data_6OJS
#
_model_server_result.job_id            Q_Rvwqw_2kvANkxcf7Cu7g 
_model_server_result.datetime_utc      '2024-10-12 02:19:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ojs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":603}' 
#
_entry.id    6OJS 
#
_exptl.entry_id    6OJS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              413.384 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-{4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}-D-glutamic acid' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.48 
_cell.angle_gamma         90 
_cell.entry_id            6OJS 
_cell.length_a            212.622 
_cell.length_b            116.188 
_cell.length_c            220.884 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OJS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F,G,H,I,N,O,P,Q 1 1 
B,E,J,K,L,M,V,W,X,Y 2 1 
D,R,S,T,U 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 L N N 
? 4 P N N 
? 4 T N N 
? 4 X N N 
#
_chem_comp.formula           'C19 H19 N5 O6' 
_chem_comp.formula_weight    413.384 
_chem_comp.id                D96 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-{4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}-D-glutamic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5 C19 D96 doub 83 n n 
O4 C17 D96 doub 84 n n 
C19 O6 D96 sing 85 n n 
C19 C18 D96 sing 86 n n 
C17 C15 D96 sing 87 n n 
C17 O3 D96 sing 88 n n 
C15 C16 D96 sing 89 n n 
C15 N5 D96 sing 90 n n 
C16 C18 D96 sing 91 n n 
O2 C14 D96 doub 92 n n 
N5 C14 D96 sing 93 n n 
C14 C11 D96 sing 94 n n 
C11 C12 D96 doub 95 n y 
C11 C10 D96 sing 96 n y 
C12 C13 D96 sing 97 n y 
N4 C4 D96 sing 98 n n 
C10 C9 D96 doub 99 n y 
N2 C4 D96 sing 100 n n 
N2 C3 D96 sing 101 n n 
O1 C3 D96 doub 102 n n 
C4 N1 D96 doub 103 n n 
C3 C2 D96 sing 104 n n 
C13 C8 D96 doub 105 n y 
C9 C8 D96 sing 106 n y 
C8 C7 D96 sing 107 n n 
N1 C1 D96 sing 108 n n 
C2 C1 D96 doub 109 n y 
C2 C5 D96 sing 110 n y 
C1 N3 D96 sing 111 n y 
C5 C7 D96 sing 112 n n 
C5 C6 D96 doub 113 n y 
N3 C6 D96 sing 114 n y 
N2 H1 D96 sing 115 n n 
C6 H2 D96 sing 116 n n 
N3 H3 D96 sing 117 n n 
N4 H4 D96 sing 118 n n 
N4 H5 D96 sing 119 n n 
C7 H6 D96 sing 120 n n 
C7 H7 D96 sing 121 n n 
C9 H8 D96 sing 122 n n 
C10 H9 D96 sing 123 n n 
C12 H10 D96 sing 124 n n 
C13 H11 D96 sing 125 n n 
N5 H12 D96 sing 126 n n 
C15 H13 D96 sing 127 n n 
C16 H14 D96 sing 128 n n 
C16 H15 D96 sing 129 n n 
O3 H16 D96 sing 130 n n 
C18 H17 D96 sing 131 n n 
C18 H18 D96 sing 132 n n 
O6 H19 D96 sing 133 n n 
#
_atom_sites.entry_id                     6OJS 
_atom_sites.fract_transf_matrix[1][1]    0.004703 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000452 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008607 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004548 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 NDP A 1 601 601 NDP NDP . 
G 3 UFP A 1 602 602 UFP UFP . 
H 4 D96 A 1 603 603 D96 D96 . 
I 5 MTX A 1 604 604 MTX MTX . 
J 2 NDP B 1 601 601 NDP NDP . 
K 3 UFP B 1 602 602 UFP UFP . 
L 4 D96 B 1 603 603 D96 D96 . 
M 5 MTX B 1 604 604 MTX MTX . 
N 2 NDP C 1 601 601 NDP NDP . 
O 3 UFP C 1 602 602 UFP UFP . 
P 4 D96 C 1 603 603 D96 D96 . 
Q 5 MTX C 1 604 604 MTX MTX . 
R 2 NDP D 1 601 601 NDP NDP . 
S 3 UFP D 1 602 602 UFP UFP . 
T 4 D96 D 1 603 603 D96 D96 . 
U 5 MTX D 1 604 604 MTX MTX . 
V 2 NDP E 1 601 601 NDP NDP . 
W 3 UFP E 1 602 602 UFP UFP . 
X 4 D96 E 1 603 603 D96 D96 . 
Y 5 MTX E 1 604 604 MTX MTX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 D96 . . . T 4 -18.234 -36.635 6.17 1 115.43 ? N1 D96 603 D 1 
HETATM 2 C C1 D96 . . . T 4 -17.489 -36.688 7.308 1 117.5 ? C1 D96 603 D 1 
HETATM 3 C C2 D96 . . . T 4 -17.131 -35.599 8.096 1 119.7 ? C2 D96 603 D 1 
HETATM 4 C C3 D96 . . . T 4 -17.575 -34.266 7.694 1 116.62 ? C3 D96 603 D 1 
HETATM 5 N N2 D96 . . . T 4 -18.312 -34.336 6.545 1 109.64 ? N2 D96 603 D 1 
HETATM 6 C C4 D96 . . . T 4 -18.634 -35.458 5.81 1 111.81 ? C4 D96 603 D 1 
HETATM 7 C C5 D96 . . . T 4 -16.362 -36.096 9.162 1 119.22 ? C5 D96 603 D 1 
HETATM 8 C C6 D96 . . . T 4 -16.277 -37.478 9.006 1 116.26 ? C6 D96 603 D 1 
HETATM 9 N N3 D96 . . . T 4 -16.968 -37.822 7.865 1 118.37 ? N3 D96 603 D 1 
HETATM 10 O O1 D96 . . . T 4 -17.368 -33.185 8.245 1 118.51 ? O1 D96 603 D 1 
HETATM 11 N N4 D96 . . . T 4 -19.44 -35.257 4.61 1 112.47 ? N4 D96 603 D 1 
HETATM 12 C C7 D96 . . . T 4 -15.769 -35.281 10.273 1 116.12 ? C7 D96 603 D 1 
HETATM 13 C C8 D96 . . . T 4 -16.909 -34.746 11.087 1 110.1 ? C8 D96 603 D 1 
HETATM 14 C C9 D96 . . . T 4 -18.068 -35.503 11.2 1 107.01 ? C9 D96 603 D 1 
HETATM 15 C C10 D96 . . . T 4 -19.139 -35.035 11.944 1 107.19 ? C10 D96 603 D 1 
HETATM 16 C C11 D96 . . . T 4 -19.059 -33.803 12.575 1 109.36 ? C11 D96 603 D 1 
HETATM 17 C C12 D96 . . . T 4 -17.904 -33.037 12.463 1 106.45 ? C12 D96 603 D 1 
HETATM 18 C C13 D96 . . . T 4 -16.828 -33.508 11.716 1 105.09 ? C13 D96 603 D 1 
HETATM 19 C C14 D96 . . . T 4 -20.241 -33.332 13.368 1 109.62 ? C14 D96 603 D 1 
HETATM 20 O O2 D96 . . . T 4 -21.41 -33.526 13.056 1 107.7 ? O2 D96 603 D 1 
HETATM 21 N N5 D96 . . . T 4 -19.905 -32.669 14.475 1 113.28 ? N5 D96 603 D 1 
HETATM 22 C C15 D96 . . . T 4 -20.866 -32.117 15.432 1 118.22 ? C15 D96 603 D 1 
HETATM 23 C C16 D96 . . . T 4 -21.42 -30.799 14.965 1 111.7 ? C16 D96 603 D 1 
HETATM 24 C C17 D96 . . . T 4 -20.222 -31.951 16.779 1 120.53 ? C17 D96 603 D 1 
HETATM 25 O O3 D96 . . . T 4 -19.838 -30.908 17.296 1 115.54 ? O3 D96 603 D 1 
HETATM 26 O O4 D96 . . . T 4 -20.118 -33.161 17.386 1 113.55 -1 O4 D96 603 D 1 
HETATM 27 C C18 D96 . . . T 4 -20.466 -30.102 14.043 1 107.96 ? C18 D96 603 D 1 
HETATM 28 C C19 D96 . . . T 4 -19.657 -29.095 14.802 1 113.3 ? C19 D96 603 D 1 
HETATM 29 O O5 D96 . . . T 4 -18.44 -28.969 14.8 1 114.25 ? O5 D96 603 D 1 
HETATM 30 O O6 D96 . . . T 4 -20.488 -28.306 15.528 1 113.9 -1 O6 D96 603 D 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#