data_6OIR
#
_model_server_result.job_id            2uWDX1qKSOUTO2z5Aom8bw 
_model_server_result.datetime_utc      '2024-11-15 00:48:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6oir 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":803}' 
#
_entry.id    6OIR 
#
_exptl.entry_id    6OIR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OIR 
_cell.length_a            46.529 
_cell.length_b            56.831 
_cell.length_c            122.161 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OIR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 98 A HIS 603 1_555 A N ALY 99 A ALY 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 A C ALY 99 A ALY 604 1_555 A N THR 100 A THR 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
metalc ? metalc1 A SG CYS 35 A CYS 540 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc2 A SG CYS 38 A CYS 543 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc3 A NE2 HIS 51 A HIS 556 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc4 A SG CYS 55 A CYS 560 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 157 n n 
C1 C2 GOL sing 158 n n 
C1 H11 GOL sing 159 n n 
C1 H12 GOL sing 160 n n 
O1 HO1 GOL sing 161 n n 
C2 O2 GOL sing 162 n n 
C2 C3 GOL sing 163 n n 
C2 H2 GOL sing 164 n n 
O2 HO2 GOL sing 165 n n 
C3 O3 GOL sing 166 n n 
C3 H31 GOL sing 167 n n 
C3 H32 GOL sing 168 n n 
O3 HO3 GOL sing 169 n n 
#
_atom_sites.entry_id                     6OIR 
_atom_sites.fract_transf_matrix[1][1]    0.021492 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008186 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 801 1 ZN Zn . 
C 3 MNJ A 1 802 1 MNJ CTX . 
D 4 GOL A 1 803 1 GOL GOL . 
E 5 HOH A 1 901 33 HOH HOH . 
E 5 HOH A 2 902 67 HOH HOH . 
E 5 HOH A 3 903 65 HOH HOH . 
E 5 HOH A 4 904 1 HOH HOH . 
E 5 HOH A 5 905 46 HOH HOH . 
E 5 HOH A 6 906 43 HOH HOH . 
E 5 HOH A 7 907 58 HOH HOH . 
E 5 HOH A 8 908 17 HOH HOH . 
E 5 HOH A 9 909 31 HOH HOH . 
E 5 HOH A 10 910 59 HOH HOH . 
E 5 HOH A 11 911 7 HOH HOH . 
E 5 HOH A 12 912 22 HOH HOH . 
E 5 HOH A 13 913 24 HOH HOH . 
E 5 HOH A 14 914 9 HOH HOH . 
E 5 HOH A 15 915 37 HOH HOH . 
E 5 HOH A 16 916 26 HOH HOH . 
E 5 HOH A 17 917 3 HOH HOH . 
E 5 HOH A 18 918 69 HOH HOH . 
E 5 HOH A 19 919 42 HOH HOH . 
E 5 HOH A 20 920 64 HOH HOH . 
E 5 HOH A 21 921 19 HOH HOH . 
E 5 HOH A 22 922 25 HOH HOH . 
E 5 HOH A 23 923 20 HOH HOH . 
E 5 HOH A 24 924 4 HOH HOH . 
E 5 HOH A 25 925 66 HOH HOH . 
E 5 HOH A 26 926 55 HOH HOH . 
E 5 HOH A 27 927 68 HOH HOH . 
E 5 HOH A 28 928 11 HOH HOH . 
E 5 HOH A 29 929 28 HOH HOH . 
E 5 HOH A 30 930 61 HOH HOH . 
E 5 HOH A 31 931 14 HOH HOH . 
E 5 HOH A 32 932 5 HOH HOH . 
E 5 HOH A 33 933 47 HOH HOH . 
E 5 HOH A 34 934 32 HOH HOH . 
E 5 HOH A 35 935 2 HOH HOH . 
E 5 HOH A 36 936 16 HOH HOH . 
E 5 HOH A 37 937 49 HOH HOH . 
E 5 HOH A 38 938 40 HOH HOH . 
E 5 HOH A 39 939 13 HOH HOH . 
E 5 HOH A 40 940 34 HOH HOH . 
E 5 HOH A 41 941 18 HOH HOH . 
E 5 HOH A 42 942 48 HOH HOH . 
E 5 HOH A 43 943 6 HOH HOH . 
E 5 HOH A 44 944 21 HOH HOH . 
E 5 HOH A 45 945 29 HOH HOH . 
E 5 HOH A 46 946 36 HOH HOH . 
E 5 HOH A 47 947 70 HOH HOH . 
E 5 HOH A 48 948 38 HOH HOH . 
E 5 HOH A 49 949 50 HOH HOH . 
E 5 HOH A 50 950 51 HOH HOH . 
E 5 HOH A 51 951 41 HOH HOH . 
E 5 HOH A 52 952 23 HOH HOH . 
E 5 HOH A 53 953 56 HOH HOH . 
E 5 HOH A 54 954 63 HOH HOH . 
E 5 HOH A 55 955 60 HOH HOH . 
E 5 HOH A 56 956 10 HOH HOH . 
E 5 HOH A 57 957 45 HOH HOH . 
E 5 HOH A 58 958 57 HOH HOH . 
E 5 HOH A 59 959 53 HOH HOH . 
E 5 HOH A 60 960 8 HOH HOH . 
E 5 HOH A 61 961 62 HOH HOH . 
E 5 HOH A 62 962 15 HOH HOH . 
E 5 HOH A 63 963 39 HOH HOH . 
E 5 HOH A 64 964 12 HOH HOH . 
E 5 HOH A 65 965 35 HOH HOH . 
E 5 HOH A 66 966 30 HOH HOH . 
E 5 HOH A 67 967 44 HOH HOH . 
E 5 HOH A 68 968 54 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 0.233 10.71 19.33 1 38.49 ? C1 GOL 803 A 1 
HETATM 2 O O1 GOL . . . D 4 0.383 10.02 18.092 1 31.8 ? O1 GOL 803 A 1 
HETATM 3 C C2 GOL . . . D 4 -1.194 11.239 19.409 1 45.84 ? C2 GOL 803 A 1 
HETATM 4 O O2 GOL . . . D 4 -1.966 10.041 19.423 1 48.06 ? O2 GOL 803 A 1 
HETATM 5 C C3 GOL . . . D 4 -1.436 11.926 20.742 1 44.26 ? C3 GOL 803 A 1 
HETATM 6 O O3 GOL . . . D 4 -1.76 10.9 21.706 1 40.44 ? O3 GOL 803 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           36 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           1234 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#