data_6OCJ # _model_server_result.job_id scQ__Wus8Smiy5l3Z8b9Sw _model_server_result.datetime_utc '2024-11-06 01:51:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ocj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6OCJ # _exptl.entry_id 6OCJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.308 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '(2S)-2-[4-(thiophene-2-carbonyl)phenyl]propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6OCJ _cell.length_a 95.261 _cell.length_b 95.261 _cell.length_c 144.533 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf4 A SG CYS 123 A CYS 123 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf5 A SG CYS 167 A CYS 167 1_555 A SG CYS 176 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? disulf ? disulf6 A SG CYS 199 A CYS 199 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf7 A SG CYS 244 A CYS 244 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? disulf ? disulf8 A SG CYS 264 A CYS 264 1_555 A SG CYS 278 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf9 A SG CYS 277 A CYS 277 1_555 A SG CYS 288 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf10 A SG CYS 315 A CYS 315 1_555 A SG CYS 360 A CYS 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf11 A SG CYS 359 A CYS 359 1_555 A SG CYS 368 A CYS 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf12 A SG CYS 391 A CYS 391 1_555 A SG CYS 437 A CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf13 A SG CYS 436 A CYS 436 1_555 A SG CYS 447 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf14 A SG CYS 460 A CYS 460 1_555 A SG CYS 476 A CYS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? disulf ? disulf15 A SG CYS 475 A CYS 475 1_555 A SG CYS 486 A CYS 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf16 A SG CYS 513 A CYS 513 1_555 A SG CYS 558 A CYS 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf17 A SG CYS 557 A CYS 557 1_555 A SG CYS 566 A CYS 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C14 H12 O3 S' _chem_comp.formula_weight 260.308 _chem_comp.id M5A _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[4-(thiophene-2-carbonyl)phenyl]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (S)-Suprofen # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C8 M5A doub 224 n n C8 O M5A sing 225 n n C8 C M5A sing 226 n n O2 C9 M5A doub 227 n n C3 C7 M5A doub 228 n y C3 C1 M5A sing 229 n y C7 C4 M5A sing 230 n y C C1 M5A sing 231 n n C C5 M5A sing 232 n n C1 C2 M5A doub 233 n y C9 C4 M5A sing 234 n n C9 C10 M5A sing 235 n n C4 C6 M5A doub 236 n y C2 C6 M5A sing 237 n y S C10 M5A sing 238 n y S C13 M5A sing 239 n y C10 C11 M5A doub 240 n y C11 C12 M5A sing 241 n y C13 C12 M5A doub 242 n y C11 H1 M5A sing 243 n n C12 H2 M5A sing 244 n n C13 H3 M5A sing 245 n n C6 H4 M5A sing 246 n n C2 H5 M5A sing 247 n n C7 H6 M5A sing 248 n n C3 H7 M5A sing 249 n n C H8 M5A sing 250 n n C5 H9 M5A sing 251 n n C5 H10 M5A sing 252 n n C5 H11 M5A sing 253 n n O H12 M5A sing 254 n n # _atom_sites.entry_id 6OCJ _atom_sites.fract_transf_matrix[1][1] 0.010497 _atom_sites.fract_transf_matrix[1][2] 0.006061 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 M5A A 1 601 1 M5A sup . C 3 MLI A 1 602 1 MLI MLI . D 4 SIN A 1 603 1 SIN SIN . E 5 ACT A 1 604 1 ACT ACT . F 6 HOH A 1 701 61 HOH HOH . F 6 HOH A 2 702 46 HOH HOH . F 6 HOH A 3 703 28 HOH HOH . F 6 HOH A 4 704 2 HOH HOH . F 6 HOH A 5 705 23 HOH HOH . F 6 HOH A 6 706 13 HOH HOH . F 6 HOH A 7 707 21 HOH HOH . F 6 HOH A 8 708 71 HOH HOH . F 6 HOH A 9 709 34 HOH HOH . F 6 HOH A 10 710 63 HOH HOH . F 6 HOH A 11 711 7 HOH HOH . F 6 HOH A 12 712 69 HOH HOH . F 6 HOH A 13 713 32 HOH HOH . F 6 HOH A 14 714 42 HOH HOH . F 6 HOH A 15 715 29 HOH HOH . F 6 HOH A 16 716 59 HOH HOH . F 6 HOH A 17 717 16 HOH HOH . F 6 HOH A 18 718 68 HOH HOH . F 6 HOH A 19 719 47 HOH HOH . F 6 HOH A 20 720 33 HOH HOH . F 6 HOH A 21 721 64 HOH HOH . F 6 HOH A 22 722 43 HOH HOH . F 6 HOH A 23 723 11 HOH HOH . F 6 HOH A 24 724 50 HOH HOH . F 6 HOH A 25 725 62 HOH HOH . F 6 HOH A 26 726 65 HOH HOH . F 6 HOH A 27 727 24 HOH HOH . F 6 HOH A 28 728 36 HOH HOH . F 6 HOH A 29 729 66 HOH HOH . F 6 HOH A 30 730 58 HOH HOH . F 6 HOH A 31 731 12 HOH HOH . F 6 HOH A 32 732 27 HOH HOH . F 6 HOH A 33 733 4 HOH HOH . F 6 HOH A 34 734 30 HOH HOH . F 6 HOH A 35 735 67 HOH HOH . F 6 HOH A 36 736 22 HOH HOH . F 6 HOH A 37 737 8 HOH HOH . F 6 HOH A 38 738 18 HOH HOH . F 6 HOH A 39 739 57 HOH HOH . F 6 HOH A 40 740 44 HOH HOH . F 6 HOH A 41 741 70 HOH HOH . F 6 HOH A 42 742 25 HOH HOH . F 6 HOH A 43 743 39 HOH HOH . F 6 HOH A 44 744 48 HOH HOH . F 6 HOH A 45 745 52 HOH HOH . F 6 HOH A 46 746 35 HOH HOH . F 6 HOH A 47 747 51 HOH HOH . F 6 HOH A 48 748 38 HOH HOH . F 6 HOH A 49 749 49 HOH HOH . F 6 HOH A 50 750 56 HOH HOH . F 6 HOH A 51 751 60 HOH HOH . F 6 HOH A 52 752 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 M5A . . . B 2 38.381 -0.797 69.47 1 49.44 ? O2 M5A 601 A 1 HETATM 2 C C9 M5A . . . B 2 38.177 0.007 68.574 1 56.66 ? C9 M5A 601 A 1 HETATM 3 C C10 M5A . . . B 2 39.398 0.423 67.894 1 47.37 ? C10 M5A 601 A 1 HETATM 4 C C11 M5A . . . B 2 39.75 1.133 66.774 1 44.8 ? C11 M5A 601 A 1 HETATM 5 C C12 M5A . . . B 2 41.134 1.127 66.695 1 59.52 ? C12 M5A 601 A 1 HETATM 6 C C13 M5A . . . B 2 41.811 0.442 67.706 1 58.91 ? C13 M5A 601 A 1 HETATM 7 S S M5A . . . B 2 40.682 -0.228 68.836 1 56.2 ? S M5A 601 A 1 HETATM 8 C C4 M5A . . . B 2 36.816 0.543 68.196 1 57.44 ? C4 M5A 601 A 1 HETATM 9 C C6 M5A . . . B 2 36.605 1.192 66.979 1 45.15 ? C6 M5A 601 A 1 HETATM 10 C C2 M5A . . . B 2 35.337 1.667 66.71 1 57.59 ? C2 M5A 601 A 1 HETATM 11 C C7 M5A . . . B 2 35.783 0.388 69.122 1 55.87 ? C7 M5A 601 A 1 HETATM 12 C C3 M5A . . . B 2 34.525 0.874 68.845 1 58.99 ? C3 M5A 601 A 1 HETATM 13 C C1 M5A . . . B 2 34.29 1.501 67.63 1 66.93 ? C1 M5A 601 A 1 HETATM 14 C C M5A . . . B 2 32.929 2.041 67.369 1 71.35 ? C M5A 601 A 1 HETATM 15 C C5 M5A . . . B 2 32.592 2.948 68.539 1 64.33 ? C5 M5A 601 A 1 HETATM 16 C C8 M5A . . . B 2 31.822 1.041 67.349 1 85.23 ? C8 M5A 601 A 1 HETATM 17 O O M5A . . . B 2 32.037 -0.171 67.6 1 87.49 ? O M5A 601 A 1 HETATM 18 O O1 M5A . . . B 2 30.691 1.524 67.099 1 96.25 ? O1 M5A 601 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #