data_6OJS
#
_model_server_result.job_id            DTQo9sCKjNnEAMoEFYvEoQ 
_model_server_result.datetime_utc      '2024-10-12 02:26:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ojs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":601}' 
#
_entry.id    6OJS 
#
_exptl.entry_id    6OJS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.48 
_cell.angle_gamma         90 
_cell.entry_id            6OJS 
_cell.length_a            212.622 
_cell.length_b            116.188 
_cell.length_c            220.884 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OJS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F,G,H,I,N,O,P,Q 1 1 
B,E,J,K,L,M,V,W,X,Y 2 1 
D,R,S,T,U 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 J N N 
? 2 N N N 
? 2 R N N 
? 2 V N N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 343 n n 
PA O2A NDP sing 344 n n 
PA O5B NDP sing 345 n n 
PA O3 NDP sing 346 n n 
O2A HOA2 NDP sing 347 n n 
O5B C5B NDP sing 348 n n 
C5B C4B NDP sing 349 n n 
C5B H51A NDP sing 350 n n 
C5B H52A NDP sing 351 n n 
C4B O4B NDP sing 352 n n 
C4B C3B NDP sing 353 n n 
C4B H4B NDP sing 354 n n 
O4B C1B NDP sing 355 n n 
C3B O3B NDP sing 356 n n 
C3B C2B NDP sing 357 n n 
C3B H3B NDP sing 358 n n 
O3B HO3A NDP sing 359 n n 
C2B O2B NDP sing 360 n n 
C2B C1B NDP sing 361 n n 
C2B H2B NDP sing 362 n n 
O2B P2B NDP sing 363 n n 
C1B N9A NDP sing 364 n n 
C1B H1B NDP sing 365 n n 
N9A C8A NDP sing 366 n y 
N9A C4A NDP sing 367 n y 
C8A N7A NDP doub 368 n y 
C8A H8A NDP sing 369 n n 
N7A C5A NDP sing 370 n y 
C5A C6A NDP sing 371 n y 
C5A C4A NDP doub 372 n y 
C6A N6A NDP sing 373 n n 
C6A N1A NDP doub 374 n y 
N6A H61A NDP sing 375 n n 
N6A H62A NDP sing 376 n n 
N1A C2A NDP sing 377 n y 
C2A N3A NDP doub 378 n y 
C2A H2A NDP sing 379 n n 
N3A C4A NDP sing 380 n y 
O3 PN NDP sing 381 n n 
PN O1N NDP doub 382 n n 
PN O2N NDP sing 383 n n 
PN O5D NDP sing 384 n n 
O2N H21N NDP sing 385 n n 
O5D C5D NDP sing 386 n n 
C5D C4D NDP sing 387 n n 
C5D H51N NDP sing 388 n n 
C5D H52N NDP sing 389 n n 
C4D O4D NDP sing 390 n n 
C4D C3D NDP sing 391 n n 
C4D H4D NDP sing 392 n n 
O4D C1D NDP sing 393 n n 
C3D O3D NDP sing 394 n n 
C3D C2D NDP sing 395 n n 
C3D H3D NDP sing 396 n n 
O3D HO3N NDP sing 397 n n 
C2D O2D NDP sing 398 n n 
C2D C1D NDP sing 399 n n 
C2D H2D NDP sing 400 n n 
O2D HO2N NDP sing 401 n n 
C1D N1N NDP sing 402 n n 
C1D H1D NDP sing 403 n n 
N1N C2N NDP sing 404 n n 
N1N C6N NDP sing 405 n n 
C2N C3N NDP doub 406 n n 
C2N H2N NDP sing 407 n n 
C3N C7N NDP sing 408 n n 
C3N C4N NDP sing 409 n n 
C7N O7N NDP doub 410 n n 
C7N N7N NDP sing 411 n n 
N7N H71N NDP sing 412 n n 
N7N H72N NDP sing 413 n n 
C4N C5N NDP sing 414 n n 
C4N H41N NDP sing 415 n n 
C4N H42N NDP sing 416 n n 
C5N C6N NDP doub 417 n n 
C5N H5N NDP sing 418 n n 
C6N H6N NDP sing 419 n n 
P2B O1X NDP doub 420 n n 
P2B O2X NDP sing 421 n n 
P2B O3X NDP sing 422 n n 
O2X HOP2 NDP sing 423 n n 
O3X HOP3 NDP sing 424 n n 
#
_atom_sites.entry_id                     6OJS 
_atom_sites.fract_transf_matrix[1][1]    0.004703 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000452 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008607 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004548 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 NDP A 1 601 601 NDP NDP . 
G 3 UFP A 1 602 602 UFP UFP . 
H 4 D96 A 1 603 603 D96 D96 . 
I 5 MTX A 1 604 604 MTX MTX . 
J 2 NDP B 1 601 601 NDP NDP . 
K 3 UFP B 1 602 602 UFP UFP . 
L 4 D96 B 1 603 603 D96 D96 . 
M 5 MTX B 1 604 604 MTX MTX . 
N 2 NDP C 1 601 601 NDP NDP . 
O 3 UFP C 1 602 602 UFP UFP . 
P 4 D96 C 1 603 603 D96 D96 . 
Q 5 MTX C 1 604 604 MTX MTX . 
R 2 NDP D 1 601 601 NDP NDP . 
S 3 UFP D 1 602 602 UFP UFP . 
T 4 D96 D 1 603 603 D96 D96 . 
U 5 MTX D 1 604 604 MTX MTX . 
V 2 NDP E 1 601 601 NDP NDP . 
W 3 UFP E 1 602 602 UFP UFP . 
X 4 D96 E 1 603 603 D96 D96 . 
Y 5 MTX E 1 604 604 MTX MTX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . V 2 -71.924 -84.441 16.863 1 90.77 ? PA NDP 601 E 1 
HETATM 2 O O1A NDP . . . V 2 -70.791 -84.195 17.833 1 94.73 ? O1A NDP 601 E 1 
HETATM 3 O O2A NDP . . . V 2 -73.017 -83.448 17.122 1 92.19 ? O2A NDP 601 E 1 
HETATM 4 O O5B NDP . . . V 2 -71.426 -84.267 15.422 1 99.7 ? O5B NDP 601 E 1 
HETATM 5 C C5B NDP . . . V 2 -70.392 -85.083 14.938 1 100.86 ? C5B NDP 601 E 1 
HETATM 6 C C4B NDP . . . V 2 -69.944 -84.915 13.546 1 98.13 ? C4B NDP 601 E 1 
HETATM 7 O O4B NDP . . . V 2 -69.166 -83.747 13.41 1 99.86 ? O4B NDP 601 E 1 
HETATM 8 C C3B NDP . . . V 2 -69.065 -86.011 13.134 1 101.43 ? C3B NDP 601 E 1 
HETATM 9 O O3B NDP . . . V 2 -69.783 -87.078 12.624 1 99.09 ? O3B NDP 601 E 1 
HETATM 10 C C2B NDP . . . V 2 -68.234 -85.408 12.124 1 108.65 ? C2B NDP 601 E 1 
HETATM 11 O O2B NDP . . . V 2 -68.898 -85.301 10.9 1 108.33 ? O2B NDP 601 E 1 
HETATM 12 C C1B NDP . . . V 2 -68.027 -84.066 12.627 1 104.9 ? C1B NDP 601 E 1 
HETATM 13 N N9A NDP . . . V 2 -66.838 -84.013 13.405 1 106.57 ? N9A NDP 601 E 1 
HETATM 14 C C8A NDP . . . V 2 -66.755 -84.167 14.747 1 110.32 ? C8A NDP 601 E 1 
HETATM 15 N N7A NDP . . . V 2 -65.468 -84.049 15.131 1 114.09 ? N7A NDP 601 E 1 
HETATM 16 C C5A NDP . . . V 2 -64.704 -83.811 14.013 1 112.88 ? C5A NDP 601 E 1 
HETATM 17 C C6A NDP . . . V 2 -63.322 -83.603 13.778 1 110.26 ? C6A NDP 601 E 1 
HETATM 18 N N6A NDP . . . V 2 -62.372 -83.622 14.918 1 114.53 ? N6A NDP 601 E 1 
HETATM 19 N N1A NDP . . . V 2 -62.867 -83.387 12.514 1 108.36 ? N1A NDP 601 E 1 
HETATM 20 C C2A NDP . . . V 2 -63.754 -83.375 11.485 1 111.13 ? C2A NDP 601 E 1 
HETATM 21 N N3A NDP . . . V 2 -65.065 -83.563 11.657 1 111.5 ? N3A NDP 601 E 1 
HETATM 22 C C4A NDP . . . V 2 -65.576 -83.787 12.922 1 109.24 ? C4A NDP 601 E 1 
HETATM 23 O O3 NDP . . . V 2 -72.503 -85.912 17.052 1 93.98 ? O3 NDP 601 E 1 
HETATM 24 P PN NDP . . . V 2 -73.199 -86.369 18.403 1 97.44 ? PN NDP 601 E 1 
HETATM 25 O O1N NDP . . . V 2 -73.75 -87.795 18.269 1 88.79 ? O1N NDP 601 E 1 
HETATM 26 O O2N NDP . . . V 2 -72.179 -86.333 19.517 1 95.16 ? O2N NDP 601 E 1 
HETATM 27 O O5D NDP . . . V 2 -74.429 -85.371 18.735 1 88.85 ? O5D NDP 601 E 1 
HETATM 28 C C5D NDP . . . V 2 -75.737 -85.786 18.447 1 84.71 ? C5D NDP 601 E 1 
HETATM 29 C C4D NDP . . . V 2 -76.642 -85.993 19.564 1 86.57 ? C4D NDP 601 E 1 
HETATM 30 O O4D NDP . . . V 2 -76.319 -85.078 20.605 1 90.45 ? O4D NDP 601 E 1 
HETATM 31 C C3D NDP . . . V 2 -78.032 -85.714 19.183 1 88.87 ? C3D NDP 601 E 1 
HETATM 32 O O3D NDP . . . V 2 -78.888 -86.575 19.857 1 87.07 ? O3D NDP 601 E 1 
HETATM 33 C C2D NDP . . . V 2 -78.268 -84.389 19.64 1 88.08 ? C2D NDP 601 E 1 
HETATM 34 O O2D NDP . . . V 2 -79.624 -84.218 19.913 1 82.59 ? O2D NDP 601 E 1 
HETATM 35 C C1D NDP . . . V 2 -77.458 -84.335 20.872 1 89.6 ? C1D NDP 601 E 1 
HETATM 36 N N1N NDP . . . V 2 -77.122 -82.991 21.227 1 88.65 ? N1N NDP 601 E 1 
HETATM 37 C C2N NDP . . . V 2 -77.47 -82.556 22.447 1 84.53 ? C2N NDP 601 E 1 
HETATM 38 C C3N NDP . . . V 2 -77.169 -81.254 22.86 1 84.96 ? C3N NDP 601 E 1 
HETATM 39 C C7N NDP . . . V 2 -77.586 -80.825 24.254 1 87.72 ? C7N NDP 601 E 1 
HETATM 40 O O7N NDP . . . V 2 -77.193 -79.736 24.695 1 88.74 ? O7N NDP 601 E 1 
HETATM 41 N N7N NDP . . . V 2 -78.412 -81.662 25.077 1 86.38 ? N7N NDP 601 E 1 
HETATM 42 C C4N NDP . . . V 2 -76.49 -80.385 21.989 1 84.45 ? C4N NDP 601 E 1 
HETATM 43 C C5N NDP . . . V 2 -76.141 -80.872 20.724 1 87.13 ? C5N NDP 601 E 1 
HETATM 44 C C6N NDP . . . V 2 -76.46 -82.176 20.352 1 88.65 ? C6N NDP 601 E 1 
HETATM 45 P P2B NDP . . . V 2 -68.492 -86.17 9.671 1 110.06 ? P2B NDP 601 E 1 
HETATM 46 O O1X NDP . . . V 2 -69.491 -87.335 9.545 1 103.04 ? O1X NDP 601 E 1 
HETATM 47 O O2X NDP . . . V 2 -68.533 -85.327 8.466 1 101.26 ? O2X NDP 601 E 1 
HETATM 48 O O3X NDP . . . V 2 -67.11 -86.713 9.829 1 114.94 ? O3X NDP 601 E 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#