data_6OJT # _model_server_result.job_id VBbvQ6_-8ZGyeV_b5GXfKg _model_server_result.datetime_utc '2024-11-05 09:29:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ojt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6OJT # _exptl.entry_id 6OJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 198.221 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-Hydroxyazobenzene _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6OJT _cell.length_a 181.909 _cell.length_b 181.909 _cell.length_c 96.431 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 217 B HIS 218 1_555 D FE FE . B FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc2 A NE2 HIS 281 B HIS 282 1_555 D FE FE . B FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc3 A NE2 HIS 471 B HIS 472 1_555 D FE FE . B FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc4 B NE2 HIS 217 A HIS 218 1_555 F FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc5 B NE2 HIS 281 A HIS 282 1_555 F FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc6 B NE2 HIS 471 A HIS 472 1_555 F FE FE . A FE 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'C12 H10 N2 O' _chem_comp.formula_weight 198.221 _chem_comp.id NSL _chem_comp.mon_nstd_flag . _chem_comp.name 4-Hydroxyazobenzene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-[(E)-phenyldiazenyl]phenol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C03 NSL doub 237 n y C02 C01 NSL sing 238 n y C14 C13 NSL doub 239 n y C14 C09 NSL sing 240 n y C03 C04 NSL sing 241 n y C13 C12 NSL sing 242 n y N08 C09 NSL sing 243 n n N08 N07 NSL doub 244 n n C01 C06 NSL doub 245 n y C09 C10 NSL doub 246 n y C04 N07 NSL sing 247 n n C04 C05 NSL doub 248 n y C12 O15 NSL sing 249 n n C12 C11 NSL doub 250 n y C06 C05 NSL sing 251 n y C10 C11 NSL sing 252 n y C01 H1 NSL sing 253 n n C02 H2 NSL sing 254 n n C03 H3 NSL sing 255 n n C05 H4 NSL sing 256 n n C06 H5 NSL sing 257 n n C10 H6 NSL sing 258 n n C11 H7 NSL sing 259 n n C13 H8 NSL sing 260 n n C14 H9 NSL sing 261 n n O15 H10 NSL sing 262 n n # _atom_sites.entry_id 6OJT _atom_sites.fract_transf_matrix[1][1] 0.005497 _atom_sites.fract_transf_matrix[1][2] 0.003174 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01037 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NSL B 1 501 2 NSL NSL . D 3 FE B 1 502 2 FE FE . E 2 NSL A 1 501 1 NSL NSL . F 3 FE A 1 502 1 FE FE . G 4 HOH B 1 601 2 HOH HOH . H 4 HOH A 1 601 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 NSL . . . C 2 -98.799 24.334 -11.354 1 74.36 ? C01 NSL 501 B 1 HETATM 2 C C02 NSL . . . C 2 -98.925 25.092 -10.202 1 65.84 ? C02 NSL 501 B 1 HETATM 3 C C03 NSL . . . C 2 -98.202 24.755 -9.071 1 64.4 ? C03 NSL 501 B 1 HETATM 4 C C04 NSL . . . C 2 -97.359 23.654 -9.087 1 78.4 ? C04 NSL 501 B 1 HETATM 5 C C05 NSL . . . C 2 -97.235 22.892 -10.239 1 79.63 ? C05 NSL 501 B 1 HETATM 6 C C06 NSL . . . C 2 -97.957 23.234 -11.373 1 79.25 ? C06 NSL 501 B 1 HETATM 7 C C09 NSL . . . C 2 -96.032 23.711 -5.661 1 67.11 ? C09 NSL 501 B 1 HETATM 8 C C10 NSL . . . C 2 -95.116 22.676 -5.591 1 64 ? C10 NSL 501 B 1 HETATM 9 C C11 NSL . . . C 2 -94.441 22.428 -4.405 1 59.86 ? C11 NSL 501 B 1 HETATM 10 C C12 NSL . . . C 2 -94.684 23.216 -3.291 1 60.5 ? C12 NSL 501 B 1 HETATM 11 C C13 NSL . . . C 2 -95.602 24.248 -3.361 1 72.04 ? C13 NSL 501 B 1 HETATM 12 C C14 NSL . . . C 2 -96.277 24.494 -4.544 1 68.44 ? C14 NSL 501 B 1 HETATM 13 N N07 NSL . . . C 2 -96.597 23.316 -7.896 1 77.94 ? N07 NSL 501 B 1 HETATM 14 N N08 NSL . . . C 2 -96.751 23.991 -6.893 1 77.21 ? N08 NSL 501 B 1 HETATM 15 O O15 NSL . . . C 2 -94.005 22.971 -2.092 1 60.93 ? O15 NSL 501 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #