data_6OMM # _model_server_result.job_id vaWpYOy4PFAU4ThWCpJw8Q _model_server_result.datetime_utc '2024-10-11 00:27:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6omm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":404}' # _entry.id 6OMM # _exptl.entry_id 6OMM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OMM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 119 R CYS 98 1_555 A SG CYS 197 R CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 F SG CYS 21 E CYS 22 1_555 F SG CYS 95 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 F SG CYS 159 E CYS 159 1_555 F SG CYS 229 E CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 B C VAL 5 L VAL 8 1_555 B N QXV 6 L QXV 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OMM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR R 1 401 610 CLR CLR . H 7 CLR R 1 402 611 CLR CLR . I 7 CLR R 1 403 612 CLR CLR . J 7 CLR R 1 404 613 CLR CLR . K 7 CLR R 1 405 614 CLR CLR . L 8 PLM R 1 406 616 PLM PLM . M 8 PLM R 1 407 617 PLM PLM . N 8 PLM R 1 408 618 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . J 7 114.62 109.753 110.133 1 71.53 ? C1 CLR 404 R 1 HETATM 2 C C2 CLR . . . J 7 113.507 110.117 109.147 1 71.07 ? C2 CLR 404 R 1 HETATM 3 C C3 CLR . . . J 7 112.148 109.98 109.831 1 71.37 ? C3 CLR 404 R 1 HETATM 4 C C4 CLR . . . J 7 112.061 111.036 110.935 1 71.61 ? C4 CLR 404 R 1 HETATM 5 C C5 CLR . . . J 7 113.224 110.838 111.895 1 72.27 ? C5 CLR 404 R 1 HETATM 6 C C6 CLR . . . J 7 112.958 110.798 113.169 1 71.39 ? C6 CLR 404 R 1 HETATM 7 C C7 CLR . . . J 7 113.999 110.61 114.235 1 71.54 ? C7 CLR 404 R 1 HETATM 8 C C8 CLR . . . J 7 115.395 110.957 113.705 1 72.29 ? C8 CLR 404 R 1 HETATM 9 C C9 CLR . . . J 7 115.613 110.211 112.381 1 72.16 ? C9 CLR 404 R 1 HETATM 10 C C10 CLR . . . J 7 114.612 110.7 111.34 1 72.34 ? C10 CLR 404 R 1 HETATM 11 C C11 CLR . . . J 7 117.058 110.325 111.882 1 71.23 ? C11 CLR 404 R 1 HETATM 12 C C12 CLR . . . J 7 118.097 109.981 112.964 1 70.77 ? C12 CLR 404 R 1 HETATM 13 C C13 CLR . . . J 7 117.867 110.784 114.25 1 72 ? C13 CLR 404 R 1 HETATM 14 C C14 CLR . . . J 7 116.415 110.465 114.723 1 72.28 ? C14 CLR 404 R 1 HETATM 15 C C15 CLR . . . J 7 116.365 111.13 116.104 1 71.42 ? C15 CLR 404 R 1 HETATM 16 C C16 CLR . . . J 7 117.746 110.744 116.697 1 70.89 ? C16 CLR 404 R 1 HETATM 17 C C17 CLR . . . J 7 118.678 110.39 115.498 1 71.4 ? C17 CLR 404 R 1 HETATM 18 C C18 CLR . . . J 7 117.993 112.292 113.973 1 70.9 ? C18 CLR 404 R 1 HETATM 19 C C19 CLR . . . J 7 115.038 112.099 110.872 1 71.37 ? C19 CLR 404 R 1 HETATM 20 C C20 CLR . . . J 7 120.074 111.058 115.581 1 71.22 ? C20 CLR 404 R 1 HETATM 21 C C21 CLR . . . J 7 121.135 110.095 115.036 1 70.37 ? C21 CLR 404 R 1 HETATM 22 C C22 CLR . . . J 7 120.475 111.444 117.014 1 71.35 ? C22 CLR 404 R 1 HETATM 23 C C23 CLR . . . J 7 121.842 112.132 117.036 1 71.37 ? C23 CLR 404 R 1 HETATM 24 C C24 CLR . . . J 7 122.217 112.459 118.484 1 71.66 ? C24 CLR 404 R 1 HETATM 25 C C25 CLR . . . J 7 123.611 113.09 118.556 1 73.24 ? C25 CLR 404 R 1 HETATM 26 C C26 CLR . . . J 7 124.658 112.122 118.003 1 72.25 ? C26 CLR 404 R 1 HETATM 27 C C27 CLR . . . J 7 123.642 114.396 117.759 1 73.86 ? C27 CLR 404 R 1 HETATM 28 O O1 CLR . . . J 7 111.108 110.201 108.876 1 70.61 ? O1 CLR 404 R 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #