data_6OGH # _model_server_result.job_id nYryr6mEen_SWE23MCLBCg _model_server_result.datetime_utc '2024-11-25 02:06:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ogh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6OGH # _exptl.entry_id 6OGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.78 _cell.angle_gamma 90 _cell.entry_id 6OGH _cell.length_a 55.964 _cell.length_b 42.843 _cell.length_c 49.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 18 A CYS 18 1_555 A SG CYS 49 A CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? disulf ? disulf2 A SG CYS 45 A CYS 45 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? disulf ? disulf3 A SG CYS 88 A CYS 88 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc1 A OE1 GLU 9 A GLU 9 1_555 C CD CD . A CD 202 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 A OE2 GLU 9 A GLU 9 1_555 C CD CD . A CD 202 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc3 A OE1 GLU 39 A GLU 39 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc4 A OE2 GLU 39 A GLU 39 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc5 A OD1 ASP 41 A ASP 41 1_555 B CD CD . A CD 201 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc6 A OD2 ASP 41 A ASP 41 1_555 B CD CD . A CD 201 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc7 A OD1 ASP 66 A ASP 66 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc8 A OD2 ASP 66 A ASP 66 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc9 A NE2 HIS 70 A HIS 70 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc10 A ND1 HIS 74 A HIS 74 1_555 D CO CO . A CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc11 A OE1 GLU 80 A GLU 80 1_555 B CD CD . A CD 201 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc12 A OE2 GLU 80 A GLU 80 1_555 B CD CD . A CD 201 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc13 A NE2 HIS 99 A HIS 99 1_555 B CD CD . A CD 201 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc14 A OD1 ASP 123 A ASP 123 1_555 D CO CO . A CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc15 A OD2 ASP 123 A ASP 123 1_555 D CO CO . A CO 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc16 C CD CD . A CD 202 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc17 D CO CO . A CO 203 1_555 G O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc18 D CO CO . A CO 203 1_555 G O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc19 D CO CO . A CO 203 1_555 G O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OGH _atom_sites.fract_transf_matrix[1][1] 0.017869 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000868 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 201 1 CD CD . C 2 CD A 1 202 2 CD CD . D 3 CO A 1 203 2 CO CO . E 4 EIC A 1 204 1 EIC EIC . F 5 EPE A 1 205 1 EPE EPE . G 6 HOH A 1 301 237 HOH HOH . G 6 HOH A 2 302 148 HOH HOH . G 6 HOH A 3 303 115 HOH HOH . G 6 HOH A 4 304 105 HOH HOH . G 6 HOH A 5 305 223 HOH HOH . G 6 HOH A 6 306 143 HOH HOH . G 6 HOH A 7 307 5 HOH HOH . G 6 HOH A 8 308 141 HOH HOH . G 6 HOH A 9 309 19 HOH HOH . G 6 HOH A 10 310 160 HOH HOH . G 6 HOH A 11 311 24 HOH HOH . G 6 HOH A 12 312 197 HOH HOH . G 6 HOH A 13 313 145 HOH HOH . G 6 HOH A 14 314 112 HOH HOH . G 6 HOH A 15 315 196 HOH HOH . G 6 HOH A 16 316 157 HOH HOH . G 6 HOH A 17 317 205 HOH HOH . G 6 HOH A 18 318 12 HOH HOH . G 6 HOH A 19 319 154 HOH HOH . G 6 HOH A 20 320 152 HOH HOH . G 6 HOH A 21 321 22 HOH HOH . G 6 HOH A 22 322 18 HOH HOH . G 6 HOH A 23 323 189 HOH HOH . G 6 HOH A 24 324 214 HOH HOH . G 6 HOH A 25 325 185 HOH HOH . G 6 HOH A 26 326 144 HOH HOH . G 6 HOH A 27 327 229 HOH HOH . G 6 HOH A 28 328 231 HOH HOH . G 6 HOH A 29 329 101 HOH HOH . G 6 HOH A 30 330 122 HOH HOH . G 6 HOH A 31 331 219 HOH HOH . G 6 HOH A 32 332 213 HOH HOH . G 6 HOH A 33 333 33 HOH HOH . G 6 HOH A 34 334 27 HOH HOH . G 6 HOH A 35 335 99 HOH HOH . G 6 HOH A 36 336 173 HOH HOH . G 6 HOH A 37 337 76 HOH HOH . G 6 HOH A 38 338 235 HOH HOH . G 6 HOH A 39 339 70 HOH HOH . G 6 HOH A 40 340 216 HOH HOH . G 6 HOH A 41 341 228 HOH HOH . G 6 HOH A 42 342 110 HOH HOH . G 6 HOH A 43 343 73 HOH HOH . G 6 HOH A 44 344 150 HOH HOH . G 6 HOH A 45 345 98 HOH HOH . G 6 HOH A 46 346 1 HOH HOH . G 6 HOH A 47 347 181 HOH HOH . G 6 HOH A 48 348 114 HOH HOH . G 6 HOH A 49 349 48 HOH HOH . G 6 HOH A 50 350 13 HOH HOH . G 6 HOH A 51 351 21 HOH HOH . G 6 HOH A 52 352 108 HOH HOH . G 6 HOH A 53 353 194 HOH HOH . G 6 HOH A 54 354 187 HOH HOH . G 6 HOH A 55 355 234 HOH HOH . G 6 HOH A 56 356 41 HOH HOH . G 6 HOH A 57 357 212 HOH HOH . G 6 HOH A 58 358 106 HOH HOH . G 6 HOH A 59 359 53 HOH HOH . G 6 HOH A 60 360 167 HOH HOH . G 6 HOH A 61 361 3 HOH HOH . G 6 HOH A 62 362 4 HOH HOH . G 6 HOH A 63 363 9 HOH HOH . G 6 HOH A 64 364 139 HOH HOH . G 6 HOH A 65 365 104 HOH HOH . G 6 HOH A 66 366 49 HOH HOH . G 6 HOH A 67 367 26 HOH HOH . G 6 HOH A 68 368 68 HOH HOH . G 6 HOH A 69 369 188 HOH HOH . G 6 HOH A 70 370 15 HOH HOH . G 6 HOH A 71 371 32 HOH HOH . G 6 HOH A 72 372 124 HOH HOH . G 6 HOH A 73 373 233 HOH HOH . G 6 HOH A 74 374 45 HOH HOH . G 6 HOH A 75 375 147 HOH HOH . G 6 HOH A 76 376 2 HOH HOH . G 6 HOH A 77 377 130 HOH HOH . G 6 HOH A 78 378 170 HOH HOH . G 6 HOH A 79 379 123 HOH HOH . G 6 HOH A 80 380 97 HOH HOH . G 6 HOH A 81 381 35 HOH HOH . G 6 HOH A 82 382 202 HOH HOH . G 6 HOH A 83 383 198 HOH HOH . G 6 HOH A 84 384 7 HOH HOH . G 6 HOH A 85 385 28 HOH HOH . G 6 HOH A 86 386 191 HOH HOH . G 6 HOH A 87 387 43 HOH HOH . G 6 HOH A 88 388 103 HOH HOH . G 6 HOH A 89 389 88 HOH HOH . G 6 HOH A 90 390 10 HOH HOH . G 6 HOH A 91 391 230 HOH HOH . G 6 HOH A 92 392 62 HOH HOH . G 6 HOH A 93 393 36 HOH HOH . G 6 HOH A 94 394 206 HOH HOH . G 6 HOH A 95 395 14 HOH HOH . G 6 HOH A 96 396 23 HOH HOH . G 6 HOH A 97 397 117 HOH HOH . G 6 HOH A 98 398 184 HOH HOH . G 6 HOH A 99 399 199 HOH HOH . G 6 HOH A 100 400 8 HOH HOH . G 6 HOH A 101 401 100 HOH HOH . G 6 HOH A 102 402 102 HOH HOH . G 6 HOH A 103 403 169 HOH HOH . G 6 HOH A 104 404 135 HOH HOH . G 6 HOH A 105 405 133 HOH HOH . G 6 HOH A 106 406 159 HOH HOH . G 6 HOH A 107 407 20 HOH HOH . G 6 HOH A 108 408 136 HOH HOH . G 6 HOH A 109 409 39 HOH HOH . G 6 HOH A 110 410 178 HOH HOH . G 6 HOH A 111 411 82 HOH HOH . G 6 HOH A 112 412 162 HOH HOH . G 6 HOH A 113 413 158 HOH HOH . G 6 HOH A 114 414 232 HOH HOH . G 6 HOH A 115 415 116 HOH HOH . G 6 HOH A 116 416 30 HOH HOH . G 6 HOH A 117 417 174 HOH HOH . G 6 HOH A 118 418 58 HOH HOH . G 6 HOH A 119 419 118 HOH HOH . G 6 HOH A 120 420 183 HOH HOH . G 6 HOH A 121 421 132 HOH HOH . G 6 HOH A 122 422 120 HOH HOH . G 6 HOH A 123 423 109 HOH HOH . G 6 HOH A 124 424 107 HOH HOH . G 6 HOH A 125 425 131 HOH HOH . G 6 HOH A 126 426 215 HOH HOH . G 6 HOH A 127 427 236 HOH HOH . G 6 HOH A 128 428 146 HOH HOH . G 6 HOH A 129 429 220 HOH HOH . G 6 HOH A 130 430 134 HOH HOH . G 6 HOH A 131 431 209 HOH HOH . G 6 HOH A 132 432 140 HOH HOH . G 6 HOH A 133 433 201 HOH HOH . G 6 HOH A 134 434 31 HOH HOH . G 6 HOH A 135 435 195 HOH HOH . G 6 HOH A 136 436 40 HOH HOH . G 6 HOH A 137 437 176 HOH HOH . G 6 HOH A 138 438 207 HOH HOH . G 6 HOH A 139 439 182 HOH HOH . G 6 HOH A 140 440 204 HOH HOH . G 6 HOH A 141 441 211 HOH HOH . G 6 HOH A 142 442 111 HOH HOH . G 6 HOH A 143 443 186 HOH HOH . G 6 HOH A 144 444 224 HOH HOH . G 6 HOH A 145 445 217 HOH HOH . G 6 HOH A 146 446 203 HOH HOH . G 6 HOH A 147 447 121 HOH HOH . G 6 HOH A 148 448 210 HOH HOH . G 6 HOH A 149 449 151 HOH HOH . G 6 HOH A 150 450 208 HOH HOH . G 6 HOH A 151 451 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.353 _atom_site.Cartn_y 1.892 _atom_site.Cartn_z 6.561 _atom_site.occupancy 0.96 _atom_site.B_iso_or_equiv 20.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #