data_6OKG
#
_model_server_result.job_id            MOObQ2xtJqPeCu0eGwUWxA 
_model_server_result.datetime_utc      '2024-11-26 23:41:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6okg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6OKG 
#
_exptl.entry_id    6OKG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OKG 
_cell.length_a            86.89 
_cell.length_b            86.89 
_cell.length_c            113.729 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OKG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -56.8645 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 164 A CYS 163 1_555 D C3 MU4 . A MU4 502 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.847 ? 
covale ? covale2 A SG CYS 164 A CYS 163 1_555 D C3 MU4 . A MU4 502 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.852 ? 
covale ? covale3 D P24 MU4 . A MU4 502 1_555 B OG SER 37 B SER 36 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.603 ? 
covale ? covale4 D P24 MU4 . A MU4 502 1_555 B OG SER 37 B SER 36 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.603 ? 
metalc ? metalc1 A O ASN 302 A ASN 301 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc2 A OD1 ASN 302 A ASN 301 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? 
metalc ? metalc3 A O ALA 303 A ALA 302 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
metalc ? metalc4 A OE1 GLU 350 A GLU 349 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? 
metalc ? metalc5 A O ASN 397 A ASN 396 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6OKG 
_atom_sites.fract_transf_matrix[1][1]    0.011509 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011509 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008793 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NA A 1 501 1 NA NA . 
D 4 MU4 A 1 502 1 MU4 PNS . 
E 5 HOH A 1 601 84 HOH HOH . 
E 5 HOH A 2 602 70 HOH HOH . 
E 5 HOH A 3 603 5 HOH HOH . 
E 5 HOH A 4 604 17 HOH HOH . 
E 5 HOH A 5 605 45 HOH HOH . 
E 5 HOH A 6 606 9 HOH HOH . 
E 5 HOH A 7 607 29 HOH HOH . 
E 5 HOH A 8 608 47 HOH HOH . 
E 5 HOH A 9 609 40 HOH HOH . 
E 5 HOH A 10 610 54 HOH HOH . 
E 5 HOH A 11 611 3 HOH HOH . 
E 5 HOH A 12 612 10 HOH HOH . 
E 5 HOH A 13 613 12 HOH HOH . 
E 5 HOH A 14 614 89 HOH HOH . 
E 5 HOH A 15 615 74 HOH HOH . 
E 5 HOH A 16 616 66 HOH HOH . 
E 5 HOH A 17 617 65 HOH HOH . 
E 5 HOH A 18 618 4 HOH HOH . 
E 5 HOH A 19 619 48 HOH HOH . 
E 5 HOH A 20 620 36 HOH HOH . 
E 5 HOH A 21 621 2 HOH HOH . 
E 5 HOH A 22 622 96 HOH HOH . 
E 5 HOH A 23 623 11 HOH HOH . 
E 5 HOH A 24 624 108 HOH HOH . 
E 5 HOH A 25 625 14 HOH HOH . 
E 5 HOH A 26 626 56 HOH HOH . 
E 5 HOH A 27 627 98 HOH HOH . 
E 5 HOH A 28 628 31 HOH HOH . 
E 5 HOH A 29 629 154 HOH HOH . 
E 5 HOH A 30 630 77 HOH HOH . 
E 5 HOH A 31 631 99 HOH HOH . 
E 5 HOH A 32 632 35 HOH HOH . 
E 5 HOH A 33 633 44 HOH HOH . 
E 5 HOH A 34 634 46 HOH HOH . 
E 5 HOH A 35 635 13 HOH HOH . 
E 5 HOH A 36 636 1 HOH HOH . 
E 5 HOH A 37 637 8 HOH HOH . 
E 5 HOH A 38 638 49 HOH HOH . 
E 5 HOH A 39 639 6 HOH HOH . 
E 5 HOH A 40 640 132 HOH HOH . 
E 5 HOH A 41 641 28 HOH HOH . 
E 5 HOH A 42 642 130 HOH HOH . 
E 5 HOH A 43 643 82 HOH HOH . 
E 5 HOH A 44 644 43 HOH HOH . 
E 5 HOH A 45 645 27 HOH HOH . 
E 5 HOH A 46 646 149 HOH HOH . 
E 5 HOH A 47 647 121 HOH HOH . 
E 5 HOH A 48 648 102 HOH HOH . 
E 5 HOH A 49 649 24 HOH HOH . 
E 5 HOH A 50 650 61 HOH HOH . 
E 5 HOH A 51 651 50 HOH HOH . 
E 5 HOH A 52 652 126 HOH HOH . 
E 5 HOH A 53 653 147 HOH HOH . 
E 5 HOH A 54 654 85 HOH HOH . 
E 5 HOH A 55 655 124 HOH HOH . 
E 5 HOH A 56 656 83 HOH HOH . 
E 5 HOH A 57 657 141 HOH HOH . 
E 5 HOH A 58 658 76 HOH HOH . 
E 5 HOH A 59 659 143 HOH HOH . 
E 5 HOH A 60 660 32 HOH HOH . 
E 5 HOH A 61 661 57 HOH HOH . 
E 5 HOH A 62 662 103 HOH HOH . 
E 5 HOH A 63 663 55 HOH HOH . 
E 5 HOH A 64 664 25 HOH HOH . 
E 5 HOH A 65 665 95 HOH HOH . 
E 5 HOH A 66 666 41 HOH HOH . 
E 5 HOH A 67 667 33 HOH HOH . 
E 5 HOH A 68 668 148 HOH HOH . 
E 5 HOH A 69 669 63 HOH HOH . 
E 5 HOH A 70 670 52 HOH HOH . 
E 5 HOH A 71 671 42 HOH HOH . 
E 5 HOH A 72 672 78 HOH HOH . 
E 5 HOH A 73 673 80 HOH HOH . 
E 5 HOH A 74 674 92 HOH HOH . 
E 5 HOH A 75 675 38 HOH HOH . 
E 5 HOH A 76 676 23 HOH HOH . 
E 5 HOH A 77 677 90 HOH HOH . 
E 5 HOH A 78 678 67 HOH HOH . 
E 5 HOH A 79 679 15 HOH HOH . 
E 5 HOH A 80 680 111 HOH HOH . 
E 5 HOH A 81 681 20 HOH HOH . 
E 5 HOH A 82 682 162 HOH HOH . 
E 5 HOH A 83 683 160 HOH HOH . 
E 5 HOH A 84 684 134 HOH HOH . 
E 5 HOH A 85 685 30 HOH HOH . 
E 5 HOH A 86 686 75 HOH HOH . 
E 5 HOH A 87 687 106 HOH HOH . 
E 5 HOH A 88 688 39 HOH HOH . 
E 5 HOH A 89 689 166 HOH HOH . 
E 5 HOH A 90 690 37 HOH HOH . 
E 5 HOH A 91 691 62 HOH HOH . 
E 5 HOH A 92 692 179 HOH HOH . 
E 5 HOH A 93 693 117 HOH HOH . 
E 5 HOH A 94 694 7 HOH HOH . 
E 5 HOH A 95 695 140 HOH HOH . 
E 5 HOH A 96 696 97 HOH HOH . 
E 5 HOH A 97 697 22 HOH HOH . 
E 5 HOH A 98 698 94 HOH HOH . 
E 5 HOH A 99 699 128 HOH HOH . 
E 5 HOH A 100 700 18 HOH HOH . 
E 5 HOH A 101 701 144 HOH HOH . 
E 5 HOH A 102 702 151 HOH HOH . 
E 5 HOH A 103 703 73 HOH HOH . 
E 5 HOH A 104 704 81 HOH HOH . 
E 5 HOH A 105 705 131 HOH HOH . 
E 5 HOH A 106 706 150 HOH HOH . 
E 5 HOH A 107 707 122 HOH HOH . 
E 5 HOH A 108 708 129 HOH HOH . 
E 5 HOH A 109 709 123 HOH HOH . 
E 5 HOH A 110 710 157 HOH HOH . 
E 5 HOH A 111 711 133 HOH HOH . 
E 5 HOH A 112 712 71 HOH HOH . 
E 5 HOH A 113 713 127 HOH HOH . 
E 5 HOH A 114 714 158 HOH HOH . 
E 5 HOH A 115 715 177 HOH HOH . 
E 5 HOH A 116 716 93 HOH HOH . 
E 5 HOH A 117 717 86 HOH HOH . 
E 5 HOH A 118 718 168 HOH HOH . 
E 5 HOH A 119 719 153 HOH HOH . 
E 5 HOH A 120 720 119 HOH HOH . 
E 5 HOH A 121 721 21 HOH HOH . 
E 5 HOH A 122 722 161 HOH HOH . 
E 5 HOH A 123 723 184 HOH HOH . 
E 5 HOH A 124 724 34 HOH HOH . 
E 5 HOH A 125 725 188 HOH HOH . 
E 5 HOH A 126 726 88 HOH HOH . 
E 5 HOH A 127 727 19 HOH HOH . 
E 5 HOH A 128 728 175 HOH HOH . 
E 5 HOH A 129 729 159 HOH HOH . 
E 5 HOH A 130 730 53 HOH HOH . 
E 5 HOH A 131 731 139 HOH HOH . 
E 5 HOH A 132 732 118 HOH HOH . 
E 5 HOH A 133 733 101 HOH HOH . 
E 5 HOH A 134 734 185 HOH HOH . 
E 5 HOH A 135 735 51 HOH HOH . 
E 5 HOH A 136 736 100 HOH HOH . 
E 5 HOH A 137 737 138 HOH HOH . 
E 5 HOH A 138 738 110 HOH HOH . 
E 5 HOH A 139 739 146 HOH HOH . 
E 5 HOH A 140 740 174 HOH HOH . 
E 5 HOH A 141 741 180 HOH HOH . 
E 5 HOH A 142 742 156 HOH HOH . 
E 5 HOH A 143 743 189 HOH HOH . 
E 5 HOH A 144 744 169 HOH HOH . 
E 5 HOH A 145 745 181 HOH HOH . 
E 5 HOH A 146 746 104 HOH HOH . 
E 5 HOH A 147 747 186 HOH HOH . 
E 5 HOH A 148 748 173 HOH HOH . 
E 5 HOH A 149 749 87 HOH HOH . 
E 5 HOH A 150 750 145 HOH HOH . 
E 5 HOH A 151 751 125 HOH HOH . 
E 5 HOH A 152 752 165 HOH HOH . 
E 5 HOH A 153 753 178 HOH HOH . 
E 5 HOH A 154 754 114 HOH HOH . 
E 5 HOH A 155 755 109 HOH HOH . 
E 5 HOH A 156 756 16 HOH HOH . 
E 5 HOH A 157 757 113 HOH HOH . 
E 5 HOH A 158 758 171 HOH HOH . 
E 5 HOH A 159 759 163 HOH HOH . 
E 5 HOH A 160 760 59 HOH HOH . 
E 5 HOH A 161 761 112 HOH HOH . 
E 5 HOH A 162 762 176 HOH HOH . 
E 5 HOH A 163 763 142 HOH HOH . 
E 5 HOH A 164 764 164 HOH HOH . 
E 5 HOH A 165 765 172 HOH HOH . 
E 5 HOH A 166 766 72 HOH HOH . 
E 5 HOH A 167 767 107 HOH HOH . 
E 5 HOH A 168 768 105 HOH HOH . 
E 5 HOH A 169 769 120 HOH HOH . 
E 5 HOH A 170 770 187 HOH HOH . 
E 5 HOH A 171 771 182 HOH HOH . 
E 5 HOH A 172 772 167 HOH HOH . 
F 5 HOH B 1 201 135 HOH HOH . 
F 5 HOH B 2 202 64 HOH HOH . 
F 5 HOH B 3 203 68 HOH HOH . 
F 5 HOH B 4 204 91 HOH HOH . 
F 5 HOH B 5 205 26 HOH HOH . 
F 5 HOH B 6 206 79 HOH HOH . 
F 5 HOH B 7 207 69 HOH HOH . 
F 5 HOH B 8 208 60 HOH HOH . 
F 5 HOH B 9 209 183 HOH HOH . 
F 5 HOH B 10 210 116 HOH HOH . 
F 5 HOH B 11 211 155 HOH HOH . 
F 5 HOH B 12 212 136 HOH HOH . 
F 5 HOH B 13 213 170 HOH HOH . 
F 5 HOH B 14 214 115 HOH HOH . 
F 5 HOH B 15 215 152 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -5.633 
_atom_site.Cartn_y               -18.647 
_atom_site.Cartn_z               -20.055 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.77 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#