data_6OG0 # _model_server_result.job_id FEAg4461oYReboEa5cQjyQ _model_server_result.datetime_utc '2024-10-19 19:26:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6og0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6OG0 # _exptl.entry_id 6OG0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.73 _cell.angle_gamma 90 _cell.entry_id 6OG0 _cell.length_a 55.775 _cell.length_b 43.046 _cell.length_c 48.416 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OG0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 18 A CYS 18 1_555 A SG CYS 49 A CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 45 A CYS 45 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf3 A SG CYS 88 A CYS 88 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A OE1 GLU 9 A GLU 9 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc2 A OE2 GLU 9 A GLU 9 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A OD1 ASP 41 A ASP 41 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc4 A NE2 HIS 99 A HIS 99 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc5 C CD CD . A CD 202 1_555 F O HOH . A HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc6 A OE1 GLU 39 A GLU 39 1_555 B CD CD . A CD 201 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc7 A OE2 GLU 39 A GLU 39 1_555 B CD CD . A CD 201 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc8 A OD1 ASP 66 A ASP 66 1_555 C CD CD . A CD 202 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc9 A OD2 ASP 66 A ASP 66 1_555 C CD CD . A CD 202 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc10 A NE2 HIS 70 A HIS 70 1_555 C CD CD . A CD 202 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc11 A OE1 GLU 80 A GLU 80 1_555 B CD CD . A CD 201 3_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc12 A OE2 GLU 80 A GLU 80 1_555 B CD CD . A CD 201 3_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OG0 _atom_sites.fract_transf_matrix[1][1] 0.017929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000542 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 201 2 CD CD . C 2 CD A 1 202 3 CD CD . D 2 CD A 1 203 4 CD CD . E 3 CL A 1 204 1 CL CL . F 4 HOH A 1 301 162 HOH HOH . F 4 HOH A 2 302 115 HOH HOH . F 4 HOH A 3 303 69 HOH HOH . F 4 HOH A 4 304 53 HOH HOH . F 4 HOH A 5 305 3 HOH HOH . F 4 HOH A 6 306 22 HOH HOH . F 4 HOH A 7 307 112 HOH HOH . F 4 HOH A 8 308 52 HOH HOH . F 4 HOH A 9 309 1 HOH HOH . F 4 HOH A 10 310 104 HOH HOH . F 4 HOH A 11 311 48 HOH HOH . F 4 HOH A 12 312 49 HOH HOH . F 4 HOH A 13 313 122 HOH HOH . F 4 HOH A 14 314 136 HOH HOH . F 4 HOH A 15 315 163 HOH HOH . F 4 HOH A 16 316 155 HOH HOH . F 4 HOH A 17 317 37 HOH HOH . F 4 HOH A 18 318 110 HOH HOH . F 4 HOH A 19 319 24 HOH HOH . F 4 HOH A 20 320 41 HOH HOH . F 4 HOH A 21 321 96 HOH HOH . F 4 HOH A 22 322 152 HOH HOH . F 4 HOH A 23 323 28 HOH HOH . F 4 HOH A 24 324 154 HOH HOH . F 4 HOH A 25 325 81 HOH HOH . F 4 HOH A 26 326 33 HOH HOH . F 4 HOH A 27 327 131 HOH HOH . F 4 HOH A 28 328 119 HOH HOH . F 4 HOH A 29 329 21 HOH HOH . F 4 HOH A 30 330 10 HOH HOH . F 4 HOH A 31 331 51 HOH HOH . F 4 HOH A 32 332 47 HOH HOH . F 4 HOH A 33 333 35 HOH HOH . F 4 HOH A 34 334 167 HOH HOH . F 4 HOH A 35 335 64 HOH HOH . F 4 HOH A 36 336 128 HOH HOH . F 4 HOH A 37 337 27 HOH HOH . F 4 HOH A 38 338 146 HOH HOH . F 4 HOH A 39 339 14 HOH HOH . F 4 HOH A 40 340 175 HOH HOH . F 4 HOH A 41 341 171 HOH HOH . F 4 HOH A 42 342 125 HOH HOH . F 4 HOH A 43 343 67 HOH HOH . F 4 HOH A 44 344 19 HOH HOH . F 4 HOH A 45 345 58 HOH HOH . F 4 HOH A 46 346 160 HOH HOH . F 4 HOH A 47 347 11 HOH HOH . F 4 HOH A 48 348 129 HOH HOH . F 4 HOH A 49 349 172 HOH HOH . F 4 HOH A 50 350 39 HOH HOH . F 4 HOH A 51 351 65 HOH HOH . F 4 HOH A 52 352 153 HOH HOH . F 4 HOH A 53 353 43 HOH HOH . F 4 HOH A 54 354 6 HOH HOH . F 4 HOH A 55 355 63 HOH HOH . F 4 HOH A 56 356 36 HOH HOH . F 4 HOH A 57 357 26 HOH HOH . F 4 HOH A 58 358 117 HOH HOH . F 4 HOH A 59 359 13 HOH HOH . F 4 HOH A 60 360 8 HOH HOH . F 4 HOH A 61 361 29 HOH HOH . F 4 HOH A 62 362 144 HOH HOH . F 4 HOH A 63 363 34 HOH HOH . F 4 HOH A 64 364 17 HOH HOH . F 4 HOH A 65 365 9 HOH HOH . F 4 HOH A 66 366 120 HOH HOH . F 4 HOH A 67 367 132 HOH HOH . F 4 HOH A 68 368 161 HOH HOH . F 4 HOH A 69 369 40 HOH HOH . F 4 HOH A 70 370 5 HOH HOH . F 4 HOH A 71 371 30 HOH HOH . F 4 HOH A 72 372 168 HOH HOH . F 4 HOH A 73 373 46 HOH HOH . F 4 HOH A 74 374 2 HOH HOH . F 4 HOH A 75 375 165 HOH HOH . F 4 HOH A 76 376 4 HOH HOH . F 4 HOH A 77 377 173 HOH HOH . F 4 HOH A 78 378 25 HOH HOH . F 4 HOH A 79 379 148 HOH HOH . F 4 HOH A 80 380 133 HOH HOH . F 4 HOH A 81 381 18 HOH HOH . F 4 HOH A 82 382 170 HOH HOH . F 4 HOH A 83 383 107 HOH HOH . F 4 HOH A 84 384 66 HOH HOH . F 4 HOH A 85 385 166 HOH HOH . F 4 HOH A 86 386 23 HOH HOH . F 4 HOH A 87 387 38 HOH HOH . F 4 HOH A 88 388 15 HOH HOH . F 4 HOH A 89 389 158 HOH HOH . F 4 HOH A 90 390 57 HOH HOH . F 4 HOH A 91 391 79 HOH HOH . F 4 HOH A 92 392 32 HOH HOH . F 4 HOH A 93 393 169 HOH HOH . F 4 HOH A 94 394 85 HOH HOH . F 4 HOH A 95 395 44 HOH HOH . F 4 HOH A 96 396 94 HOH HOH . F 4 HOH A 97 397 157 HOH HOH . F 4 HOH A 98 398 174 HOH HOH . F 4 HOH A 99 399 82 HOH HOH . F 4 HOH A 100 400 105 HOH HOH . F 4 HOH A 101 401 83 HOH HOH . F 4 HOH A 102 402 101 HOH HOH . F 4 HOH A 103 403 109 HOH HOH . F 4 HOH A 104 404 91 HOH HOH . F 4 HOH A 105 405 42 HOH HOH . F 4 HOH A 106 406 73 HOH HOH . F 4 HOH A 107 407 76 HOH HOH . F 4 HOH A 108 408 113 HOH HOH . F 4 HOH A 109 409 121 HOH HOH . F 4 HOH A 110 410 103 HOH HOH . F 4 HOH A 111 411 156 HOH HOH . F 4 HOH A 112 412 140 HOH HOH . F 4 HOH A 113 413 77 HOH HOH . F 4 HOH A 114 414 159 HOH HOH . F 4 HOH A 115 415 106 HOH HOH . F 4 HOH A 116 416 84 HOH HOH . F 4 HOH A 117 417 124 HOH HOH . F 4 HOH A 118 418 55 HOH HOH . F 4 HOH A 119 419 123 HOH HOH . F 4 HOH A 120 420 7 HOH HOH . F 4 HOH A 121 421 147 HOH HOH . F 4 HOH A 122 422 114 HOH HOH . F 4 HOH A 123 423 145 HOH HOH . F 4 HOH A 124 424 78 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 32.469 _atom_site.Cartn_y 31.758 _atom_site.Cartn_z 3.869 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #