data_6OL9 # _model_server_result.job_id cZ5yMoxCEwYKjcV8dn0Kag _model_server_result.datetime_utc '2025-07-30 19:04:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ol9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1205}' # _entry.id 6OL9 # _exptl.entry_id 6OL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.11 _cell.angle_gamma 90 _cell.entry_id 6OL9 _cell.length_a 97.06 _cell.length_b 63.31 _cell.length_c 91.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 85 A CYS 103 1_555 A SG CYS 165 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 404 A CYS 468 1_555 A SG CYS 407 A CYS 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 342 n n C10 C9 OLC doub 343 n n C10 C11 OLC sing 344 n n C9 C8 OLC sing 345 n n C17 C16 OLC sing 346 z n C11 C12 OLC sing 347 n n C8 C7 OLC sing 348 n n C24 C22 OLC sing 349 n n C24 O25 OLC sing 350 n n C16 C15 OLC sing 351 n n C12 C13 OLC sing 352 n n C7 C6 OLC sing 353 n n C15 C14 OLC sing 354 n n C13 C14 OLC sing 355 n n C6 C5 OLC sing 356 n n C5 C4 OLC sing 357 n n C4 C3 OLC sing 358 n n C3 C2 OLC sing 359 n n C2 C1 OLC sing 360 n n C21 C22 OLC sing 361 n n C21 O20 OLC sing 362 n n C1 O19 OLC doub 363 n n C1 O20 OLC sing 364 n n C22 O23 OLC sing 365 n n C18 H18 OLC sing 366 n n C18 H18A OLC sing 367 n n C18 H18B OLC sing 368 n n C10 H10 OLC sing 369 n n C9 H9 OLC sing 370 n n C17 H17 OLC sing 371 n n C17 H17A OLC sing 372 n n C11 H11 OLC sing 373 n n C11 H11A OLC sing 374 n n C8 H8 OLC sing 375 n n C8 H8A OLC sing 376 n n C24 H24 OLC sing 377 n n C24 H24A OLC sing 378 n n C16 H16 OLC sing 379 n n C16 H16A OLC sing 380 n n C12 H12 OLC sing 381 n n C12 H12A OLC sing 382 n n C7 H7 OLC sing 383 n n C7 H7A OLC sing 384 n n C15 H15 OLC sing 385 n n C15 H15A OLC sing 386 n n C13 H13 OLC sing 387 n n C13 H13A OLC sing 388 n n C6 H6 OLC sing 389 n n C6 H6A OLC sing 390 n n C14 H14 OLC sing 391 n n C14 H14A OLC sing 392 n n C5 H5 OLC sing 393 n n C5 H5A OLC sing 394 n n C4 H4 OLC sing 395 n n C4 H4A OLC sing 396 n n C3 H3 OLC sing 397 n n C3 H3A OLC sing 398 n n C2 H2 OLC sing 399 n n C2 H2A OLC sing 400 n n C21 H21 OLC sing 401 n n C21 H21A OLC sing 402 n n C22 H22 OLC sing 403 n n O25 HO25 OLC sing 404 n n O23 HO23 OLC sing 405 n n # _atom_sites.entry_id 6OL9 _atom_sites.fract_transf_matrix[1][1] 0.010303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00221 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OLA A 1 1201 2 OLA OLA . C 2 OLA A 1 1202 3 OLA OLA . D 3 0HK A 1 1203 1201 0HK 0HK . E 4 P33 A 1 1204 1 P33 P33 . F 5 OLC A 1 1205 1 OLC OLC . G 6 HOH A 1 1301 8 HOH HOH . G 6 HOH A 2 1302 1 HOH HOH . G 6 HOH A 3 1303 6 HOH HOH . G 6 HOH A 4 1304 2 HOH HOH . G 6 HOH A 5 1305 13 HOH HOH . G 6 HOH A 6 1306 12 HOH HOH . G 6 HOH A 7 1307 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . F 5 31.001 8.932 -47.057 1 79.21 ? C18 OLC 1205 A 1 HETATM 2 C C10 OLC . . . F 5 31.277 7.219 -54.822 1 81.27 ? C10 OLC 1205 A 1 HETATM 3 C C9 OLC . . . F 5 31.677 7.855 -55.935 1 84.48 ? C9 OLC 1205 A 1 HETATM 4 C C17 OLC . . . F 5 32.317 8.406 -47.588 1 75.04 ? C17 OLC 1205 A 1 HETATM 5 C C11 OLC . . . F 5 32.23 7.084 -53.659 1 78.93 ? C11 OLC 1205 A 1 HETATM 6 C C8 OLC . . . F 5 30.722 7.988 -57.097 1 85.25 ? C8 OLC 1205 A 1 HETATM 7 C C24 OLC . . . F 5 26.283 9.319 -62.758 1 117.99 ? C24 OLC 1205 A 1 HETATM 8 C C16 OLC . . . F 5 32.13 7.874 -48.989 1 71.86 ? C16 OLC 1205 A 1 HETATM 9 C C12 OLC . . . F 5 31.43 6.74 -52.424 1 77.55 ? C12 OLC 1205 A 1 HETATM 10 C C7 OLC . . . F 5 31.33 8.911 -58.124 1 83.5 ? C7 OLC 1205 A 1 HETATM 11 C C15 OLC . . . F 5 33.435 7.282 -49.474 1 73.74 ? C15 OLC 1205 A 1 HETATM 12 C C13 OLC . . . F 5 32.344 6.137 -51.38 1 78.54 ? C13 OLC 1205 A 1 HETATM 13 C C6 OLC . . . F 5 31.332 8.201 -59.453 1 85.1 ? C6 OLC 1205 A 1 HETATM 14 C C14 OLC . . . F 5 33.402 7.143 -50.981 1 75.72 ? C14 OLC 1205 A 1 HETATM 15 C C5 OLC . . . F 5 30.215 8.747 -60.316 1 87.52 ? C5 OLC 1205 A 1 HETATM 16 C C4 OLC . . . F 5 30.625 10.111 -60.825 1 93 ? C4 OLC 1205 A 1 HETATM 17 C C3 OLC . . . F 5 30.624 10.207 -62.34 1 95.65 ? C3 OLC 1205 A 1 HETATM 18 C C2 OLC . . . F 5 31.055 8.929 -63.029 1 97.5 ? C2 OLC 1205 A 1 HETATM 19 C C21 OLC . . . F 5 27.674 8.428 -64.624 1 114.69 ? C21 OLC 1205 A 1 HETATM 20 C C1 OLC . . . F 5 29.965 8.533 -63.998 1 102.55 ? C1 OLC 1205 A 1 HETATM 21 C C22 OLC . . . F 5 26.267 8.584 -64.082 1 118.02 ? C22 OLC 1205 A 1 HETATM 22 O O19 OLC . . . F 5 30.249 8.13 -65.108 1 101.16 ? O19 OLC 1205 A 1 HETATM 23 O O25 OLC . . . F 5 25.099 9.039 -62.046 1 116.87 ? O25 OLC 1205 A 1 HETATM 24 O O23 OLC . . . F 5 25.491 9.31 -65.007 1 119.7 ? O23 OLC 1205 A 1 HETATM 25 O O20 OLC . . . F 5 28.62 8.641 -63.6 1 110.31 ? O20 OLC 1205 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 714 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #