F 6 HOH A 34 534 16 HOH HOH . F 6 HOH A 35 535 11 HOH HOH . F 6 HOH A 36 536 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . C 3 -1.361 -19.045 -30.952 1 49.59 ? N1 FMN 402 A 1 HETATM 2 C C2 FMN . . . C 3 -1.148 -17.739 -30.659 1 50.88 ? C2 FMN 402 A 1 HETATM 3 O O2 FMN . . . C 3 -1.307 -16.89 -31.563 1 55.23 ? O2 FMN 402 A 1 HETATM 4 N N3 FMN . . . C 3 -0.773 -17.317 -29.438 1 50.03 ? N3 FMN 402 A 1 HETATM 5 C C4 FMN . . . C 3 -0.584 -18.166 -28.42 1 49.85 ? C4 FMN 402 A 1 HETATM 6 O O4 FMN . . . C 3 -0.24 -17.749 -27.293 1 50.39 ? O4 FMN 402 A 1 HETATM 7 C C4A FMN . . . C 3 -0.796 -19.611 -28.655 1 49.44 ? C4A FMN 402 A 1 HETATM 8 N N5 FMN . . . C 3 -0.628 -20.528 -27.68 1 54.07 ? N5 FMN 402 A 1 HETATM 9 C C5A FMN . . . C 3 -0.823 -21.843 -27.924 1 52.62 ? C5A FMN 402 A 1 HETATM 10 C C6 FMN . . . C 3 -0.636 -22.76 -26.901 1 51.29 ? C6 FMN 402 A 1 HETATM 11 C C7 FMN . . . C 3 -0.836 -24.115 -27.129 1 51.23 ? C7 FMN 402 A 1 HETATM 12 C C7M FMN . . . C 3 -0.631 -25.104 -26.012 1 51.14 ? C7M FMN 402 A 1 HETATM 13 C C8 FMN . . . C 3 -1.246 -24.587 -28.473 1 52.07 ? C8 FMN 402 A 1 HETATM 14 C C8M FMN . . . C 3 -1.465 -26.054 -28.728 1 54.65 ? C8M FMN 402 A 1 HETATM 15 C C9 FMN . . . C 3 -1.435 -23.671 -29.499 1 53.6 ? C9 FMN 402 A 1 HETATM 16 C C9A FMN . . . C 3 -1.237 -22.312 -29.277 1 53.63 ? C9A FMN 402 A 1 HETATM 17 N N10 FMN . . . C 3 -1.418 -21.363 -30.31 1 51.59 ? N10 FMN 402 A 1 HETATM 18 C C10 FMN . . . C 3 -1.205 -20.006 -30.018 1 49.98 ? C10 FMN 402 A 1 HETATM 19 C C1' FMN . . . C 3 -1.833 -21.752 -31.66 1 50.05 ? C1' FMN 402 A 1 HETATM 20 C C2' FMN . . . C 3 -0.639 -22.112 -32.537 1 48.49 ? C2' FMN 402 A 1 HETATM 21 O O2' FMN . . . C 3 0.238 -20.988 -32.676 1 49.89 ? O2' FMN 402 A 1 HETATM 22 C C3' FMN . . . C 3 -1.14 -22.563 -33.903 1 49.69 ? C3' FMN 402 A 1 HETATM 23 O O3' FMN . . . C 3 -1.828 -21.48 -34.555 1 42 ? O3' FMN 402 A 1 HETATM 24 C C4' FMN . . . C 3 -2.071 -23.765 -33.737 1 54.56 ? C4' FMN 402 A 1 HETATM 25 O O4' FMN . . . C 3 -1.632 -24.578 -32.648 1 55.55 ? O4' FMN 402 A 1 HETATM 26 C C5' FMN . . . C 3 -2.118 -24.651 -34.972 1 59.49 ? C5' FMN 402 A 1 HETATM 27 O O5' FMN . . . C 3 -0.82 -25.18 -35.222 1 65.92 ? O5' FMN 402 A 1 HETATM 28 P P FMN . . . C 3 -0.416 -26.689 -34.841 1 67.71 ? P FMN 402 A 1 HETATM 29 O O1P FMN . . . C 3 0.688 -26.983 -35.842 1 66.62 ? O1P FMN 402 A 1 HETATM 30 O O2P FMN . . . C 3 0.027 -26.561 -33.404 1 65.98 ? O2P FMN 402 A 1 HETATM 31 O O3P FMN . . . C 3 -1.682 -27.499 -35.018 1 56.78 ? O3P FMN 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #