data_6OI4 # _model_server_result.job_id xUMtX8dumX_QTZJWsvpuHQ _model_server_result.datetime_utc '2025-09-03 23:29:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oi4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":105}' # _entry.id 6OI4 # _exptl.entry_id 6OI4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6OI4 _cell.length_a 99.373 _cell.length_b 99.373 _cell.length_c 41.705 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OI4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,P,Q,R 1 1 D,E,F,M,N,O,S,T,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C GLU 11 E GLU 949 1_555 C N PTR 12 E PTR 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 C C PTR 12 E PTR 950 1_555 C N ILE 13 E ILE 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 F C GLU 11 F GLU 949 1_555 F N PTR 12 F PTR 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6OI4 _atom_sites.fract_transf_matrix[1][1] 0.010063 _atom_sites.fract_transf_matrix[1][2] 0.00581 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 EDO A 1 201 5 EDO EDO . H 4 EDO C 1 101 2 EDO EDO . I 4 EDO C 1 102 4 EDO EDO . J 4 EDO C 1 103 7 EDO EDO . K 4 EDO C 1 104 8 EDO EDO . L 4 EDO C 1 105 10 EDO EDO . M 4 EDO D 1 101 1 EDO EDO . N 4 EDO D 1 102 9 EDO EDO . O 4 EDO F 1 1001 11 EDO EDO . P 5 HOH A 1 301 285 HOH HOH . P 5 HOH A 2 302 24 HOH HOH . P 5 HOH A 3 303 214 HOH HOH . P 5 HOH A 4 304 63 HOH HOH . P 5 HOH A 5 305 42 HOH HOH . P 5 HOH A 6 306 245 HOH HOH . P 5 HOH A 7 307 89 HOH HOH . P 5 HOH A 8 308 157 HOH HOH . P 5 HOH A 9 309 60 HOH HOH . P 5 HOH A 10 310 184 HOH HOH . P 5 HOH A 11 311 19 HOH HOH . P 5 HOH A 12 312 254 HOH HOH . P 5 HOH A 13 313 90 HOH HOH . P 5 HOH A 14 314 43 HOH HOH . P 5 HOH A 15 315 75 HOH HOH . P 5 HOH A 16 316 168 HOH HOH . P 5 HOH A 17 317 76 HOH HOH . P 5 HOH A 18 318 249 HOH HOH . P 5 HOH A 19 319 100 HOH HOH . P 5 HOH A 20 320 12 HOH HOH . P 5 HOH A 21 321 199 HOH HOH . P 5 HOH A 22 322 201 HOH HOH . P 5 HOH A 23 323 97 HOH HOH . P 5 HOH A 24 324 2 HOH HOH . P 5 HOH A 25 325 220 HOH HOH . P 5 HOH A 26 326 256 HOH HOH . P 5 HOH A 27 327 95 HOH HOH . P 5 HOH A 28 328 185 HOH HOH . P 5 HOH A 29 329 20 HOH HOH . P 5 HOH A 30 330 8 HOH HOH . P 5 HOH A 31 331 33 HOH HOH . P 5 HOH A 32 332 37 HOH HOH . P 5 HOH A 33 333 45 HOH HOH . P 5 HOH A 34 334 114 HOH HOH . P 5 HOH A 35 335 150 HOH HOH . P 5 HOH A 36 336 287 HOH HOH . P 5 HOH A 37 337 11 HOH HOH . P 5 HOH A 38 338 147 HOH HOH . P 5 HOH A 39 339 14 HOH HOH . P 5 HOH A 40 340 56 HOH HOH . P 5 HOH A 41 341 148 HOH HOH . P 5 HOH A 42 342 29 HOH HOH . P 5 HOH A 43 343 65 HOH HOH . P 5 HOH A 44 344 101 HOH HOH . P 5 HOH A 45 345 132 HOH HOH . P 5 HOH A 46 346 162 HOH HOH . P 5 HOH A 47 347 85 HOH HOH . P 5 HOH A 48 348 133 HOH HOH . P 5 HOH A 49 349 74 HOH HOH . P 5 HOH A 50 350 149 HOH HOH . P 5 HOH A 51 351 255 HOH HOH . P 5 HOH A 52 352 96 HOH HOH . P 5 HOH A 53 353 280 HOH HOH . P 5 HOH A 54 354 248 HOH HOH . P 5 HOH A 55 355 275 HOH HOH . P 5 HOH A 56 356 182 HOH HOH . P 5 HOH A 57 357 215 HOH HOH . P 5 HOH A 58 358 246 HOH HOH . P 5 HOH A 59 359 222 HOH HOH . P 5 HOH A 60 360 274 HOH HOH . P 5 HOH A 61 361 103 HOH HOH . Q 5 HOH C 1 201 234 HOH HOH . Q 5 HOH C 2 202 156 HOH HOH . Q 5 HOH C 3 203 233 HOH HOH . Q 5 HOH C 4 204 179 HOH HOH . Q 5 HOH C 5 205 30 HOH HOH . Q 5 HOH C 6 206 217 HOH HOH . Q 5 HOH C 7 207 194 HOH HOH . Q 5 HOH C 8 208 98 HOH HOH . Q 5 HOH C 9 209 190 HOH HOH . Q 5 HOH C 10 210 169 HOH HOH . Q 5 HOH C 11 211 25 HOH HOH . Q 5 HOH C 12 212 144 HOH HOH . Q 5 HOH C 13 213 295 HOH HOH . Q 5 HOH C 14 214 109 HOH HOH . Q 5 HOH C 15 215 207 HOH HOH . Q 5 HOH C 16 216 51 HOH HOH . Q 5 HOH C 17 217 188 HOH HOH . Q 5 HOH C 18 218 91 HOH HOH . Q 5 HOH C 19 219 50 HOH HOH . Q 5 HOH C 20 220 278 HOH HOH . Q 5 HOH C 21 221 99 HOH HOH . Q 5 HOH C 22 222 28 HOH HOH . Q 5 HOH C 23 223 202 HOH HOH . Q 5 HOH C 24 224 212 HOH HOH . Q 5 HOH C 25 225 193 HOH HOH . Q 5 HOH C 26 226 146 HOH HOH . Q 5 HOH C 27 227 196 HOH HOH . Q 5 HOH C 28 228 5 HOH HOH . Q 5 HOH C 29 229 209 HOH HOH . Q 5 HOH C 30 230 22 HOH HOH . Q 5 HOH C 31 231 206 HOH HOH . Q 5 HOH C 32 232 53 HOH HOH . Q 5 HOH C 33 233 284 HOH HOH . Q 5 HOH C 34 234 189 HOH HOH . Q 5 HOH C 35 235 272 HOH HOH . Q 5 HOH C 36 236 151 HOH HOH . Q 5 HOH C 37 237 66 HOH HOH . Q 5 HOH C 38 238 70 HOH HOH . Q 5 HOH C 39 239 273 HOH HOH . Q 5 HOH C 40 240 59 HOH HOH . Q 5 HOH C 41 241 10 HOH HOH . Q 5 HOH C 42 242 279 HOH HOH . Q 5 HOH C 43 243 139 HOH HOH . Q 5 HOH C 44 244 69 HOH HOH . Q 5 HOH C 45 245 140 HOH HOH . Q 5 HOH C 46 246 264 HOH HOH . Q 5 HOH C 47 247 236 HOH HOH . Q 5 HOH C 48 248 235 HOH HOH . Q 5 HOH C 49 249 94 HOH HOH . Q 5 HOH C 50 250 145 HOH HOH . Q 5 HOH C 51 251 268 HOH HOH . Q 5 HOH C 52 252 197 HOH HOH . Q 5 HOH C 53 253 276 HOH HOH . Q 5 HOH C 54 254 208 HOH HOH . Q 5 HOH C 55 255 205 HOH HOH . Q 5 HOH C 56 256 277 HOH HOH . R 5 HOH E 1 1001 227 HOH HOH . R 5 HOH E 2 1002 164 HOH HOH . R 5 HOH E 3 1003 299 HOH HOH . R 5 HOH E 4 1004 228 HOH HOH . R 5 HOH E 5 1005 300 HOH HOH . R 5 HOH E 6 1006 296 HOH HOH . S 5 HOH B 1 201 260 HOH HOH . S 5 HOH B 2 202 286 HOH HOH . S 5 HOH B 3 203 152 HOH HOH . S 5 HOH B 4 204 41 HOH HOH . S 5 HOH B 5 205 62 HOH HOH . S 5 HOH B 6 206 181 HOH HOH . S 5 HOH B 7 207 47 HOH HOH . S 5 HOH B 8 208 297 HOH HOH . S 5 HOH B 9 209 73 HOH HOH . S 5 HOH B 10 210 44 HOH HOH . S 5 HOH B 11 211 213 HOH HOH . S 5 HOH B 12 212 153 HOH HOH . S 5 HOH B 13 213 298 HOH HOH . S 5 HOH B 14 214 49 HOH HOH . S 5 HOH B 15 215 137 HOH HOH . S 5 HOH B 16 216 165 HOH HOH . S 5 HOH B 17 217 3 HOH HOH . S 5 HOH B 18 218 204 HOH HOH . S 5 HOH B 19 219 219 HOH HOH . S 5 HOH B 20 220 252 HOH HOH . S 5 HOH B 21 221 143 HOH HOH . S 5 HOH B 22 222 23 HOH HOH . S 5 HOH B 23 223 9 HOH HOH . S 5 HOH B 24 224 40 HOH HOH . S 5 HOH B 25 225 32 HOH HOH . S 5 HOH B 26 226 17 HOH HOH . S 5 HOH B 27 227 13 HOH HOH . S 5 HOH B 28 228 231 HOH HOH . S 5 HOH B 29 229 6 HOH HOH . S 5 HOH B 30 230 15 HOH HOH . S 5 HOH B 31 231 83 HOH HOH . S 5 HOH B 32 232 79 HOH HOH . S 5 HOH B 33 233 71 HOH HOH . S 5 HOH B 34 234 178 HOH HOH . S 5 HOH B 35 235 258 HOH HOH . S 5 HOH B 36 236 113 HOH HOH . S 5 HOH B 37 237 261 HOH HOH . S 5 HOH B 38 238 27 HOH HOH . S 5 HOH B 39 239 200 HOH HOH . S 5 HOH B 40 240 55 HOH HOH . S 5 HOH B 41 241 163 HOH HOH . S 5 HOH B 42 242 106 HOH HOH . S 5 HOH B 43 243 21 HOH HOH . S 5 HOH B 44 244 46 HOH HOH . S 5 HOH B 45 245 282 HOH HOH . S 5 HOH B 46 246 294 HOH HOH . S 5 HOH B 47 247 72 HOH HOH . S 5 HOH B 48 248 221 HOH HOH . S 5 HOH B 49 249 82 HOH HOH . S 5 HOH B 50 250 105 HOH HOH . S 5 HOH B 51 251 78 HOH HOH . S 5 HOH B 52 252 259 HOH HOH . S 5 HOH B 53 253 166 HOH HOH . S 5 HOH B 54 254 291 HOH HOH . S 5 HOH B 55 255 257 HOH HOH . S 5 HOH B 56 256 176 HOH HOH . S 5 HOH B 57 257 93 HOH HOH . S 5 HOH B 58 258 223 HOH HOH . S 5 HOH B 59 259 240 HOH HOH . S 5 HOH B 60 260 290 HOH HOH . S 5 HOH B 61 261 267 HOH HOH . S 5 HOH B 62 262 292 HOH HOH . S 5 HOH B 63 263 289 HOH HOH . T 5 HOH D 1 201 288 HOH HOH . T 5 HOH D 2 202 293 HOH HOH . T 5 HOH D 3 203 117 HOH HOH . T 5 HOH D 4 204 211 HOH HOH . T 5 HOH D 5 205 174 HOH HOH . T 5 HOH D 6 206 125 HOH HOH . T 5 HOH D 7 207 129 HOH HOH . T 5 HOH D 8 208 138 HOH HOH . T 5 HOH D 9 209 104 HOH HOH . T 5 HOH D 10 210 36 HOH HOH . T 5 HOH D 11 211 126 HOH HOH . T 5 HOH D 12 212 124 HOH HOH . T 5 HOH D 13 213 239 HOH HOH . T 5 HOH D 14 214 107 HOH HOH . T 5 HOH D 15 215 16 HOH HOH . T 5 HOH D 16 216 111 HOH HOH . T 5 HOH D 17 217 68 HOH HOH . T 5 HOH D 18 218 26 HOH HOH . T 5 HOH D 19 219 31 HOH HOH . T 5 HOH D 20 220 119 HOH HOH . T 5 HOH D 21 221 108 HOH HOH . T 5 HOH D 22 222 122 HOH HOH . T 5 HOH D 23 223 115 HOH HOH . T 5 HOH D 24 224 18 HOH HOH . T 5 HOH D 25 225 84 HOH HOH . T 5 HOH D 26 226 186 HOH HOH . T 5 HOH D 27 227 120 HOH HOH . T 5 HOH D 28 228 180 HOH HOH . T 5 HOH D 29 229 4 HOH HOH . T 5 HOH D 30 230 64 HOH HOH . T 5 HOH D 31 231 57 HOH HOH . T 5 HOH D 32 232 92 HOH HOH . T 5 HOH D 33 233 203 HOH HOH . T 5 HOH D 34 234 112 HOH HOH . T 5 HOH D 35 235 54 HOH HOH . T 5 HOH D 36 236 35 HOH HOH . T 5 HOH D 37 237 123 HOH HOH . T 5 HOH D 38 238 269 HOH HOH . T 5 HOH D 39 239 67 HOH HOH . T 5 HOH D 40 240 271 HOH HOH . T 5 HOH D 41 241 177 HOH HOH . T 5 HOH D 42 242 7 HOH HOH . T 5 HOH D 43 243 58 HOH HOH . T 5 HOH D 44 244 160 HOH HOH . T 5 HOH D 45 245 77 HOH HOH . T 5 HOH D 46 246 110 HOH HOH . T 5 HOH D 47 247 265 HOH HOH . T 5 HOH D 48 248 159 HOH HOH . T 5 HOH D 49 249 127 HOH HOH . T 5 HOH D 50 250 171 HOH HOH . T 5 HOH D 51 251 121 HOH HOH . T 5 HOH D 52 252 237 HOH HOH . T 5 HOH D 53 253 116 HOH HOH . T 5 HOH D 54 254 232 HOH HOH . T 5 HOH D 55 255 266 HOH HOH . T 5 HOH D 56 256 270 HOH HOH . T 5 HOH D 57 257 173 HOH HOH . U 5 HOH F 1 1101 263 HOH HOH . U 5 HOH F 2 1102 48 HOH HOH . U 5 HOH F 3 1103 134 HOH HOH . U 5 HOH F 4 1104 224 HOH HOH . U 5 HOH F 5 1105 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . L 4 -17.256 2.724 -3.991 1 44.4 ? C1 EDO 105 C 1 HETATM 2 O O1 EDO . . . L 4 -16.449 3.809 -4.479 1 47.61 ? O1 EDO 105 C 1 HETATM 3 C C2 EDO . . . L 4 -17.809 2.989 -2.588 1 44.29 ? C2 EDO 105 C 1 HETATM 4 O O2 EDO . . . L 4 -16.751 3.244 -1.635 1 30.6 ? O2 EDO 105 C 1 HETATM 5 H H11 EDO . . . L 4 -18.09 2.562 -4.678 1 53.29 ? H11 EDO 105 C 1 HETATM 6 H H12 EDO . . . L 4 -16.656 1.812 -3.972 1 53.29 ? H12 EDO 105 C 1 HETATM 7 H HO1 EDO . . . L 4 -16.114 3.59 -5.36 1 57.15 ? HO1 EDO 105 C 1 HETATM 8 H H21 EDO . . . L 4 -18.389 2.124 -2.259 1 53.17 ? H21 EDO 105 C 1 HETATM 9 H H22 EDO . . . L 4 -18.48 3.85 -2.621 1 53.17 ? H22 EDO 105 C 1 HETATM 10 H HO2 EDO . . . L 4 -17.135 3.402 -0.762 1 36.74 ? HO2 EDO 105 C 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #