data_6OJV
#
_model_server_result.job_id            V538GERWv0FCIvt2PHBFkQ 
_model_server_result.datetime_utc      '2024-11-15 05:01:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ojv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":601}' 
#
_entry.id    6OJV 
#
_exptl.entry_id    6OJV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              413.384 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-{4-[(2-amino-4-hydroxy-7H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzoyl}-L-glutamic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          128.92 
_cell.angle_gamma         90 
_cell.entry_id            6OJV 
_cell.length_a            154.95 
_cell.length_b            103.033 
_cell.length_c            109.211 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OJV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,I,J,M,O 1 1 
B,D,G,H,K,L,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C19 H19 N5 O6' 
_chem_comp.formula_weight    413.384 
_chem_comp.id                2XB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-{4-[(2-amino-4-hydroxy-7H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzoyl}-L-glutamic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OT1 CT5 2XB doub 1 n n 
CT5 CT1 2XB sing 2 n n 
CT5 OXT 2XB sing 3 n n 
NAA CAW 2XB sing 4 n n 
CT1 CT2 2XB sing 5 n n 
CT1 NT1 2XB sing 6 n n 
CT2 CT3 2XB sing 7 n n 
CAW NAS 2XB sing 8 n y 
CAW NAP 2XB doub 9 n y 
OAD CAV 2XB doub 10 n n 
NAS CBA 2XB doub 11 n y 
OE2 CT4 2XB doub 12 n n 
NT1 CAV 2XB sing 13 n n 
CAV CAY 2XB sing 14 n n 
CT3 CT4 2XB sing 15 n n 
NAP CBB 2XB sing 16 n y 
CT4 OE1 2XB sing 17 n n 
CAJ CAY 2XB doub 18 n y 
CAJ CAH 2XB sing 19 n y 
CBA OAE 2XB sing 20 n n 
CBA CBC 2XB sing 21 n y 
CAY CAK 2XB sing 22 n y 
CBB CBC 2XB doub 23 n y 
CBB NAR 2XB sing 24 n y 
CAH CAX 2XB doub 25 n y 
CBC CAZ 2XB sing 26 n y 
CAK CAI 2XB doub 27 n y 
NAR CAL 2XB sing 28 n y 
CAX CAI 2XB sing 29 n y 
CAX CAO 2XB sing 30 n n 
CAZ CAL 2XB doub 31 n y 
CAZ CAO 2XB sing 32 n n 
OE1 H1 2XB sing 33 n n 
CT3 H2 2XB sing 34 n n 
CT2 H3 2XB sing 35 n n 
CT1 H4 2XB sing 36 n n 
OXT H5 2XB sing 37 n n 
NT1 H6 2XB sing 38 n n 
CAJ H7 2XB sing 39 n n 
CAH H8 2XB sing 40 n n 
CAK H9 2XB sing 41 n n 
CAI H10 2XB sing 42 n n 
CAO H11 2XB sing 43 n n 
CAO H12 2XB sing 44 n n 
NAA H14 2XB sing 45 n n 
NAA H15 2XB sing 46 n n 
NAR H16 2XB sing 47 n n 
CAL H17 2XB sing 48 n n 
CT3 H18 2XB sing 49 n n 
CT2 H19 2XB sing 50 n n 
OAE H20 2XB sing 51 n n 
#
_atom_sites.entry_id                     6OJV 
_atom_sites.fract_transf_matrix[1][1]    0.006454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005211 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011769 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 UMP B 1 600 600 UMP UMP . 
F 3 2XB B 1 601 601 2XB 906 . 
G 2 UMP A 1 600 600 UMP UMP . 
H 3 2XB A 1 601 601 2XB 906 . 
I 2 UMP C 1 600 600 UMP UMP . 
J 3 2XB C 1 601 601 2XB 906 . 
K 2 UMP D 1 600 600 UMP UMP . 
L 3 2XB D 1 601 601 2XB 906 . 
M 4 HOH B 1 701 16 HOH HOH . 
M 4 HOH B 2 702 14 HOH HOH . 
M 4 HOH B 3 703 18 HOH HOH . 
M 4 HOH B 4 704 26 HOH HOH . 
M 4 HOH B 5 705 21 HOH HOH . 
M 4 HOH B 6 706 28 HOH HOH . 
M 4 HOH B 7 707 19 HOH HOH . 
M 4 HOH B 8 708 5 HOH HOH . 
M 4 HOH B 9 709 10 HOH HOH . 
M 4 HOH B 10 710 9 HOH HOH . 
M 4 HOH B 11 711 3 HOH HOH . 
M 4 HOH B 12 712 13 HOH HOH . 
M 4 HOH B 13 713 37 HOH HOH . 
N 4 HOH A 1 701 34 HOH HOH . 
N 4 HOH A 2 702 23 HOH HOH . 
N 4 HOH A 3 703 8 HOH HOH . 
N 4 HOH A 4 704 22 HOH HOH . 
N 4 HOH A 5 705 6 HOH HOH . 
N 4 HOH A 6 706 11 HOH HOH . 
O 4 HOH C 1 701 4 HOH HOH . 
O 4 HOH C 2 702 30 HOH HOH . 
O 4 HOH C 3 703 2 HOH HOH . 
O 4 HOH C 4 704 36 HOH HOH . 
O 4 HOH C 5 705 20 HOH HOH . 
O 4 HOH C 6 706 1 HOH HOH . 
O 4 HOH C 7 707 24 HOH HOH . 
P 4 HOH D 1 701 27 HOH HOH . 
P 4 HOH D 2 702 33 HOH HOH . 
P 4 HOH D 3 703 29 HOH HOH . 
P 4 HOH D 4 704 31 HOH HOH . 
P 4 HOH D 5 705 35 HOH HOH . 
P 4 HOH D 6 706 38 HOH HOH . 
P 4 HOH D 7 707 17 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OE1 2XB . . . L 3 134.105 -18.886 297.973 1 91.35 ? OE1 2XB 601 D 1 
HETATM 2 C CT4 2XB . . . L 3 134.081 -18.736 299.193 1 93.2 ? CT4 2XB 601 D 1 
HETATM 3 O OE2 2XB . . . L 3 135.162 -18.346 299.926 1 96.08 -1 OE2 2XB 601 D 1 
HETATM 4 C CT3 2XB . . . L 3 132.849 -18.959 300.074 1 88.65 ? CT3 2XB 601 D 1 
HETATM 5 C CT2 2XB . . . L 3 131.875 -17.759 300.101 1 89.86 ? CT2 2XB 601 D 1 
HETATM 6 C CT1 2XB . . . L 3 130.377 -18.105 299.871 1 87.51 ? CT1 2XB 601 D 1 
HETATM 7 C CT5 2XB . . . L 3 129.388 -17.535 300.898 1 91.97 ? CT5 2XB 601 D 1 
HETATM 8 O OT1 2XB . . . L 3 128.611 -18.424 301.58 1 93.92 -1 OT1 2XB 601 D 1 
HETATM 9 O OXT 2XB . . . L 3 129.293 -16.324 301.103 1 88.06 ? OXT 2XB 601 D 1 
HETATM 10 N NT1 2XB . . . L 3 129.911 -17.847 298.502 1 87.14 ? NT1 2XB 601 D 1 
HETATM 11 C CAV 2XB . . . L 3 130.383 -18.373 297.356 1 85.58 ? CAV 2XB 601 D 1 
HETATM 12 O OAD 2XB . . . L 3 131.306 -19.183 297.307 1 84.36 ? OAD 2XB 601 D 1 
HETATM 13 C CAY 2XB . . . L 3 129.704 -17.94 296.086 1 81.72 ? CAY 2XB 601 D 1 
HETATM 14 C CAJ 2XB . . . L 3 130.057 -18.555 294.863 1 80.71 ? CAJ 2XB 601 D 1 
HETATM 15 C CAH 2XB . . . L 3 129.433 -18.17 293.664 1 79.75 ? CAH 2XB 601 D 1 
HETATM 16 C CAK 2XB . . . L 3 128.709 -16.933 296.083 1 78.43 ? CAK 2XB 601 D 1 
HETATM 17 C CAI 2XB . . . L 3 128.081 -16.55 294.878 1 75.43 ? CAI 2XB 601 D 1 
HETATM 18 C CAX 2XB . . . L 3 128.446 -17.168 293.663 1 77.69 ? CAX 2XB 601 D 1 
HETATM 19 C CAO 2XB . . . L 3 127.791 -16.785 292.35 1 74.67 ? CAO 2XB 601 D 1 
HETATM 20 C CAZ 2XB . . . L 3 127.852 -17.927 291.363 1 77.26 ? CAZ 2XB 601 D 1 
HETATM 21 C CBC 2XB . . . L 3 127.077 -19.137 291.364 1 77.65 ? CBC 2XB 601 D 1 
HETATM 22 C CBA 2XB . . . L 3 126.015 -19.706 292.222 1 76.51 ? CBA 2XB 601 D 1 
HETATM 23 O OAE 2XB . . . L 3 125.581 -19.129 293.217 1 78.49 ? OAE 2XB 601 D 1 
HETATM 24 N NAS 2XB . . . L 3 125.551 -20.912 291.839 1 78.71 ? NAS 2XB 601 D 1 
HETATM 25 C CAW 2XB . . . L 3 126.033 -21.588 290.707 1 76.93 ? CAW 2XB 601 D 1 
HETATM 26 N NAA 2XB . . . L 3 125.396 -22.799 290.53 1 80 ? NAA 2XB 601 D 1 
HETATM 27 N NAP 2XB . . . L 3 126.966 -21.128 289.918 1 74.53 ? NAP 2XB 601 D 1 
HETATM 28 C CBB 2XB . . . L 3 127.468 -19.888 290.285 1 80.31 ? CBB 2XB 601 D 1 
HETATM 29 N NAR 2XB . . . L 3 128.451 -19.199 289.618 1 81.46 ? NAR 2XB 601 D 1 
HETATM 30 C CAL 2XB . . . L 3 128.688 -18.004 290.272 1 81.97 ? CAL 2XB 601 D 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    79 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           30 
#