data_6OIC # _model_server_result.job_id YZRLhZ6P8udbSZloLhwB2A _model_server_result.datetime_utc '2024-11-27 09:09:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 6OIC # _exptl.entry_id 6OIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.29 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UBIQUINONE-1 _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OIC _cell.length_a 76.101 _cell.length_b 108.753 _cell.length_c 131.058 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 161 A CYS 201 1_555 G S H2S . A H2S 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? covale ? covale2 B SG CYS 161 B CYS 201 1_555 J S H2S . B H2S 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? # _chem_comp.formula 'C14 H18 O4' _chem_comp.formula_weight 250.29 _chem_comp.id UQ1 _chem_comp.mon_nstd_flag . _chem_comp.name UBIQUINONE-1 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OIC _atom_sites.fract_transf_matrix[1][1] 0.01314 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 501 FAD FAD . D 3 UQ1 A 1 502 502 UQ1 UQ1 . E 3 UQ1 A 1 503 501 UQ1 UQ1 . F 3 UQ1 A 1 504 502 UQ1 UQ1 . G 4 H2S A 1 505 1 H2S H2S . H 2 FAD B 1 501 501 FAD FAD . I 3 UQ1 B 1 502 501 UQ1 UQ1 . J 4 H2S B 1 503 2 H2S H2S . K 5 HOH A 1 601 53 HOH HOH . K 5 HOH A 2 602 12 HOH HOH . K 5 HOH A 3 603 74 HOH HOH . K 5 HOH A 4 604 100 HOH HOH . K 5 HOH A 5 605 51 HOH HOH . K 5 HOH A 6 606 60 HOH HOH . K 5 HOH A 7 607 105 HOH HOH . K 5 HOH A 8 608 72 HOH HOH . K 5 HOH A 9 609 103 HOH HOH . K 5 HOH A 10 610 14 HOH HOH . K 5 HOH A 11 611 50 HOH HOH . K 5 HOH A 12 612 16 HOH HOH . K 5 HOH A 13 613 102 HOH HOH . K 5 HOH A 14 614 107 HOH HOH . K 5 HOH A 15 615 27 HOH HOH . K 5 HOH A 16 616 43 HOH HOH . K 5 HOH A 17 617 52 HOH HOH . K 5 HOH A 18 618 81 HOH HOH . K 5 HOH A 19 619 108 HOH HOH . K 5 HOH A 20 620 79 HOH HOH . K 5 HOH A 21 621 1 HOH HOH . K 5 HOH A 22 622 32 HOH HOH . K 5 HOH A 23 623 76 HOH HOH . K 5 HOH A 24 624 20 HOH HOH . K 5 HOH A 25 625 28 HOH HOH . K 5 HOH A 26 626 45 HOH HOH . K 5 HOH A 27 627 88 HOH HOH . K 5 HOH A 28 628 9 HOH HOH . K 5 HOH A 29 629 96 HOH HOH . K 5 HOH A 30 630 25 HOH HOH . K 5 HOH A 31 631 110 HOH HOH . K 5 HOH A 32 632 97 HOH HOH . K 5 HOH A 33 633 95 HOH HOH . K 5 HOH A 34 634 83 HOH HOH . K 5 HOH A 35 635 4 HOH HOH . K 5 HOH A 36 636 66 HOH HOH . K 5 HOH A 37 637 91 HOH HOH . K 5 HOH A 38 638 71 HOH HOH . K 5 HOH A 39 639 62 HOH HOH . K 5 HOH A 40 640 98 HOH HOH . K 5 HOH A 41 641 6 HOH HOH . K 5 HOH A 42 642 49 HOH HOH . K 5 HOH A 43 643 35 HOH HOH . K 5 HOH A 44 644 106 HOH HOH . K 5 HOH A 45 645 41 HOH HOH . K 5 HOH A 46 646 115 HOH HOH . K 5 HOH A 47 647 101 HOH HOH . K 5 HOH A 48 648 86 HOH HOH . K 5 HOH A 49 649 11 HOH HOH . K 5 HOH A 50 650 111 HOH HOH . K 5 HOH A 51 651 38 HOH HOH . K 5 HOH A 52 652 59 HOH HOH . K 5 HOH A 53 653 69 HOH HOH . K 5 HOH A 54 654 34 HOH HOH . K 5 HOH A 55 655 24 HOH HOH . K 5 HOH A 56 656 58 HOH HOH . K 5 HOH A 57 657 92 HOH HOH . L 5 HOH B 1 601 82 HOH HOH . L 5 HOH B 2 602 114 HOH HOH . L 5 HOH B 3 603 21 HOH HOH . L 5 HOH B 4 604 65 HOH HOH . L 5 HOH B 5 605 85 HOH HOH . L 5 HOH B 6 606 2 HOH HOH . L 5 HOH B 7 607 23 HOH HOH . L 5 HOH B 8 608 30 HOH HOH . L 5 HOH B 9 609 13 HOH HOH . L 5 HOH B 10 610 70 HOH HOH . L 5 HOH B 11 611 19 HOH HOH . L 5 HOH B 12 612 55 HOH HOH . L 5 HOH B 13 613 48 HOH HOH . L 5 HOH B 14 614 39 HOH HOH . L 5 HOH B 15 615 42 HOH HOH . L 5 HOH B 16 616 18 HOH HOH . L 5 HOH B 17 617 57 HOH HOH . L 5 HOH B 18 618 56 HOH HOH . L 5 HOH B 19 619 8 HOH HOH . L 5 HOH B 20 620 15 HOH HOH . L 5 HOH B 21 621 112 HOH HOH . L 5 HOH B 22 622 75 HOH HOH . L 5 HOH B 23 623 22 HOH HOH . L 5 HOH B 24 624 61 HOH HOH . L 5 HOH B 25 625 5 HOH HOH . L 5 HOH B 26 626 80 HOH HOH . L 5 HOH B 27 627 40 HOH HOH . L 5 HOH B 28 628 7 HOH HOH . L 5 HOH B 29 629 17 HOH HOH . L 5 HOH B 30 630 36 HOH HOH . L 5 HOH B 31 631 37 HOH HOH . L 5 HOH B 32 632 77 HOH HOH . L 5 HOH B 33 633 99 HOH HOH . L 5 HOH B 34 634 54 HOH HOH . L 5 HOH B 35 635 33 HOH HOH . L 5 HOH B 36 636 31 HOH HOH . L 5 HOH B 37 637 78 HOH HOH . L 5 HOH B 38 638 73 HOH HOH . L 5 HOH B 39 639 3 HOH HOH . L 5 HOH B 40 640 68 HOH HOH . L 5 HOH B 41 641 47 HOH HOH . L 5 HOH B 42 642 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UQ1 . . . F 3 24.846 9.266 -12.1 1 69.5 ? C1 UQ1 504 A 1 HETATM 2 O O1 UQ1 . . . F 3 25.643 9.052 -11.249 1 73.13 ? O1 UQ1 504 A 1 HETATM 3 C C2 UQ1 . . . F 3 23.863 8.169 -12.534 1 68.29 ? C2 UQ1 504 A 1 HETATM 4 O O2 UQ1 . . . F 3 23.951 6.917 -11.904 1 77.77 ? O2 UQ1 504 A 1 HETATM 5 C CM2 UQ1 . . . F 3 24.997 6.11 -12.378 1 75.82 ? CM2 UQ1 504 A 1 HETATM 6 C C3 UQ1 . . . F 3 22.813 8.413 -13.634 1 61.52 ? C3 UQ1 504 A 1 HETATM 7 O O3 UQ1 . . . F 3 21.891 7.419 -14.026 1 59.9 ? O3 UQ1 504 A 1 HETATM 8 C CM3 UQ1 . . . F 3 21.992 6.916 -15.335 1 50.94 ? CM3 UQ1 504 A 1 HETATM 9 C C4 UQ1 . . . F 3 22.75 9.79 -14.285 1 60.74 ? C4 UQ1 504 A 1 HETATM 10 O O4 UQ1 . . . F 3 21.965 10.049 -15.139 1 59.54 ? O4 UQ1 504 A 1 HETATM 11 C C5 UQ1 . . . F 3 23.73 10.855 -13.834 1 58.59 ? C5 UQ1 504 A 1 HETATM 12 C CM5 UQ1 . . . F 3 23.73 12.215 -14.459 1 54.8 ? CM5 UQ1 504 A 1 HETATM 13 C C6 UQ1 . . . F 3 24.774 10.637 -12.767 1 66.91 ? C6 UQ1 504 A 1 HETATM 14 C C7 UQ1 . . . F 3 25.683 11.835 -12.454 1 65.54 ? C7 UQ1 504 A 1 HETATM 15 C C8 UQ1 . . . F 3 25.832 12.094 -10.96 1 64.43 ? C8 UQ1 504 A 1 HETATM 16 C C9 UQ1 . . . F 3 26.984 12.575 -10.532 1 72.14 ? C9 UQ1 504 A 1 HETATM 17 C C10 UQ1 . . . F 3 27.181 12.836 -9.042 1 79.27 ? C10 UQ1 504 A 1 HETATM 18 C C11 UQ1 . . . F 3 28.126 12.875 -11.512 1 68.21 ? C11 UQ1 504 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #