data_6OJQ
#
_model_server_result.job_id            2mPrjk84uVcpT8vAPGqHUg 
_model_server_result.datetime_utc      '2025-07-05 13:14:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ojq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    6OJQ 
#
_exptl.entry_id    6OJQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OJQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OJQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 143 B THR 145 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? 
metalc ? metalc2 D O1G G2P . B G2P 501 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc3 D O3G G2P . B G2P 501 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? 
metalc ? metalc4 D O3B G2P . B G2P 501 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc5 D O2B G2P . B G2P 501 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? 
metalc ? metalc6 B OE2 GLU 71 A GLU 71 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc7 F O2G GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc8 F O3G GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc9 F O3B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? 
metalc ? metalc10 F O1B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 181 n n 
PG O2G GTP sing 182 n n 
PG O3G GTP sing 183 n n 
PG O3B GTP sing 184 n n 
O2G HOG2 GTP sing 185 n n 
O3G HOG3 GTP sing 186 n n 
O3B PB GTP sing 187 n n 
PB O1B GTP doub 188 n n 
PB O2B GTP sing 189 n n 
PB O3A GTP sing 190 n n 
O2B HOB2 GTP sing 191 n n 
O3A PA GTP sing 192 n n 
PA O1A GTP doub 193 n n 
PA O2A GTP sing 194 n n 
PA O5' GTP sing 195 n n 
O2A HOA2 GTP sing 196 n n 
O5' C5' GTP sing 197 n n 
C5' C4' GTP sing 198 n n 
C5' H5' GTP sing 199 n n 
C5' "H5''" GTP sing 200 n n 
C4' O4' GTP sing 201 n n 
C4' C3' GTP sing 202 n n 
C4' H4' GTP sing 203 n n 
O4' C1' GTP sing 204 n n 
C3' O3' GTP sing 205 n n 
C3' C2' GTP sing 206 n n 
C3' H3' GTP sing 207 n n 
O3' HO3' GTP sing 208 n n 
C2' O2' GTP sing 209 n n 
C2' C1' GTP sing 210 n n 
C2' H2' GTP sing 211 n n 
O2' HO2' GTP sing 212 n n 
C1' N9 GTP sing 213 n n 
C1' H1' GTP sing 214 n n 
N9 C8 GTP sing 215 n y 
N9 C4 GTP sing 216 n y 
C8 N7 GTP doub 217 n y 
C8 H8 GTP sing 218 n n 
N7 C5 GTP sing 219 n y 
C5 C6 GTP sing 220 n n 
C5 C4 GTP doub 221 n y 
C6 O6 GTP doub 222 n n 
C6 N1 GTP sing 223 n n 
N1 C2 GTP sing 224 n n 
N1 HN1 GTP sing 225 n n 
C2 N2 GTP sing 226 n n 
C2 N3 GTP doub 227 n n 
N2 HN21 GTP sing 228 n n 
N2 HN22 GTP sing 229 n n 
N3 C4 GTP sing 230 n n 
#
_atom_sites.entry_id                     6OJQ 
_atom_sites.fract_transf_matrix[1][1]    0.001672 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.001672 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001672 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 G2P B 1 501 501 G2P G2P . 
E 5 MG B 1 502 502 MG MG . 
F 6 GTP A 1 501 501 GTP GTP . 
G 5 MG A 1 502 502 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . F 6 303.202 418.087 308.294 1 120.79 ? PG GTP 501 A 1 
HETATM 2 O O1G GTP . . . F 6 303.702 419.34 308.967 1 120.79 ? O1G GTP 501 A 1 
HETATM 3 O O2G GTP . . . F 6 304.141 416.915 308.595 1 120.79 ? O2G GTP 501 A 1 
HETATM 4 O O3G GTP . . . F 6 301.839 417.76 308.78 1 120.79 ? O3G GTP 501 A 1 
HETATM 5 O O3B GTP . . . F 6 303.145 418.325 306.608 1 120.79 ? O3B GTP 501 A 1 
HETATM 6 P PB GTP . . . F 6 302.289 417.291 305.65 1 120.79 ? PB GTP 501 A 1 
HETATM 7 O O1B GTP . . . F 6 302.797 415.913 305.846 1 120.79 ? O1B GTP 501 A 1 
HETATM 8 O O2B GTP . . . F 6 302.41 417.688 304.19 1 120.79 ? O2B GTP 501 A 1 
HETATM 9 O O3A GTP . . . F 6 300.735 417.366 306.1 1 120.79 ? O3A GTP 501 A 1 
HETATM 10 P PA GTP . . . F 6 299.554 416.583 305.289 1 120.79 ? PA GTP 501 A 1 
HETATM 11 O O1A GTP . . . F 6 298.994 415.469 306.16 1 120.79 ? O1A GTP 501 A 1 
HETATM 12 O O2A GTP . . . F 6 300.145 415.987 304.025 1 120.79 ? O2A GTP 501 A 1 
HETATM 13 O O5' GTP . . . F 6 298.378 417.697 304.869 1 120.79 ? O5' GTP 501 A 1 
HETATM 14 C C5' GTP . . . F 6 297.069 417.623 305.428 1 120.79 ? C5' GTP 501 A 1 
HETATM 15 C C4' GTP . . . F 6 296.045 417.458 304.236 1 120.79 ? C4' GTP 501 A 1 
HETATM 16 O O4' GTP . . . F 6 296.474 416.231 303.377 1 120.79 ? O4' GTP 501 A 1 
HETATM 17 C C3' GTP . . . F 6 294.876 417.208 304.677 1 120.79 ? C3' GTP 501 A 1 
HETATM 18 O O3' GTP . . . F 6 293.913 418.159 304.086 1 120.79 ? O3' GTP 501 A 1 
HETATM 19 C C2' GTP . . . F 6 294.507 415.673 304.197 1 120.79 ? C2' GTP 501 A 1 
HETATM 20 O O2' GTP . . . F 6 293.087 415.53 304.011 1 120.79 ? O2' GTP 501 A 1 
HETATM 21 C C1' GTP . . . F 6 295.118 415.569 303.074 1 120.79 ? C1' GTP 501 A 1 
HETATM 22 N N9 GTP . . . F 6 295.291 414.196 302.567 1 120.79 ? N9 GTP 501 A 1 
HETATM 23 C C8 GTP . . . F 6 296.178 413.534 303.363 1 120.79 ? C8 GTP 501 A 1 
HETATM 24 N N7 GTP . . . F 6 296.319 412.291 302.871 1 120.79 ? N7 GTP 501 A 1 
HETATM 25 C C5 GTP . . . F 6 295.547 412.191 301.777 1 120.79 ? C5 GTP 501 A 1 
HETATM 26 C C6 GTP . . . F 6 295.29 411.042 300.792 1 120.79 ? C6 GTP 501 A 1 
HETATM 27 O O6 GTP . . . F 6 295.82 410.021 300.935 1 120.79 ? O6 GTP 501 A 1 
HETATM 28 N N1 GTP . . . F 6 294.384 411.237 299.681 1 120.79 ? N1 GTP 501 A 1 
HETATM 29 C C2 GTP . . . F 6 293.73 412.504 299.509 1 120.79 ? C2 GTP 501 A 1 
HETATM 30 N N2 GTP . . . F 6 292.827 412.718 298.414 1 120.79 ? N2 GTP 501 A 1 
HETATM 31 N N3 GTP . . . F 6 293.979 413.598 300.452 1 120.79 ? N3 GTP 501 A 1 
HETATM 32 C C4 GTP . . . F 6 294.915 413.392 301.595 1 120.79 ? C4 GTP 501 A 1 
HETATM 33 H H5' GTP . . . F 6 296.995 416.865 306.023 1 120.79 ? H5' GTP 501 A 1 
HETATM 34 H "H5''" GTP . . . F 6 296.877 418.439 305.916 1 120.79 ? "H5''" GTP 501 A 1 
HETATM 35 H H4' GTP . . . F 6 296.027 418.257 303.69 1 120.79 ? H4' GTP 501 A 1 
HETATM 36 H H3' GTP . . . F 6 294.864 417.268 305.643 1 120.79 ? H3' GTP 501 A 1 
HETATM 37 H H2' GTP . . . F 6 294.829 415.045 304.858 1 120.79 ? H2' GTP 501 A 1 
HETATM 38 H HO2' GTP . . . F 6 292.868 414.721 304.153 1 120.79 ? HO2' GTP 501 A 1 
HETATM 39 H H1' GTP . . . F 6 294.649 416.1 302.414 1 120.79 ? H1' GTP 501 A 1 
HETATM 40 H H8 GTP . . . F 6 296.764 413.353 304.06 1 120.79 ? H8 GTP 501 A 1 
HETATM 41 H HN1 GTP . . . F 6 294.237 410.598 299.127 1 120.79 ? HN1 GTP 501 A 1 
HETATM 42 H HN21 GTP . . . F 6 292.673 412.087 297.854 1 120.79 ? HN21 GTP 501 A 1 
HETATM 43 H HN22 GTP . . . F 6 292.442 413.481 298.323 1 120.79 ? HN22 GTP 501 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#