data_6OHT # _model_server_result.job_id X6mYec2uYhBixkcMPNbxcQ _model_server_result.datetime_utc '2024-11-26 06:49:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6OHT # _exptl.entry_id 6OHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 387.599 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3beta-(2-Diethylaminoethoxy)androst-5-en-17-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OHT _cell.length_a 194.566 _cell.length_b 67.823 _cell.length_c 96.858 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E 1 1 C,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -67.823 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CYS 128 A CYS 120 1_555 A N MSE 129 A MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 129 A MSE 121 1_555 A N GLU 130 A GLU 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 A C PHE 199 A PHE 191 1_555 A N MSE 200 A MSE 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 200 A MSE 192 1_555 A N ASN 201 A ASN 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 B C CYS 128 B CYS 120 1_555 B N MSE 129 B MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C MSE 129 B MSE 121 1_555 B N GLU 130 B GLU 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 B C PHE 199 B PHE 191 1_555 B N MSE 200 B MSE 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 B C MSE 200 B MSE 192 1_555 B N ASN 201 B ASN 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale9 C C CYS 128 C CYS 120 1_555 C N MSE 129 C MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 C C MSE 129 C MSE 121 1_555 C N GLU 130 C GLU 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 C C PHE 199 C PHE 191 1_555 C N MSE 200 C MSE 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 C C MSE 200 C MSE 192 1_555 C N ASN 201 C ASN 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C25 H41 N O2' _chem_comp.formula_weight 387.599 _chem_comp.id MKM _chem_comp.mon_nstd_flag . _chem_comp.name 3beta-(2-Diethylaminoethoxy)androst-5-en-17-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 MKM sing 216 n n C8 C9 MKM sing 217 n n C7 C4 MKM doub 218 n n C15 C16 MKM sing 219 n n C15 C11 MKM sing 220 n n C16 C17 MKM sing 221 n n C23 C22 MKM sing 222 n n C22 N MKM sing 223 n n C11 C9 MKM sing 224 n n C11 C12 MKM sing 225 n n C9 C10 MKM sing 226 n n C4 C3 MKM sing 227 n n C4 C5 MKM sing 228 n n N C21 MKM sing 229 n n N C24 MKM sing 230 n n C21 C20 MKM sing 231 n n C3 C2 MKM sing 232 n n C17 C12 MKM sing 233 n n C17 O2 MKM doub 234 n n C20 O1 MKM sing 235 n n C10 C5 MKM sing 236 n n C10 C14 MKM sing 237 n n C12 C19 MKM sing 238 n n C12 C13 MKM sing 239 n n C25 C24 MKM sing 240 n n C5 C18 MKM sing 241 n n C5 C6 MKM sing 242 n n C2 O1 MKM sing 243 n n C2 C1 MKM sing 244 n n C13 C14 MKM sing 245 n n C6 C1 MKM sing 246 n n C1 H2 MKM sing 247 n n C1 H3 MKM sing 248 n n C10 H4 MKM sing 249 n n C11 H5 MKM sing 250 n n C13 H6 MKM sing 251 n n C13 H7 MKM sing 252 n n C14 H8 MKM sing 253 n n C14 H9 MKM sing 254 n n C15 H10 MKM sing 255 n n C15 H11 MKM sing 256 n n C16 H12 MKM sing 257 n n C16 H13 MKM sing 258 n n C18 H14 MKM sing 259 n n C18 H15 MKM sing 260 n n C18 H16 MKM sing 261 n n C19 H17 MKM sing 262 n n C19 H18 MKM sing 263 n n C19 H19 MKM sing 264 n n C2 H20 MKM sing 265 n n C20 H21 MKM sing 266 n n C20 H22 MKM sing 267 n n C21 H23 MKM sing 268 n n C21 H24 MKM sing 269 n n C22 H25 MKM sing 270 n n C22 H26 MKM sing 271 n n C23 H27 MKM sing 272 n n C23 H28 MKM sing 273 n n C23 H29 MKM sing 274 n n C24 H30 MKM sing 275 n n C24 H31 MKM sing 276 n n C25 H32 MKM sing 277 n n C25 H33 MKM sing 278 n n C25 H34 MKM sing 279 n n C3 H35 MKM sing 280 n n C3 H36 MKM sing 281 n n C6 H38 MKM sing 282 n n C6 H39 MKM sing 283 n n C7 H40 MKM sing 284 n n C8 H42 MKM sing 285 n n C8 H43 MKM sing 286 n n C9 H44 MKM sing 287 n n # _atom_sites.entry_id 6OHT _atom_sites.fract_transf_matrix[1][1] 0.00514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MKM A 1 301 1 MKM U1A . E 2 MKM B 1 301 2 MKM U1A . F 2 MKM C 1 301 3 MKM U1A . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N MKM . . . D 2 -20.681 8.947 24.386 1 45.56 ? N MKM 301 A 1 HETATM 2 C C1 MKM . . . D 2 -15.487 10.107 27.047 1 51.35 ? C1 MKM 301 A 1 HETATM 3 C C10 MKM . . . D 2 -11.963 10.75 25.279 1 56.17 ? C10 MKM 301 A 1 HETATM 4 C C11 MKM . . . D 2 -9.714 10.463 24.088 1 65 ? C11 MKM 301 A 1 HETATM 5 C C12 MKM . . . D 2 -8.969 10.819 25.408 1 72.22 ? C12 MKM 301 A 1 HETATM 6 C C13 MKM . . . D 2 -9.73 11.684 26.258 1 63.31 ? C13 MKM 301 A 1 HETATM 7 C C14 MKM . . . D 2 -11.21 11.045 26.559 1 61.59 ? C14 MKM 301 A 1 HETATM 8 C C15 MKM . . . D 2 -8.603 9.639 23.202 1 69.56 ? C15 MKM 301 A 1 HETATM 9 C C16 MKM . . . D 2 -7.299 10.494 23.302 1 72 ? C16 MKM 301 A 1 HETATM 10 C C17 MKM . . . D 2 -7.397 11.212 24.901 1 79.23 ? C17 MKM 301 A 1 HETATM 11 C C18 MKM . . . D 2 -12.99 8.527 26.094 1 42.97 ? C18 MKM 301 A 1 HETATM 12 C C19 MKM . . . D 2 -8.798 9.499 26.209 1 77.58 ? C19 MKM 301 A 1 HETATM 13 C C2 MKM . . . D 2 -16.286 10.049 25.835 1 39.5 ? C2 MKM 301 A 1 HETATM 14 C C20 MKM . . . D 2 -18.274 8.985 24.971 1 41.11 ? C20 MKM 301 A 1 HETATM 15 C C21 MKM . . . D 2 -19.55 9.851 24.739 1 39.84 ? C21 MKM 301 A 1 HETATM 16 C C22 MKM . . . D 2 -21.782 9.742 23.795 1 57.82 ? C22 MKM 301 A 1 HETATM 17 C C23 MKM . . . D 2 -22.984 8.847 23.413 1 67.82 ? C23 MKM 301 A 1 HETATM 18 C C24 MKM . . . D 2 -21.126 8.249 25.616 1 44.85 ? C24 MKM 301 A 1 HETATM 19 C C25 MKM . . . D 2 -20.943 6.723 25.473 1 42.42 ? C25 MKM 301 A 1 HETATM 20 C C3 MKM . . . D 2 -15.592 9.209 24.741 1 42.5 ? C3 MKM 301 A 1 HETATM 21 C C4 MKM . . . D 2 -14.207 9.831 24.356 1 53.22 ? C4 MKM 301 A 1 HETATM 22 C C5 MKM . . . D 2 -13.371 9.958 25.62 1 51.14 ? C5 MKM 301 A 1 HETATM 23 C C6 MKM . . . D 2 -14.099 10.663 26.782 1 51.08 ? C6 MKM 301 A 1 HETATM 24 C C7 MKM . . . D 2 -13.42 9.463 22.916 1 57.59 ? C7 MKM 301 A 1 HETATM 25 C C8 MKM . . . D 2 -11.917 9.779 22.813 1 55.91 ? C8 MKM 301 A 1 HETATM 26 C C9 MKM . . . D 2 -11.134 9.921 24.288 1 57.73 ? C9 MKM 301 A 1 HETATM 27 O O1 MKM . . . D 2 -17.582 9.455 26.137 1 42.17 ? O1 MKM 301 A 1 HETATM 28 O O2 MKM . . . D 2 -6.558 11.822 25.483 1 89.21 ? O2 MKM 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 364 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #