data_6OIC # _model_server_result.job_id MOmLcevwhOrfqefGSlfSgg _model_server_result.datetime_utc '2024-11-05 16:34:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6OIC # _exptl.entry_id 6OIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OIC _cell.length_a 76.101 _cell.length_b 108.753 _cell.length_c 131.058 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 161 A CYS 201 1_555 G S H2S . A H2S 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? covale ? covale2 B SG CYS 161 B CYS 201 1_555 J S H2S . B H2S 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OIC _atom_sites.fract_transf_matrix[1][1] 0.01314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 UQ1 A 1 502 502 UQ1 UQ1 . E 3 UQ1 A 1 503 501 UQ1 UQ1 . F 3 UQ1 A 1 504 502 UQ1 UQ1 . G 4 H2S A 1 505 1 H2S H2S . H 2 FAD B 1 501 501 FAD FAD . I 3 UQ1 B 1 502 501 UQ1 UQ1 . J 4 H2S B 1 503 2 H2S H2S . K 5 HOH A 1 601 53 HOH HOH . K 5 HOH A 2 602 12 HOH HOH . K 5 HOH A 3 603 74 HOH HOH . K 5 HOH A 4 604 100 HOH HOH . K 5 HOH A 5 605 51 HOH HOH . K 5 HOH A 6 606 60 HOH HOH . K 5 HOH A 7 607 105 HOH HOH . K 5 HOH A 8 608 72 HOH HOH . K 5 HOH A 9 609 103 HOH HOH . K 5 HOH A 10 610 14 HOH HOH . K 5 HOH A 11 611 50 HOH HOH . K 5 HOH A 12 612 16 HOH HOH . K 5 HOH A 13 613 102 HOH HOH . K 5 HOH A 14 614 107 HOH HOH . K 5 HOH A 15 615 27 HOH HOH . K 5 HOH A 16 616 43 HOH HOH . K 5 HOH A 17 617 52 HOH HOH . K 5 HOH A 18 618 81 HOH HOH . K 5 HOH A 19 619 108 HOH HOH . K 5 HOH A 20 620 79 HOH HOH . K 5 HOH A 21 621 1 HOH HOH . K 5 HOH A 22 622 32 HOH HOH . K 5 HOH A 23 623 76 HOH HOH . K 5 HOH A 24 624 20 HOH HOH . K 5 HOH A 25 625 28 HOH HOH . K 5 HOH A 26 626 45 HOH HOH . K 5 HOH A 27 627 88 HOH HOH . K 5 HOH A 28 628 9 HOH HOH . K 5 HOH A 29 629 96 HOH HOH . K 5 HOH A 30 630 25 HOH HOH . K 5 HOH A 31 631 110 HOH HOH . K 5 HOH A 32 632 97 HOH HOH . K 5 HOH A 33 633 95 HOH HOH . K 5 HOH A 34 634 83 HOH HOH . K 5 HOH A 35 635 4 HOH HOH . K 5 HOH A 36 636 66 HOH HOH . K 5 HOH A 37 637 91 HOH HOH . K 5 HOH A 38 638 71 HOH HOH . K 5 HOH A 39 639 62 HOH HOH . K 5 HOH A 40 640 98 HOH HOH . K 5 HOH A 41 641 6 HOH HOH . K 5 HOH A 42 642 49 HOH HOH . K 5 HOH A 43 643 35 HOH HOH . K 5 HOH A 44 644 106 HOH HOH . K 5 HOH A 45 645 41 HOH HOH . K 5 HOH A 46 646 115 HOH HOH . K 5 HOH A 47 647 101 HOH HOH . K 5 HOH A 48 648 86 HOH HOH . K 5 HOH A 49 649 11 HOH HOH . K 5 HOH A 50 650 111 HOH HOH . K 5 HOH A 51 651 38 HOH HOH . K 5 HOH A 52 652 59 HOH HOH . K 5 HOH A 53 653 69 HOH HOH . K 5 HOH A 54 654 34 HOH HOH . K 5 HOH A 55 655 24 HOH HOH . K 5 HOH A 56 656 58 HOH HOH . K 5 HOH A 57 657 92 HOH HOH . L 5 HOH B 1 601 82 HOH HOH . L 5 HOH B 2 602 114 HOH HOH . L 5 HOH B 3 603 21 HOH HOH . L 5 HOH B 4 604 65 HOH HOH . L 5 HOH B 5 605 85 HOH HOH . L 5 HOH B 6 606 2 HOH HOH . L 5 HOH B 7 607 23 HOH HOH . L 5 HOH B 8 608 30 HOH HOH . L 5 HOH B 9 609 13 HOH HOH . L 5 HOH B 10 610 70 HOH HOH . L 5 HOH B 11 611 19 HOH HOH . L 5 HOH B 12 612 55 HOH HOH . L 5 HOH B 13 613 48 HOH HOH . L 5 HOH B 14 614 39 HOH HOH . L 5 HOH B 15 615 42 HOH HOH . L 5 HOH B 16 616 18 HOH HOH . L 5 HOH B 17 617 57 HOH HOH . L 5 HOH B 18 618 56 HOH HOH . L 5 HOH B 19 619 8 HOH HOH . L 5 HOH B 20 620 15 HOH HOH . L 5 HOH B 21 621 112 HOH HOH . L 5 HOH B 22 622 75 HOH HOH . L 5 HOH B 23 623 22 HOH HOH . L 5 HOH B 24 624 61 HOH HOH . L 5 HOH B 25 625 5 HOH HOH . L 5 HOH B 26 626 80 HOH HOH . L 5 HOH B 27 627 40 HOH HOH . L 5 HOH B 28 628 7 HOH HOH . L 5 HOH B 29 629 17 HOH HOH . L 5 HOH B 30 630 36 HOH HOH . L 5 HOH B 31 631 37 HOH HOH . L 5 HOH B 32 632 77 HOH HOH . L 5 HOH B 33 633 99 HOH HOH . L 5 HOH B 34 634 54 HOH HOH . L 5 HOH B 35 635 33 HOH HOH . L 5 HOH B 36 636 31 HOH HOH . L 5 HOH B 37 637 78 HOH HOH . L 5 HOH B 38 638 73 HOH HOH . L 5 HOH B 39 639 3 HOH HOH . L 5 HOH B 40 640 68 HOH HOH . L 5 HOH B 41 641 47 HOH HOH . L 5 HOH B 42 642 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 10.249 24.94 -19.979 1 24.45 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . C 2 10.639 23.594 -20.443 1 25.12 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . C 2 9.891 25.995 -21.029 1 28.06 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . C 2 9.079 24.822 -18.962 1 31 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . C 2 8.501 25.984 -18.339 1 24.58 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . C 2 7.043 25.671 -18.105 1 35.24 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . C 2 6.44 26.618 -17.19 1 32.61 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . C 2 6.181 25.67 -19.37 1 28.37 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . C 2 5.493 24.434 -19.458 1 25.78 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . C 2 5.158 26.78 -19.123 1 25.9 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . C 2 3.894 26.4 -19.652 1 25.41 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . C 2 5.109 26.817 -17.598 1 28.21 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . C 2 4.625 28.085 -17.065 1 28.14 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . C 2 4.91 29.331 -17.554 1 24.72 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . C 2 4.323 30.31 -16.905 1 31.47 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . C 2 3.593 29.66 -15.922 1 31.06 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . C 2 2.745 30.131 -14.897 1 38.79 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . C 2 2.475 31.423 -14.685 1 30.9 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . C 2 2.162 29.211 -14.094 1 35.55 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . C 2 2.421 27.92 -14.306 1 26.8 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . C 2 3.207 27.362 -15.232 1 33.52 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . C 2 3.758 28.287 -16.02 1 29.44 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . C 2 18.217 23.274 -24.886 1 21.75 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . C 2 19.265 22.425 -25.042 1 24.76 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . C 2 19.833 21.923 -24.063 1 28.14 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . C 2 19.687 22.092 -26.321 1 27.37 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . C 2 19.162 22.58 -27.493 1 26.8 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . C 2 19.627 22.248 -28.581 1 34.72 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . C 2 18.059 23.492 -27.308 1 24.33 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . C 2 17.515 23.998 -28.362 1 26.14 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . C 2 16.437 24.839 -28.2 1 29.67 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . C 2 15.824 25.361 -29.334 1 20.59 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . C 2 14.745 26.226 -29.226 1 21.03 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . C 2 14.113 26.78 -30.475 1 30.03 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . C 2 14.244 26.552 -27.958 1 22.67 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . C 2 13.071 27.475 -27.806 1 23.09 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . C 2 14.849 26.024 -26.821 1 20.07 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . C 2 15.932 25.167 -26.937 1 23.95 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . C 2 16.542 24.586 -25.812 1 29.7 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . C 2 17.64 23.759 -25.964 1 21.58 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . C 2 16.189 25.055 -24.463 1 24.6 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . C 2 15.253 24.187 -23.654 1 24.59 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . C 2 14.004 24.052 -24.323 1 26 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . C 2 14.962 24.938 -22.354 1 29.39 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . C 2 16.157 25.484 -21.801 1 25.6 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . C 2 14.285 24.093 -21.291 1 26.43 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . C 2 12.979 23.787 -21.774 1 25.25 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . C 2 14.207 24.843 -19.98 1 25.52 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . C 2 13.347 24.116 -19.082 1 28.66 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . C 2 12.367 24.863 -18.118 1 24.58 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . C 2 11.588 23.82 -17.313 1 23.21 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . C 2 13.18 25.912 -17.376 1 30.17 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . C 2 11.41 25.56 -19.104 1 24.11 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 53 #