data_6OHR # _model_server_result.job_id tLm2JE5bWVKIbtK9Rq4DLA _model_server_result.datetime_utc '2024-12-14 00:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ohr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1101}' # _entry.id 6OHR # _exptl.entry_id 6OHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.486 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-fluoro-N-{(2S)-1-[(5R)-5-(3-fluorophenyl)-2-oxo-1-oxa-3,9-diazaspiro[5.5]undecan-9-yl]propan-2-yl}benzamide _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OHR _cell.length_a 93.039 _cell.length_b 155.106 _cell.length_c 273.56 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G 1 1 B,H 2 1 C,I 3 1 D,J 4 1 E,K 5 1 F,L 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C24 H27 F2 N3 O3' _chem_comp.formula_weight 443.486 _chem_comp.id MKG _chem_comp.mon_nstd_flag . _chem_comp.name 4-fluoro-N-{(2S)-1-[(5R)-5-(3-fluorophenyl)-2-oxo-1-oxa-3,9-diazaspiro[5.5]undecan-9-yl]propan-2-yl}benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 MKG doub 235 n y C11 C12 MKG sing 236 n y F1 C12 MKG sing 237 n n C10 C9 MKG sing 238 n y C12 C13 MKG doub 239 n y C7 C6 MKG sing 240 n n C9 C8 MKG sing 241 n n C9 C14 MKG doub 242 n y C13 C14 MKG sing 243 n y N2 C6 MKG sing 244 n n N2 C8 MKG sing 245 n n C6 C5 MKG sing 246 n n C8 O3 MKG doub 247 n n C5 N1 MKG sing 248 n n N1 C15 MKG sing 249 n n N1 C4 MKG sing 250 n n C15 C16 MKG sing 251 n n C16 C2 MKG sing 252 n n C4 C3 MKG sing 253 n n C3 C2 MKG sing 254 n n C2 O2 MKG sing 255 n n C2 C17 MKG sing 256 n n C20 C19 MKG doub 257 n y C20 C21 MKG sing 258 n y C19 C18 MKG sing 259 n y O2 C1 MKG sing 260 n n C21 C22 MKG doub 261 n y C18 C17 MKG sing 262 n n C18 C23 MKG doub 263 n y C17 C24 MKG sing 264 n n C22 C23 MKG sing 265 n y C22 F2 MKG sing 266 n n C1 O1 MKG doub 267 n n C1 N3 MKG sing 268 n n C24 N3 MKG sing 269 n n C3 H2 MKG sing 270 n n C3 H3 MKG sing 271 n n C5 H4 MKG sing 272 n n C5 H5 MKG sing 273 n n C6 H6 MKG sing 274 n n C10 H7 MKG sing 275 n n C11 H8 MKG sing 276 n n C13 H9 MKG sing 277 n n C14 H10 MKG sing 278 n n C15 H11 MKG sing 279 n n C15 H12 MKG sing 280 n n C16 H13 MKG sing 281 n n C16 H14 MKG sing 282 n n C17 H15 MKG sing 283 n n C19 H16 MKG sing 284 n n C20 H17 MKG sing 285 n n C21 H18 MKG sing 286 n n C23 H19 MKG sing 287 n n C24 H20 MKG sing 288 n n C24 H21 MKG sing 289 n n C4 H22 MKG sing 290 n n C4 H23 MKG sing 291 n n C7 H24 MKG sing 292 n n C7 H25 MKG sing 293 n n C7 H26 MKG sing 294 n n N2 H27 MKG sing 295 n n N3 H28 MKG sing 296 n n # _atom_sites.entry_id 6OHR _atom_sites.fract_transf_matrix[1][1] 0.010748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006447 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MKG A 1 1101 1101 MKG 104 . H 2 MKG B 1 1101 1101 MKG 104 . I 2 MKG C 1 1101 1101 MKG 104 . J 2 MKG D 1 1101 1101 MKG 104 . K 2 MKG E 1 1101 1101 MKG 104 . L 2 MKG F 1 1101 1101 MKG 104 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 MKG . . . G 2 14.008 1.864 52.976 1 41.87 ? N1 MKG 1101 A 1 HETATM 2 C C2 MKG . . . G 2 12.76 2.631 55.521 1 37.49 ? C2 MKG 1101 A 1 HETATM 3 C C3 MKG . . . G 2 13.571 1.344 55.353 1 37.18 ? C3 MKG 1101 A 1 HETATM 4 C C5 MKG . . . G 2 15.011 1.955 51.91 1 40.77 ? C5 MKG 1101 A 1 HETATM 5 C C6 MKG . . . G 2 15.845 0.691 51.666 1 36.82 ? C6 MKG 1101 A 1 HETATM 6 C C8 MKG . . . G 2 15.23 -1.675 51.826 1 46.34 ? C8 MKG 1101 A 1 HETATM 7 C C9 MKG . . . G 2 14.463 -2.796 51.184 1 51.29 ? C9 MKG 1101 A 1 HETATM 8 C C1 MKG . . . G 2 14.109 3.787 57.221 1 44.02 ? C1 MKG 1101 A 1 HETATM 9 C C10 MKG . . . G 2 14.147 -2.744 49.831 1 56.04 ? C10 MKG 1101 A 1 HETATM 10 C C11 MKG . . . G 2 13.436 -3.767 49.23 1 56.22 ? C11 MKG 1101 A 1 HETATM 11 C C12 MKG . . . G 2 13.041 -4.823 50.004 1 57.01 ? C12 MKG 1101 A 1 HETATM 12 C C13 MKG . . . G 2 13.316 -4.912 51.341 1 49.12 ? C13 MKG 1101 A 1 HETATM 13 C C14 MKG . . . G 2 14.03 -3.885 51.933 1 46.89 ? C14 MKG 1101 A 1 HETATM 14 C C15 MKG . . . G 2 13.329 3.153 53.127 1 43.09 ? C15 MKG 1101 A 1 HETATM 15 C C16 MKG . . . G 2 12.218 3.063 54.158 1 39.5 ? C16 MKG 1101 A 1 HETATM 16 C C17 MKG . . . G 2 11.653 2.524 56.572 1 37.03 ? C17 MKG 1101 A 1 HETATM 17 C C18 MKG . . . G 2 10.692 3.7 56.489 1 42.97 ? C18 MKG 1101 A 1 HETATM 18 C C19 MKG . . . G 2 9.432 3.543 55.931 1 51.05 ? C19 MKG 1101 A 1 HETATM 19 C C20 MKG . . . G 2 8.558 4.613 55.835 1 41.88 ? C20 MKG 1101 A 1 HETATM 20 C C21 MKG . . . G 2 8.926 5.858 56.286 1 44.35 ? C21 MKG 1101 A 1 HETATM 21 C C22 MKG . . . G 2 10.174 5.995 56.822 1 49.82 ? C22 MKG 1101 A 1 HETATM 22 C C23 MKG . . . G 2 11.064 4.962 56.932 1 40.87 ? C23 MKG 1101 A 1 HETATM 23 C C24 MKG . . . G 2 12.24 2.314 57.986 1 34.3 ? C24 MKG 1101 A 1 HETATM 24 C C4 MKG . . . G 2 14.616 1.474 54.255 1 39.7 ? C4 MKG 1101 A 1 HETATM 25 C C7 MKG . . . G 2 16.774 0.889 50.488 1 44.8 ? C7 MKG 1101 A 1 HETATM 26 F F1 MKG . . . G 2 12.337 -5.83 49.417 1 67.78 ? F1 MKG 1101 A 1 HETATM 27 F F2 MKG . . . G 2 10.552 7.221 57.27 1 71.51 ? F2 MKG 1101 A 1 HETATM 28 N N2 MKG . . . G 2 14.963 -0.444 51.396 1 38.53 ? N2 MKG 1101 A 1 HETATM 29 N N3 MKG . . . G 2 13.406 3.167 58.186 1 38.35 ? N3 MKG 1101 A 1 HETATM 30 O O1 MKG . . . G 2 15.08 4.465 57.479 1 42.22 ? O1 MKG 1101 A 1 HETATM 31 O O2 MKG . . . G 2 13.72 3.68 55.937 1 46.29 ? O2 MKG 1101 A 1 HETATM 32 O O3 MKG . . . G 2 16.111 -1.905 52.653 1 46.19 ? O3 MKG 1101 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #