data_6OGQ
#
_model_server_result.job_id            wMoadOxygXtC97Pneg1D4g 
_model_server_result.datetime_utc      '2024-11-28 22:06:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ogq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":103}' 
#
_entry.id    6OGQ 
#
_exptl.entry_id    6OGQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              688.83 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(4-fluorophenyl)-3-hydroxybutan-2-yl]carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6OGQ 
_cell.length_a            62.823 
_cell.length_b            62.823 
_cell.length_c            82.154 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OGQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 27.384667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C33 H41 F N4 O7 S2' 
_chem_comp.formula_weight    688.83 
_chem_comp.id                JDV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(4-fluorophenyl)-3-hydroxybutan-2-yl]carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CBO CBG JDV sing 186 n n 
CBO CBN JDV sing 187 n n 
CBG NBF JDV sing 188 n n 
CBG CBN JDV sing 189 n n 
NBF CBD JDV sing 190 n n 
CBD NBE JDV doub 191 n y 
CBD SBC JDV sing 192 n y 
NBE CAZ JDV sing 193 n y 
SBC CAY JDV sing 194 n y 
CAZ CBA JDV doub 195 n y 
CAZ CAY JDV sing 196 n y 
CBA CBB JDV sing 197 n y 
CAY CAX JDV doub 198 n y 
CBB CAS JDV doub 199 n y 
CAX CAS JDV sing 200 n y 
CAS SAR JDV sing 201 n n 
SAR OAU JDV doub 202 n n 
SAR OAV JDV doub 203 n n 
SAR NAQ JDV sing 204 n n 
CBQ NAQ JDV sing 205 n n 
CBQ CBR JDV sing 206 n n 
NAQ CAP JDV sing 207 n n 
CAP CAT JDV sing 208 n n 
CBT CBR JDV sing 209 n n 
CBR CBS JDV sing 210 n n 
CAW CAO JDV sing 211 n n 
CAW CBH JDV sing 212 n n 
CAT OBP JDV sing 213 n n 
CAT CAO JDV sing 214 n n 
CBM CBH JDV doub 215 n y 
CBM CBL JDV sing 216 n y 
CAO NAN JDV sing 217 n n 
CBH CBI JDV sing 218 n y 
CBL CBK JDV doub 219 n y 
CBI CBJ JDV doub 220 n y 
CBK CBJ JDV sing 221 n y 
CBK FBU JDV sing 222 n n 
NAN CAL JDV sing 223 n n 
OAM CAL JDV doub 224 n n 
CAL OAK JDV sing 225 n n 
OAK CAF JDV sing 226 n n 
CAF CAD JDV sing 227 n n 
CAF CAG JDV sing 228 n n 
CAC CAD JDV sing 229 n n 
CAC OAB JDV sing 230 n n 
CAD CAE JDV sing 231 n n 
CAG CAJ JDV sing 232 n n 
CAG CAH JDV sing 233 n n 
OAB CAA JDV sing 234 n n 
CAJ OAI JDV sing 235 n n 
CAE CAH JDV sing 236 n n 
CAE CAA JDV sing 237 n n 
CAA OAI JDV sing 238 n n 
CAA HAA JDV sing 239 n n 
CAC HAD JDV sing 240 n n 
CAC HAC JDV sing 241 n n 
CAD HAE JDV sing 242 n n 
CAE HAF JDV sing 243 n n 
CAF HAG JDV sing 244 n n 
CAG HAH JDV sing 245 n n 
CAH HAI JDV sing 246 n n 
CAH HAJ JDV sing 247 n n 
CAJ HAK JDV sing 248 n n 
CAJ HAL JDV sing 249 n n 
CAO HAO JDV sing 250 n n 
CAP HAP JDV sing 251 n n 
CAP HAQ JDV sing 252 n n 
CAT HAT JDV sing 253 n n 
CAW HAW JDV sing 254 n n 
CAW HAX JDV sing 255 n n 
CAX HAY JDV sing 256 n n 
CBA HBA JDV sing 257 n n 
CBB HBB JDV sing 258 n n 
CBG HBG JDV sing 259 n n 
CBI HBI JDV sing 260 n n 
CBJ HBJ JDV sing 261 n n 
CBL HBL JDV sing 262 n n 
CBM HBM JDV sing 263 n n 
CBN HBO JDV sing 264 n n 
CBN HBN JDV sing 265 n n 
CBO HBQ JDV sing 266 n n 
CBO HBP JDV sing 267 n n 
CBQ HBR JDV sing 268 n n 
CBQ HBS JDV sing 269 n n 
CBR HBT JDV sing 270 n n 
CBS HBV JDV sing 271 n n 
CBS HBW JDV sing 272 n n 
CBS HBU JDV sing 273 n n 
CBT HBZ JDV sing 274 n n 
CBT HBX JDV sing 275 n n 
CBT HBY JDV sing 276 n n 
NAN HAN JDV sing 277 n n 
NBF HBF JDV sing 278 n n 
OBP HB0 JDV sing 279 n n 
#
_atom_sites.entry_id                     6OGQ 
_atom_sites.fract_transf_matrix[1][1]    0.015918 
_atom_sites.fract_transf_matrix[1][2]    0.00919 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01838 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012172 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 101 101 GOL GOL . 
C 3 PEG A 1 102 201 PEG PEG . 
D 4 JDV A 1 103 101 JDV DRG . 
E 5 SO4 A 1 104 1 SO4 SO4 . 
F 6 HOH A 1 201 38 HOH HOH . 
F 6 HOH A 2 202 2 HOH HOH . 
F 6 HOH A 3 203 31 HOH HOH . 
F 6 HOH A 4 204 41 HOH HOH . 
F 6 HOH A 5 205 8 HOH HOH . 
F 6 HOH A 6 206 45 HOH HOH . 
F 6 HOH A 7 207 14 HOH HOH . 
F 6 HOH A 8 208 44 HOH HOH . 
F 6 HOH A 9 209 5 HOH HOH . 
F 6 HOH A 10 210 27 HOH HOH . 
F 6 HOH A 11 211 37 HOH HOH . 
F 6 HOH A 12 212 17 HOH HOH . 
F 6 HOH A 13 213 10 HOH HOH . 
F 6 HOH A 14 214 6 HOH HOH . 
F 6 HOH A 15 215 18 HOH HOH . 
F 6 HOH A 16 216 25 HOH HOH . 
F 6 HOH A 17 217 4 HOH HOH . 
F 6 HOH A 18 218 1 HOH HOH . 
F 6 HOH A 19 219 3 HOH HOH . 
F 6 HOH A 20 220 26 HOH HOH . 
F 6 HOH A 21 221 30 HOH HOH . 
F 6 HOH A 22 222 36 HOH HOH . 
F 6 HOH A 23 223 19 HOH HOH . 
F 6 HOH A 24 224 33 HOH HOH . 
F 6 HOH A 25 225 12 HOH HOH . 
F 6 HOH A 26 226 24 HOH HOH . 
F 6 HOH A 27 227 13 HOH HOH . 
F 6 HOH A 28 228 15 HOH HOH . 
F 6 HOH A 29 229 29 HOH HOH . 
F 6 HOH A 30 230 28 HOH HOH . 
F 6 HOH A 31 231 43 HOH HOH . 
F 6 HOH A 32 232 35 HOH HOH . 
F 6 HOH A 33 233 20 HOH HOH . 
F 6 HOH A 34 234 22 HOH HOH . 
F 6 HOH A 35 235 23 HOH HOH . 
F 6 HOH A 36 236 39 HOH HOH . 
F 6 HOH A 37 237 9 HOH HOH . 
F 6 HOH A 38 238 42 HOH HOH . 
F 6 HOH A 39 239 34 HOH HOH . 
F 6 HOH A 40 240 11 HOH HOH . 
F 6 HOH A 41 241 32 HOH HOH . 
F 6 HOH A 42 242 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA JDV . . . D 4 -11.943 -15.131 6.132 0.5 11.46 ? CAA JDV 103 A 1 
HETATM 2 C CAC JDV . . . D 4 -12.934 -14.618 8.194 0.5 12.07 ? CAC JDV 103 A 1 
HETATM 3 C CAD JDV . . . D 4 -11.671 -13.784 8.094 0.5 11.95 ? CAD JDV 103 A 1 
HETATM 4 C CAE JDV . . . D 4 -11.358 -13.785 6.625 0.5 11.76 ? CAE JDV 103 A 1 
HETATM 5 C CAF JDV . . . D 4 -10.406 -14.431 8.755 0.5 10.99 ? CAF JDV 103 A 1 
HETATM 6 C CAG JDV . . . D 4 -9.576 -14.939 7.57 0.5 11.82 ? CAG JDV 103 A 1 
HETATM 7 C CAH JDV . . . D 4 -9.87 -13.895 6.524 0.5 11.42 ? CAH JDV 103 A 1 
HETATM 8 C CAJ JDV . . . D 4 -10.046 -16.304 7.132 0.5 11.04 ? CAJ JDV 103 A 1 
HETATM 9 C CAL JDV . . . D 4 -10.464 -15.399 10.954 0.5 11.15 ? CAL JDV 103 A 1 
HETATM 10 C CAO JDV . . . D 4 -10.996 -16.309 13.247 0.5 11.51 ? CAO JDV 103 A 1 
HETATM 11 C CAP JDV . . . D 4 -10.151 -17.721 15.163 0.5 10.56 ? CAP JDV 103 A 1 
HETATM 12 C CAS JDV . . . D 4 -8.956 -16.095 17.937 0.5 11.51 ? CAS JDV 103 A 1 
HETATM 13 C CAT JDV . . . D 4 -10.566 -17.68 13.694 0.5 10.98 ? CAT JDV 103 A 1 
HETATM 14 C CAW JDV . . . D 4 -12.384 -15.863 13.829 0.5 12.13 ? CAW JDV 103 A 1 
HETATM 15 C CAX JDV . . . D 4 -7.715 -16.195 18.604 0.5 11.52 ? CAX JDV 103 A 1 
HETATM 16 C CAY JDV . . . D 4 -7.654 -16.647 19.857 0.5 13.17 ? CAY JDV 103 A 1 
HETATM 17 C CAZ JDV . . . D 4 -8.762 -17.022 20.532 0.5 12.08 ? CAZ JDV 103 A 1 
HETATM 18 C CBA JDV . . . D 4 -9.948 -16.944 19.922 0.5 11.78 ? CBA JDV 103 A 1 
HETATM 19 C CBB JDV . . . D 4 -10.096 -16.483 18.623 0.5 11.5 ? CBB JDV 103 A 1 
HETATM 20 C CBD JDV . . . D 4 -7.25 -17.437 22.188 0.5 13.79 ? CBD JDV 103 A 1 
HETATM 21 C CBG JDV . . . D 4 -5.395 -17.91 23.858 0.5 14.41 ? CBG JDV 103 A 1 
HETATM 22 C CBH JDV . . . D 4 -12.644 -14.608 13.182 0.5 12.79 ? CBH JDV 103 A 1 
HETATM 23 C CBI JDV . . . D 4 -11.926 -13.489 13.545 0.5 13.65 ? CBI JDV 103 A 1 
HETATM 24 C CBJ JDV . . . D 4 -12.107 -12.266 12.873 0.5 14.3 ? CBJ JDV 103 A 1 
HETATM 25 C CBK JDV . . . D 4 -13.031 -12.141 11.853 0.5 14.92 ? CBK JDV 103 A 1 
HETATM 26 C CBL JDV . . . D 4 -13.756 -13.278 11.493 0.5 14.59 ? CBL JDV 103 A 1 
HETATM 27 C CBM JDV . . . D 4 -13.572 -14.511 12.145 0.5 13.69 ? CBM JDV 103 A 1 
HETATM 28 C CBN JDV . . . D 4 -4.387 -18.5 23.007 0.5 15.06 ? CBN JDV 103 A 1 
HETATM 29 C CBO JDV . . . D 4 -4.811 -19.316 24.111 0.5 14.98 ? CBO JDV 103 A 1 
HETATM 30 C CBQ JDV . . . D 4 -7.717 -17.696 15.525 0.5 11.86 ? CBQ JDV 103 A 1 
HETATM 31 C CBR JDV . . . D 4 -7.161 -18.268 14.236 0.5 12.4 ? CBR JDV 103 A 1 
HETATM 32 C CBS JDV . . . D 4 -6.824 -17.186 13.184 0.5 13.06 ? CBS JDV 103 A 1 
HETATM 33 C CBT JDV . . . D 4 -5.862 -19.017 14.521 0.5 12.36 ? CBT JDV 103 A 1 
HETATM 34 F FBU JDV . . . D 4 -13.167 -10.827 11.135 0.5 17.34 ? FBU JDV 103 A 1 
HETATM 35 N NAN JDV . . . D 4 -11.048 -16.3 11.761 0.5 10.69 ? NAN JDV 103 A 1 
HETATM 36 N NAQ JDV . . . D 4 -8.929 -16.884 15.272 0.5 10.66 ? NAQ JDV 103 A 1 
HETATM 37 N NBE JDV . . . D 4 -8.538 -17.472 21.8 0.5 13.12 ? NBE JDV 103 A 1 
HETATM 38 N NBF JDV . . . D 4 -6.836 -17.856 23.411 0.5 13.8 ? NBF JDV 103 A 1 
HETATM 39 O OAB JDV . . . D 4 -12.794 -15.644 7.191 0.5 11.71 ? OAB JDV 103 A 1 
HETATM 40 O OAI JDV . . . D 4 -10.936 -16.181 5.987 0.5 11.53 ? OAI JDV 103 A 1 
HETATM 41 O OAK JDV . . . D 4 -10.85 -15.466 9.634 0.5 11.28 ? OAK JDV 103 A 1 
HETATM 42 O OAM JDV . . . D 4 -9.638 -14.559 11.347 0.5 10.71 ? OAM JDV 103 A 1 
HETATM 43 O OAU JDV . . . D 4 -10.361 -14.935 16.059 0.5 11.57 ? OAU JDV 103 A 1 
HETATM 44 O OAV JDV . . . D 4 -7.868 -14.678 16.064 0.5 11.65 ? OAV JDV 103 A 1 
HETATM 45 O OBP JDV . . . D 4 -11.621 -18.645 13.499 0.5 10.24 ? OBP JDV 103 A 1 
HETATM 46 S SAR JDV . . . D 4 -9.029 -15.563 16.307 0.5 11.78 ? SAR JDV 103 A 1 
HETATM 47 S SBC JDV . . . D 4 -6.313 -16.844 20.945 0.5 14.78 ? SBC JDV 103 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           492 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           47 
#