data_6OGZ
#
_model_server_result.job_id            RNzq-gKpeyGXRsk_UVQvXQ 
_model_server_result.datetime_utc      '2025-03-05 22:28:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ogz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":1102}' 
#
_entry.id    6OGZ 
#
_exptl.entry_id    6OGZ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OGZ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OGZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tridecameric 
_pdbx_struct_assembly.oligomeric_count      13 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             O 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
hydrog WATSON-CRICK hydrog1 A N1 A 10 B A 591 1_555 B N3 U 14 C U 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N6 A 10 B A 591 1_555 B O4 U 14 C U 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A N3 U 11 B U 592 1_555 B N1 A 13 C A 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A O4 U 11 B U 592 1_555 B N6 A 13 C A 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N1 A 12 B A 593 1_555 B N3 U 12 C U 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N6 A 12 B A 593 1_555 B O4 U 12 C U 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N3 U 13 B U 594 1_555 B N1 A 11 C A 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A O4 U 13 B U 594 1_555 B N6 A 11 C A 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A N1 A 14 B A 595 1_555 B N3 U 10 C U 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N6 A 14 B A 595 1_555 B O4 U 10 C U 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N3 U 15 B U 596 1_555 B N1 A 9 C A 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O4 U 15 B U 596 1_555 B N6 A 9 C A 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N1 A 16 B A 597 1_555 B N3 U 8 C U 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N6 A 16 B A 597 1_555 B O4 U 8 C U 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N3 U 17 B U 598 1_555 B N1 A 7 C A 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A O4 U 17 B U 598 1_555 B N6 A 7 C A 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N1 A 18 B A 599 1_555 B N3 U 6 C U 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A N6 A 18 B A 599 1_555 B O4 U 6 C U 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 168 n n 
PG O2G GTP sing 169 n n 
PG O3G GTP sing 170 n n 
PG O3B GTP sing 171 n n 
O2G HOG2 GTP sing 172 n n 
O3G HOG3 GTP sing 173 n n 
O3B PB GTP sing 174 n n 
PB O1B GTP doub 175 n n 
PB O2B GTP sing 176 n n 
PB O3A GTP sing 177 n n 
O2B HOB2 GTP sing 178 n n 
O3A PA GTP sing 179 n n 
PA O1A GTP doub 180 n n 
PA O2A GTP sing 181 n n 
PA O5' GTP sing 182 n n 
O2A HOA2 GTP sing 183 n n 
O5' C5' GTP sing 184 n n 
C5' C4' GTP sing 185 n n 
C5' H5' GTP sing 186 n n 
C5' "H5''" GTP sing 187 n n 
C4' O4' GTP sing 188 n n 
C4' C3' GTP sing 189 n n 
C4' H4' GTP sing 190 n n 
O4' C1' GTP sing 191 n n 
C3' O3' GTP sing 192 n n 
C3' C2' GTP sing 193 n n 
C3' H3' GTP sing 194 n n 
O3' HO3' GTP sing 195 n n 
C2' O2' GTP sing 196 n n 
C2' C1' GTP sing 197 n n 
C2' H2' GTP sing 198 n n 
O2' HO2' GTP sing 199 n n 
C1' N9 GTP sing 200 n n 
C1' H1' GTP sing 201 n n 
N9 C8 GTP sing 202 n y 
N9 C4 GTP sing 203 n y 
C8 N7 GTP doub 204 n y 
C8 H8 GTP sing 205 n n 
N7 C5 GTP sing 206 n y 
C5 C6 GTP sing 207 n n 
C5 C4 GTP doub 208 n y 
C6 O6 GTP doub 209 n n 
C6 N1 GTP sing 210 n n 
N1 C2 GTP sing 211 n n 
N1 HN1 GTP sing 212 n n 
C2 N2 GTP sing 213 n n 
C2 N3 GTP doub 214 n n 
N2 HN21 GTP sing 215 n n 
N2 HN22 GTP sing 216 n n 
N3 C4 GTP sing 217 n n 
#
_atom_sites.entry_id                     6OGZ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
N 5 UTP A 1 1101 1101 UTP UTP . 
O 6 GTP A 1 1102 1101 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . O 6 187.509 158.77 242.721 1 76.65 ? PG GTP 1102 A 1 
HETATM 2 O O1G GTP . . . O 6 188.61 158.531 241.719 1 76.65 ? O1G GTP 1102 A 1 
HETATM 3 O O2G GTP . . . O 6 188.067 158.627 244.116 1 76.65 ? O2G GTP 1102 A 1 
HETATM 4 O O3G GTP . . . O 6 186.964 160.164 242.54 1 76.65 ? O3G GTP 1102 A 1 
HETATM 5 O O3B GTP . . . O 6 186.339 157.685 242.499 1 76.65 ? O3B GTP 1102 A 1 
HETATM 6 P PB GTP . . . O 6 185.569 157.519 241.091 1 76.65 ? PB GTP 1102 A 1 
HETATM 7 O O1B GTP . . . O 6 184.983 158.846 240.676 1 76.65 ? O1B GTP 1102 A 1 
HETATM 8 O O2B GTP . . . O 6 184.48 156.477 241.189 1 76.65 ? O2B GTP 1102 A 1 
HETATM 9 O O3A GTP . . . O 6 186.697 157.083 240.021 1 76.65 ? O3A GTP 1102 A 1 
HETATM 10 P PA GTP . . . O 6 187.623 155.773 240.187 1 76.65 ? PA GTP 1102 A 1 
HETATM 11 O O1A GTP . . . O 6 188.724 155.817 239.155 1 76.65 ? O1A GTP 1102 A 1 
HETATM 12 O O2A GTP . . . O 6 188.211 155.665 241.572 1 76.65 ? O2A GTP 1102 A 1 
HETATM 13 O O5' GTP . . . O 6 186.643 154.542 239.846 1 76.65 ? O5' GTP 1102 A 1 
HETATM 14 C C5' GTP . . . O 6 186.799 153.805 238.653 1 76.65 ? C5' GTP 1102 A 1 
HETATM 15 C C4' GTP . . . O 6 185.874 154.306 237.548 1 76.65 ? C4' GTP 1102 A 1 
HETATM 16 O O4' GTP . . . O 6 186.068 155.69 237.338 1 76.65 ? O4' GTP 1102 A 1 
HETATM 17 C C3' GTP . . . O 6 186.168 153.609 236.231 1 76.65 ? C3' GTP 1102 A 1 
HETATM 18 O O3' GTP . . . O 6 185.176 152.653 235.947 1 76.65 ? O3' GTP 1102 A 1 
HETATM 19 C C2' GTP . . . O 6 186.138 154.696 235.183 1 76.65 ? C2' GTP 1102 A 1 
HETATM 20 O O2' GTP . . . O 6 184.92 154.637 234.481 1 76.65 ? O2' GTP 1102 A 1 
HETATM 21 C C1' GTP . . . O 6 186.197 155.995 235.961 1 76.65 ? C1' GTP 1102 A 1 
HETATM 22 N N9 GTP . . . O 6 187.483 156.689 235.762 1 76.65 ? N9 GTP 1102 A 1 
HETATM 23 C C8 GTP . . . O 6 188.391 156.508 234.751 1 76.65 ? C8 GTP 1102 A 1 
HETATM 24 N N7 GTP . . . O 6 189.425 157.356 234.954 1 76.65 ? N7 GTP 1102 A 1 
HETATM 25 C C5 GTP . . . O 6 189.185 158.08 236.072 1 76.65 ? C5 GTP 1102 A 1 
HETATM 26 C C6 GTP . . . O 6 189.896 159.077 236.728 1 76.65 ? C6 GTP 1102 A 1 
HETATM 27 O O6 GTP . . . O 6 190.977 159.46 236.298 1 76.65 ? O6 GTP 1102 A 1 
HETATM 28 N N1 GTP . . . O 6 189.39 159.645 237.873 1 76.65 ? N1 GTP 1102 A 1 
HETATM 29 C C2 GTP . . . O 6 188.176 159.222 238.361 1 76.65 ? C2 GTP 1102 A 1 
HETATM 30 N N2 GTP . . . O 6 187.681 159.765 239.466 1 76.65 ? N2 GTP 1102 A 1 
HETATM 31 N N3 GTP . . . O 6 187.47 158.233 237.712 1 76.65 ? N3 GTP 1102 A 1 
HETATM 32 C C4 GTP . . . O 6 187.967 157.671 236.585 1 76.65 ? C4 GTP 1102 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           32 
#