data_6OIN # _model_server_result.job_id CoG2YXy2UMKIvYCMNNTHRA _model_server_result.datetime_utc '2024-11-14 21:05:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 6OIN # _exptl.entry_id 6OIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OIN _cell.length_a 46.34 _cell.length_b 56.73 _cell.length_c 121.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 35 A CYS 540 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A SG CYS 38 A CYS 543 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc3 A NE2 HIS 51 A HIS 556 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 A SG CYS 55 A CYS 560 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? covale ? covale1 A C HIS 98 A HIS 603 1_555 A N ALY 99 A ALY 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C ALY 99 A ALY 604 1_555 A N THR 100 A THR 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 6OIN _atom_sites.fract_transf_matrix[1][1] 0.02158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 1 ZN Zn . C 3 MQJ A 1 802 1 MQJ CTX . D 4 GOL A 1 803 1 GOL GOL . E 5 HOH A 1 901 89 HOH HOH . E 5 HOH A 2 902 92 HOH HOH . E 5 HOH A 3 903 69 HOH HOH . E 5 HOH A 4 904 67 HOH HOH . E 5 HOH A 5 905 62 HOH HOH . E 5 HOH A 6 906 63 HOH HOH . E 5 HOH A 7 907 94 HOH HOH . E 5 HOH A 8 908 24 HOH HOH . E 5 HOH A 9 909 64 HOH HOH . E 5 HOH A 10 910 44 HOH HOH . E 5 HOH A 11 911 2 HOH HOH . E 5 HOH A 12 912 101 HOH HOH . E 5 HOH A 13 913 46 HOH HOH . E 5 HOH A 14 914 20 HOH HOH . E 5 HOH A 15 915 5 HOH HOH . E 5 HOH A 16 916 8 HOH HOH . E 5 HOH A 17 917 27 HOH HOH . E 5 HOH A 18 918 102 HOH HOH . E 5 HOH A 19 919 17 HOH HOH . E 5 HOH A 20 920 4 HOH HOH . E 5 HOH A 21 921 13 HOH HOH . E 5 HOH A 22 922 77 HOH HOH . E 5 HOH A 23 923 49 HOH HOH . E 5 HOH A 24 924 37 HOH HOH . E 5 HOH A 25 925 97 HOH HOH . E 5 HOH A 26 926 59 HOH HOH . E 5 HOH A 27 927 85 HOH HOH . E 5 HOH A 28 928 18 HOH HOH . E 5 HOH A 29 929 43 HOH HOH . E 5 HOH A 30 930 50 HOH HOH . E 5 HOH A 31 931 3 HOH HOH . E 5 HOH A 32 932 42 HOH HOH . E 5 HOH A 33 933 99 HOH HOH . E 5 HOH A 34 934 41 HOH HOH . E 5 HOH A 35 935 104 HOH HOH . E 5 HOH A 36 936 7 HOH HOH . E 5 HOH A 37 937 38 HOH HOH . E 5 HOH A 38 938 55 HOH HOH . E 5 HOH A 39 939 72 HOH HOH . E 5 HOH A 40 940 79 HOH HOH . E 5 HOH A 41 941 12 HOH HOH . E 5 HOH A 42 942 61 HOH HOH . E 5 HOH A 43 943 93 HOH HOH . E 5 HOH A 44 944 78 HOH HOH . E 5 HOH A 45 945 25 HOH HOH . E 5 HOH A 46 946 83 HOH HOH . E 5 HOH A 47 947 71 HOH HOH . E 5 HOH A 48 948 81 HOH HOH . E 5 HOH A 49 949 86 HOH HOH . E 5 HOH A 50 950 73 HOH HOH . E 5 HOH A 51 951 36 HOH HOH . E 5 HOH A 52 952 19 HOH HOH . E 5 HOH A 53 953 9 HOH HOH . E 5 HOH A 54 954 35 HOH HOH . E 5 HOH A 55 955 57 HOH HOH . E 5 HOH A 56 956 29 HOH HOH . E 5 HOH A 57 957 75 HOH HOH . E 5 HOH A 58 958 68 HOH HOH . E 5 HOH A 59 959 21 HOH HOH . E 5 HOH A 60 960 11 HOH HOH . E 5 HOH A 61 961 48 HOH HOH . E 5 HOH A 62 962 52 HOH HOH . E 5 HOH A 63 963 84 HOH HOH . E 5 HOH A 64 964 51 HOH HOH . E 5 HOH A 65 965 95 HOH HOH . E 5 HOH A 66 966 16 HOH HOH . E 5 HOH A 67 967 22 HOH HOH . E 5 HOH A 68 968 32 HOH HOH . E 5 HOH A 69 969 60 HOH HOH . E 5 HOH A 70 970 54 HOH HOH . E 5 HOH A 71 971 47 HOH HOH . E 5 HOH A 72 972 26 HOH HOH . E 5 HOH A 73 973 10 HOH HOH . E 5 HOH A 74 974 53 HOH HOH . E 5 HOH A 75 975 34 HOH HOH . E 5 HOH A 76 976 76 HOH HOH . E 5 HOH A 77 977 28 HOH HOH . E 5 HOH A 78 978 56 HOH HOH . E 5 HOH A 79 979 30 HOH HOH . E 5 HOH A 80 980 6 HOH HOH . E 5 HOH A 81 981 45 HOH HOH . E 5 HOH A 82 982 66 HOH HOH . E 5 HOH A 83 983 39 HOH HOH . E 5 HOH A 84 984 14 HOH HOH . E 5 HOH A 85 985 98 HOH HOH . E 5 HOH A 86 986 58 HOH HOH . E 5 HOH A 87 987 74 HOH HOH . E 5 HOH A 88 988 87 HOH HOH . E 5 HOH A 89 989 31 HOH HOH . E 5 HOH A 90 990 90 HOH HOH . E 5 HOH A 91 991 100 HOH HOH . E 5 HOH A 92 992 1 HOH HOH . E 5 HOH A 93 993 82 HOH HOH . E 5 HOH A 94 994 65 HOH HOH . E 5 HOH A 95 995 96 HOH HOH . E 5 HOH A 96 996 40 HOH HOH . E 5 HOH A 97 997 88 HOH HOH . E 5 HOH A 98 998 91 HOH HOH . E 5 HOH A 99 999 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 -0.094 10.628 -19.368 1 35.13 ? C1 GOL 803 A 1 HETATM 2 O O1 GOL . . . D 4 -0.141 9.772 -18.198 1 27.97 ? O1 GOL 803 A 1 HETATM 3 C C2 GOL . . . D 4 0.963 10.076 -20.317 1 41.31 ? C2 GOL 803 A 1 HETATM 4 O O2 GOL . . . D 4 2.038 9.572 -19.52 1 44.26 ? O2 GOL 803 A 1 HETATM 5 C C3 GOL . . . D 4 1.621 11.153 -21.19 1 41.23 ? C3 GOL 803 A 1 HETATM 6 O O3 GOL . . . D 4 2.471 10.376 -22.033 1 43.06 ? O3 GOL 803 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #