data_6OLV # _model_server_result.job_id NR4smJT8lKd4FspFmwaDfA _model_server_result.datetime_utc '2024-11-25 12:43:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6olv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6OLV # _exptl.entry_id 6OLV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6OLV _cell.length_a 88.519 _cell.length_b 88.519 _cell.length_c 103.87 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OLV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 6OLV _atom_sites.fract_transf_matrix[1][1] 0.011297 _atom_sites.fract_transf_matrix[1][2] 0.006522 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013045 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 1 GOL GOL . C 2 GOL A 1 302 2 GOL GOL . D 2 GOL A 1 303 3 GOL GOL . E 3 ACT A 1 304 3 ACT ACT . F 4 HOH A 1 401 179 HOH HOH . F 4 HOH A 2 402 158 HOH HOH . F 4 HOH A 3 403 95 HOH HOH . F 4 HOH A 4 404 119 HOH HOH . F 4 HOH A 5 405 100 HOH HOH . F 4 HOH A 6 406 64 HOH HOH . F 4 HOH A 7 407 216 HOH HOH . F 4 HOH A 8 408 3 HOH HOH . F 4 HOH A 9 409 197 HOH HOH . F 4 HOH A 10 410 108 HOH HOH . F 4 HOH A 11 411 18 HOH HOH . F 4 HOH A 12 412 194 HOH HOH . F 4 HOH A 13 413 41 HOH HOH . F 4 HOH A 14 414 50 HOH HOH . F 4 HOH A 15 415 177 HOH HOH . F 4 HOH A 16 416 9 HOH HOH . F 4 HOH A 17 417 150 HOH HOH . F 4 HOH A 18 418 38 HOH HOH . F 4 HOH A 19 419 43 HOH HOH . F 4 HOH A 20 420 213 HOH HOH . F 4 HOH A 21 421 230 HOH HOH . F 4 HOH A 22 422 80 HOH HOH . F 4 HOH A 23 423 229 HOH HOH . F 4 HOH A 24 424 172 HOH HOH . F 4 HOH A 25 425 60 HOH HOH . F 4 HOH A 26 426 189 HOH HOH . F 4 HOH A 27 427 171 HOH HOH . F 4 HOH A 28 428 36 HOH HOH . F 4 HOH A 29 429 142 HOH HOH . F 4 HOH A 30 430 15 HOH HOH . F 4 HOH A 31 431 86 HOH HOH . F 4 HOH A 32 432 81 HOH HOH . F 4 HOH A 33 433 5 HOH HOH . F 4 HOH A 34 434 200 HOH HOH . F 4 HOH A 35 435 180 HOH HOH . F 4 HOH A 36 436 25 HOH HOH . F 4 HOH A 37 437 45 HOH HOH . F 4 HOH A 38 438 71 HOH HOH . F 4 HOH A 39 439 175 HOH HOH . F 4 HOH A 40 440 14 HOH HOH . F 4 HOH A 41 441 132 HOH HOH . F 4 HOH A 42 442 106 HOH HOH . F 4 HOH A 43 443 23 HOH HOH . F 4 HOH A 44 444 181 HOH HOH . F 4 HOH A 45 445 54 HOH HOH . F 4 HOH A 46 446 199 HOH HOH . F 4 HOH A 47 447 72 HOH HOH . F 4 HOH A 48 448 51 HOH HOH . F 4 HOH A 49 449 55 HOH HOH . F 4 HOH A 50 450 75 HOH HOH . F 4 HOH A 51 451 17 HOH HOH . F 4 HOH A 52 452 103 HOH HOH . F 4 HOH A 53 453 8 HOH HOH . F 4 HOH A 54 454 66 HOH HOH . F 4 HOH A 55 455 110 HOH HOH . F 4 HOH A 56 456 204 HOH HOH . F 4 HOH A 57 457 186 HOH HOH . F 4 HOH A 58 458 122 HOH HOH . F 4 HOH A 59 459 24 HOH HOH . F 4 HOH A 60 460 68 HOH HOH . F 4 HOH A 61 461 16 HOH HOH . F 4 HOH A 62 462 21 HOH HOH . F 4 HOH A 63 463 221 HOH HOH . F 4 HOH A 64 464 28 HOH HOH . F 4 HOH A 65 465 56 HOH HOH . F 4 HOH A 66 466 19 HOH HOH . F 4 HOH A 67 467 205 HOH HOH . F 4 HOH A 68 468 88 HOH HOH . F 4 HOH A 69 469 7 HOH HOH . F 4 HOH A 70 470 153 HOH HOH . F 4 HOH A 71 471 37 HOH HOH . F 4 HOH A 72 472 137 HOH HOH . F 4 HOH A 73 473 27 HOH HOH . F 4 HOH A 74 474 124 HOH HOH . F 4 HOH A 75 475 35 HOH HOH . F 4 HOH A 76 476 32 HOH HOH . F 4 HOH A 77 477 42 HOH HOH . F 4 HOH A 78 478 83 HOH HOH . F 4 HOH A 79 479 136 HOH HOH . F 4 HOH A 80 480 65 HOH HOH . F 4 HOH A 81 481 4 HOH HOH . F 4 HOH A 82 482 12 HOH HOH . F 4 HOH A 83 483 90 HOH HOH . F 4 HOH A 84 484 69 HOH HOH . F 4 HOH A 85 485 196 HOH HOH . F 4 HOH A 86 486 44 HOH HOH . F 4 HOH A 87 487 159 HOH HOH . F 4 HOH A 88 488 74 HOH HOH . F 4 HOH A 89 489 49 HOH HOH . F 4 HOH A 90 490 190 HOH HOH . F 4 HOH A 91 491 62 HOH HOH . F 4 HOH A 92 492 135 HOH HOH . F 4 HOH A 93 493 39 HOH HOH . F 4 HOH A 94 494 70 HOH HOH . F 4 HOH A 95 495 125 HOH HOH . F 4 HOH A 96 496 53 HOH HOH . F 4 HOH A 97 497 2 HOH HOH . F 4 HOH A 98 498 149 HOH HOH . F 4 HOH A 99 499 133 HOH HOH . F 4 HOH A 100 500 127 HOH HOH . F 4 HOH A 101 501 212 HOH HOH . F 4 HOH A 102 502 58 HOH HOH . F 4 HOH A 103 503 10 HOH HOH . F 4 HOH A 104 504 174 HOH HOH . F 4 HOH A 105 505 139 HOH HOH . F 4 HOH A 106 506 46 HOH HOH . F 4 HOH A 107 507 34 HOH HOH . F 4 HOH A 108 508 1 HOH HOH . F 4 HOH A 109 509 67 HOH HOH . F 4 HOH A 110 510 223 HOH HOH . F 4 HOH A 111 511 167 HOH HOH . F 4 HOH A 112 512 22 HOH HOH . F 4 HOH A 113 513 73 HOH HOH . F 4 HOH A 114 514 29 HOH HOH . F 4 HOH A 115 515 13 HOH HOH . F 4 HOH A 116 516 20 HOH HOH . F 4 HOH A 117 517 40 HOH HOH . F 4 HOH A 118 518 166 HOH HOH . F 4 HOH A 119 519 59 HOH HOH . F 4 HOH A 120 520 31 HOH HOH . F 4 HOH A 121 521 176 HOH HOH . F 4 HOH A 122 522 48 HOH HOH . F 4 HOH A 123 523 129 HOH HOH . F 4 HOH A 124 524 219 HOH HOH . F 4 HOH A 125 525 126 HOH HOH . F 4 HOH A 126 526 160 HOH HOH . F 4 HOH A 127 527 93 HOH HOH . F 4 HOH A 128 528 145 HOH HOH . F 4 HOH A 129 529 169 HOH HOH . F 4 HOH A 130 530 225 HOH HOH . F 4 HOH A 131 531 77 HOH HOH . F 4 HOH A 132 532 138 HOH HOH . F 4 HOH A 133 533 115 HOH HOH . F 4 HOH A 134 534 78 HOH HOH . F 4 HOH A 135 535 99 HOH HOH . F 4 HOH A 136 536 63 HOH HOH . F 4 HOH A 137 537 107 HOH HOH . F 4 HOH A 138 538 11 HOH HOH . F 4 HOH A 139 539 30 HOH HOH . F 4 HOH A 140 540 104 HOH HOH . F 4 HOH A 141 541 154 HOH HOH . F 4 HOH A 142 542 134 HOH HOH . F 4 HOH A 143 543 141 HOH HOH . F 4 HOH A 144 544 207 HOH HOH . F 4 HOH A 145 545 128 HOH HOH . F 4 HOH A 146 546 105 HOH HOH . F 4 HOH A 147 547 6 HOH HOH . F 4 HOH A 148 548 165 HOH HOH . F 4 HOH A 149 549 203 HOH HOH . F 4 HOH A 150 550 52 HOH HOH . F 4 HOH A 151 551 114 HOH HOH . F 4 HOH A 152 552 228 HOH HOH . F 4 HOH A 153 553 151 HOH HOH . F 4 HOH A 154 554 112 HOH HOH . F 4 HOH A 155 555 173 HOH HOH . F 4 HOH A 156 556 220 HOH HOH . F 4 HOH A 157 557 111 HOH HOH . F 4 HOH A 158 558 26 HOH HOH . F 4 HOH A 159 559 146 HOH HOH . F 4 HOH A 160 560 61 HOH HOH . F 4 HOH A 161 561 140 HOH HOH . F 4 HOH A 162 562 222 HOH HOH . F 4 HOH A 163 563 202 HOH HOH . F 4 HOH A 164 564 47 HOH HOH . F 4 HOH A 165 565 211 HOH HOH . F 4 HOH A 166 566 187 HOH HOH . F 4 HOH A 167 567 57 HOH HOH . F 4 HOH A 168 568 87 HOH HOH . F 4 HOH A 169 569 168 HOH HOH . F 4 HOH A 170 570 84 HOH HOH . F 4 HOH A 171 571 226 HOH HOH . F 4 HOH A 172 572 161 HOH HOH . F 4 HOH A 173 573 155 HOH HOH . F 4 HOH A 174 574 89 HOH HOH . F 4 HOH A 175 575 164 HOH HOH . F 4 HOH A 176 576 195 HOH HOH . F 4 HOH A 177 577 218 HOH HOH . F 4 HOH A 178 578 198 HOH HOH . F 4 HOH A 179 579 117 HOH HOH . F 4 HOH A 180 580 33 HOH HOH . F 4 HOH A 181 581 208 HOH HOH . F 4 HOH A 182 582 185 HOH HOH . F 4 HOH A 183 583 162 HOH HOH . F 4 HOH A 184 584 121 HOH HOH . F 4 HOH A 185 585 191 HOH HOH . F 4 HOH A 186 586 85 HOH HOH . F 4 HOH A 187 587 227 HOH HOH . F 4 HOH A 188 588 123 HOH HOH . F 4 HOH A 189 589 182 HOH HOH . F 4 HOH A 190 590 130 HOH HOH . F 4 HOH A 191 591 116 HOH HOH . F 4 HOH A 192 592 131 HOH HOH . F 4 HOH A 193 593 101 HOH HOH . F 4 HOH A 194 594 148 HOH HOH . F 4 HOH A 195 595 188 HOH HOH . F 4 HOH A 196 596 184 HOH HOH . F 4 HOH A 197 597 109 HOH HOH . F 4 HOH A 198 598 91 HOH HOH . F 4 HOH A 199 599 157 HOH HOH . F 4 HOH A 200 600 143 HOH HOH . F 4 HOH A 201 601 224 HOH HOH . F 4 HOH A 202 602 215 HOH HOH . F 4 HOH A 203 603 102 HOH HOH . F 4 HOH A 204 604 144 HOH HOH . F 4 HOH A 205 605 92 HOH HOH . F 4 HOH A 206 606 193 HOH HOH . F 4 HOH A 207 607 147 HOH HOH . F 4 HOH A 208 608 206 HOH HOH . F 4 HOH A 209 609 183 HOH HOH . F 4 HOH A 210 610 210 HOH HOH . F 4 HOH A 211 611 79 HOH HOH . F 4 HOH A 212 612 82 HOH HOH . F 4 HOH A 213 613 163 HOH HOH . F 4 HOH A 214 614 152 HOH HOH . F 4 HOH A 215 615 118 HOH HOH . F 4 HOH A 216 616 76 HOH HOH . F 4 HOH A 217 617 96 HOH HOH . F 4 HOH A 218 618 120 HOH HOH . F 4 HOH A 219 619 94 HOH HOH . F 4 HOH A 220 620 97 HOH HOH . F 4 HOH A 221 621 217 HOH HOH . F 4 HOH A 222 622 113 HOH HOH . F 4 HOH A 223 623 178 HOH HOH . F 4 HOH A 224 624 156 HOH HOH . F 4 HOH A 225 625 170 HOH HOH . F 4 HOH A 226 626 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 61.899 -19.073 109.272 1 51.69 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . B 2 61.556 -18.865 107.919 1 47.38 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . B 2 63.284 -18.409 109.513 1 59.17 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . B 2 63.374 -17.188 108.86 1 58.7 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . B 2 63.431 -18.294 111.078 1 54.18 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . B 2 64.704 -17.78 111.375 1 53.64 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #