data_6OEC # _model_server_result.job_id cYPbubFNxfR5RaNsign0Nw _model_server_result.datetime_utc '2024-10-19 16:23:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":301}' # _entry.id 6OEC # _exptl.entry_id 6OEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OEC _cell.length_a 133.197 _cell.length_b 169.723 _cell.length_c 122.028 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,M,N,T,U,V 1 1 D,E,F,O,P,W,X,Y 2 1 G,H,I,Q,R,Z,AA,BA 3 1 J,K,L,S,CA,DA,EA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 17 B ASP 13 1_555 M CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc2 B OD2 ASP 61 B ASP 57 1_555 M CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc3 B O GLU 63 B GLU 59 1_555 M CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc4 C OE2 GLU 16 C GLU 12 1_555 N CA CA . C CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc5 C OD1 ASP 17 C ASP 13 1_555 N CA CA . C CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc6 C OD2 ASP 61 C ASP 57 1_555 N CA CA . C CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.185 ? metalc ? metalc7 E OE2 GLU 16 E GLU 12 1_555 O CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc8 E OD1 ASP 17 E ASP 13 1_555 O CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? metalc ? metalc9 E OD2 ASP 61 E ASP 57 1_555 O CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc10 F OE2 GLU 16 F GLU 12 1_555 P CA CA . F CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.163 ? metalc ? metalc11 F OD1 ASP 17 F ASP 13 1_555 P CA CA . F CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc12 F OD2 ASP 61 F ASP 57 1_555 P CA CA . F CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc13 F O GLU 63 F GLU 59 1_555 P CA CA . F CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc14 G OE2 GLU 16 G GLU 12 1_555 Q CA CA . G CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc15 G OD1 ASP 17 G ASP 13 1_555 Q CA CA . G CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc16 G OD2 ASP 61 G ASP 57 1_555 Q CA CA . G CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc17 G O GLU 63 G GLU 59 1_555 Q CA CA . G CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.983 ? metalc ? metalc18 I OD1 ASP 17 I ASP 13 1_555 R CA CA . I CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc19 I OD2 ASP 61 I ASP 57 1_555 R CA CA . I CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc20 L OD1 ASP 17 L ASP 13 1_555 S CA CA . L CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc21 L O GLU 63 L GLU 59 1_555 S CA CA . L CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OEC _atom_sites.fract_transf_matrix[1][1] 0.007508 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 CA B 1 301 1 CA CA . N 2 CA C 1 301 1 CA CA . O 2 CA E 1 301 1 CA CA . P 2 CA F 1 301 1 CA CA . Q 2 CA G 1 301 1 CA CA . R 2 CA I 1 301 1 CA CA . S 2 CA L 1 301 1 CA CA . T 3 HOH A 1 301 44 HOH HOH . T 3 HOH A 2 302 45 HOH HOH . T 3 HOH A 3 303 47 HOH HOH . T 3 HOH A 4 304 3 HOH HOH . T 3 HOH A 5 305 43 HOH HOH . T 3 HOH A 6 306 1 HOH HOH . T 3 HOH A 7 307 46 HOH HOH . T 3 HOH A 8 308 48 HOH HOH . T 3 HOH A 9 309 6 HOH HOH . T 3 HOH A 10 310 5 HOH HOH . U 3 HOH B 1 401 49 HOH HOH . U 3 HOH B 2 402 50 HOH HOH . U 3 HOH B 3 403 8 HOH HOH . U 3 HOH B 4 404 4 HOH HOH . U 3 HOH B 5 405 9 HOH HOH . U 3 HOH B 6 406 2 HOH HOH . V 3 HOH C 1 401 11 HOH HOH . W 3 HOH D 1 301 12 HOH HOH . W 3 HOH D 2 302 13 HOH HOH . W 3 HOH D 3 303 15 HOH HOH . W 3 HOH D 4 304 14 HOH HOH . X 3 HOH E 1 401 17 HOH HOH . X 3 HOH E 2 402 24 HOH HOH . X 3 HOH E 3 403 22 HOH HOH . X 3 HOH E 4 404 21 HOH HOH . X 3 HOH E 5 405 23 HOH HOH . X 3 HOH E 6 406 19 HOH HOH . X 3 HOH E 7 407 20 HOH HOH . Y 3 HOH F 1 401 16 HOH HOH . Z 3 HOH G 1 401 28 HOH HOH . Z 3 HOH G 2 402 26 HOH HOH . Z 3 HOH G 3 403 27 HOH HOH . Z 3 HOH G 4 404 29 HOH HOH . Z 3 HOH G 5 405 39 HOH HOH . Z 3 HOH G 6 406 33 HOH HOH . AA 3 HOH H 1 301 30 HOH HOH . BA 3 HOH I 1 401 31 HOH HOH . BA 3 HOH I 2 402 32 HOH HOH . CA 3 HOH J 1 301 34 HOH HOH . CA 3 HOH J 2 302 35 HOH HOH . CA 3 HOH J 3 303 36 HOH HOH . DA 3 HOH K 1 301 42 HOH HOH . EA 3 HOH L 1 401 38 HOH HOH . EA 3 HOH L 2 402 37 HOH HOH . EA 3 HOH L 3 403 40 HOH HOH . EA 3 HOH L 4 404 41 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 2 _atom_site.Cartn_x -51.373 _atom_site.Cartn_y 67.85 _atom_site.Cartn_z -72.929 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #