data_6OMZ # _model_server_result.job_id roUzybJTzlddoYMJkuHVtw _model_server_result.datetime_utc '2024-11-26 08:57:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6omz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 6OMZ # _exptl.entry_id 6OMZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OMZ _cell.length_a 47.72 _cell.length_b 96.41 _cell.length_c 135.07 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OMZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 99 n n C1 C2 EDO sing 100 n n C1 H11 EDO sing 101 n n C1 H12 EDO sing 102 n n O1 HO1 EDO sing 103 n n C2 O2 EDO sing 104 n n C2 H21 EDO sing 105 n n C2 H22 EDO sing 106 n n O2 HO2 EDO sing 107 n n # _atom_sites.entry_id 6OMZ _atom_sites.fract_transf_matrix[1][1] 0.020956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 301 301 CIT CIT . C 3 DMS A 1 302 401 DMS DMS . D 4 PMM A 1 303 501 PMM PMM . E 2 CIT A 1 304 801 CIT CIT . F 5 EDO A 1 305 1301 EDO EDO . G 5 EDO A 1 306 1401 EDO EDO . H 5 EDO A 1 307 1501 EDO EDO . I 5 EDO A 1 308 1601 EDO EDO . J 5 EDO A 1 309 1701 EDO EDO . K 5 EDO A 1 310 1801 EDO EDO . L 5 EDO A 1 311 1901 EDO EDO . M 5 EDO A 1 312 2001 EDO EDO . N 6 HOH A 1 401 358 HOH HOH . N 6 HOH A 2 402 242 HOH HOH . N 6 HOH A 3 403 391 HOH HOH . N 6 HOH A 4 404 359 HOH HOH . N 6 HOH A 5 405 195 HOH HOH . N 6 HOH A 6 406 27 HOH HOH . N 6 HOH A 7 407 197 HOH HOH . N 6 HOH A 8 408 144 HOH HOH . N 6 HOH A 9 409 218 HOH HOH . N 6 HOH A 10 410 184 HOH HOH . N 6 HOH A 11 411 189 HOH HOH . N 6 HOH A 12 412 113 HOH HOH . N 6 HOH A 13 413 187 HOH HOH . N 6 HOH A 14 414 200 HOH HOH . N 6 HOH A 15 415 260 HOH HOH . N 6 HOH A 16 416 89 HOH HOH . N 6 HOH A 17 417 283 HOH HOH . N 6 HOH A 18 418 91 HOH HOH . N 6 HOH A 19 419 122 HOH HOH . N 6 HOH A 20 420 35 HOH HOH . N 6 HOH A 21 421 73 HOH HOH . N 6 HOH A 22 422 59 HOH HOH . N 6 HOH A 23 423 142 HOH HOH . N 6 HOH A 24 424 11 HOH HOH . N 6 HOH A 25 425 39 HOH HOH . N 6 HOH A 26 426 134 HOH HOH . N 6 HOH A 27 427 31 HOH HOH . N 6 HOH A 28 428 33 HOH HOH . N 6 HOH A 29 429 56 HOH HOH . N 6 HOH A 30 430 167 HOH HOH . N 6 HOH A 31 431 16 HOH HOH . N 6 HOH A 32 432 13 HOH HOH . N 6 HOH A 33 433 83 HOH HOH . N 6 HOH A 34 434 78 HOH HOH . N 6 HOH A 35 435 128 HOH HOH . N 6 HOH A 36 436 84 HOH HOH . N 6 HOH A 37 437 286 HOH HOH . N 6 HOH A 38 438 132 HOH HOH . N 6 HOH A 39 439 208 HOH HOH . N 6 HOH A 40 440 24 HOH HOH . N 6 HOH A 41 441 165 HOH HOH . N 6 HOH A 42 442 245 HOH HOH . N 6 HOH A 43 443 34 HOH HOH . N 6 HOH A 44 444 82 HOH HOH . N 6 HOH A 45 445 21 HOH HOH . N 6 HOH A 46 446 58 HOH HOH . N 6 HOH A 47 447 285 HOH HOH . N 6 HOH A 48 448 227 HOH HOH . N 6 HOH A 49 449 348 HOH HOH . N 6 HOH A 50 450 114 HOH HOH . N 6 HOH A 51 451 17 HOH HOH . N 6 HOH A 52 452 318 HOH HOH . N 6 HOH A 53 453 235 HOH HOH . N 6 HOH A 54 454 269 HOH HOH . N 6 HOH A 55 455 159 HOH HOH . N 6 HOH A 56 456 12 HOH HOH . N 6 HOH A 57 457 19 HOH HOH . N 6 HOH A 58 458 325 HOH HOH . N 6 HOH A 59 459 85 HOH HOH . N 6 HOH A 60 460 53 HOH HOH . N 6 HOH A 61 461 43 HOH HOH . N 6 HOH A 62 462 88 HOH HOH . N 6 HOH A 63 463 52 HOH HOH . N 6 HOH A 64 464 129 HOH HOH . N 6 HOH A 65 465 90 HOH HOH . N 6 HOH A 66 466 97 HOH HOH . N 6 HOH A 67 467 79 HOH HOH . N 6 HOH A 68 468 44 HOH HOH . N 6 HOH A 69 469 61 HOH HOH . N 6 HOH A 70 470 2 HOH HOH . N 6 HOH A 71 471 153 HOH HOH . N 6 HOH A 72 472 174 HOH HOH . N 6 HOH A 73 473 105 HOH HOH . N 6 HOH A 74 474 98 HOH HOH . N 6 HOH A 75 475 100 HOH HOH . N 6 HOH A 76 476 400 HOH HOH . N 6 HOH A 77 477 188 HOH HOH . N 6 HOH A 78 478 168 HOH HOH . N 6 HOH A 79 479 70 HOH HOH . N 6 HOH A 80 480 392 HOH HOH . N 6 HOH A 81 481 32 HOH HOH . N 6 HOH A 82 482 109 HOH HOH . N 6 HOH A 83 483 72 HOH HOH . N 6 HOH A 84 484 57 HOH HOH . N 6 HOH A 85 485 69 HOH HOH . N 6 HOH A 86 486 75 HOH HOH . N 6 HOH A 87 487 49 HOH HOH . N 6 HOH A 88 488 185 HOH HOH . N 6 HOH A 89 489 106 HOH HOH . N 6 HOH A 90 490 14 HOH HOH . N 6 HOH A 91 491 47 HOH HOH . N 6 HOH A 92 492 199 HOH HOH . N 6 HOH A 93 493 135 HOH HOH . N 6 HOH A 94 494 169 HOH HOH . N 6 HOH A 95 495 7 HOH HOH . N 6 HOH A 96 496 95 HOH HOH . N 6 HOH A 97 497 38 HOH HOH . N 6 HOH A 98 498 77 HOH HOH . N 6 HOH A 99 499 190 HOH HOH . N 6 HOH A 100 500 93 HOH HOH . N 6 HOH A 101 501 201 HOH HOH . N 6 HOH A 102 502 335 HOH HOH . N 6 HOH A 103 503 171 HOH HOH . N 6 HOH A 104 504 110 HOH HOH . N 6 HOH A 105 505 250 HOH HOH . N 6 HOH A 106 506 158 HOH HOH . N 6 HOH A 107 507 323 HOH HOH . N 6 HOH A 108 508 112 HOH HOH . N 6 HOH A 109 509 207 HOH HOH . N 6 HOH A 110 510 275 HOH HOH . N 6 HOH A 111 511 54 HOH HOH . N 6 HOH A 112 512 119 HOH HOH . N 6 HOH A 113 513 230 HOH HOH . N 6 HOH A 114 514 347 HOH HOH . N 6 HOH A 115 515 385 HOH HOH . N 6 HOH A 116 516 299 HOH HOH . N 6 HOH A 117 517 50 HOH HOH . N 6 HOH A 118 518 107 HOH HOH . N 6 HOH A 119 519 126 HOH HOH . N 6 HOH A 120 520 76 HOH HOH . N 6 HOH A 121 521 99 HOH HOH . N 6 HOH A 122 522 40 HOH HOH . N 6 HOH A 123 523 116 HOH HOH . N 6 HOH A 124 524 62 HOH HOH . N 6 HOH A 125 525 80 HOH HOH . N 6 HOH A 126 526 74 HOH HOH . N 6 HOH A 127 527 121 HOH HOH . N 6 HOH A 128 528 149 HOH HOH . N 6 HOH A 129 529 334 HOH HOH . N 6 HOH A 130 530 48 HOH HOH . N 6 HOH A 131 531 273 HOH HOH . N 6 HOH A 132 532 15 HOH HOH . N 6 HOH A 133 533 211 HOH HOH . N 6 HOH A 134 534 45 HOH HOH . N 6 HOH A 135 535 403 HOH HOH . N 6 HOH A 136 536 374 HOH HOH . N 6 HOH A 137 537 162 HOH HOH . N 6 HOH A 138 538 270 HOH HOH . N 6 HOH A 139 539 108 HOH HOH . N 6 HOH A 140 540 120 HOH HOH . N 6 HOH A 141 541 103 HOH HOH . N 6 HOH A 142 542 238 HOH HOH . N 6 HOH A 143 543 29 HOH HOH . N 6 HOH A 144 544 125 HOH HOH . N 6 HOH A 145 545 136 HOH HOH . N 6 HOH A 146 546 20 HOH HOH . N 6 HOH A 147 547 117 HOH HOH . N 6 HOH A 148 548 228 HOH HOH . N 6 HOH A 149 549 175 HOH HOH . N 6 HOH A 150 550 317 HOH HOH . N 6 HOH A 151 551 143 HOH HOH . N 6 HOH A 152 552 28 HOH HOH . N 6 HOH A 153 553 152 HOH HOH . N 6 HOH A 154 554 60 HOH HOH . N 6 HOH A 155 555 351 HOH HOH . N 6 HOH A 156 556 172 HOH HOH . N 6 HOH A 157 557 9 HOH HOH . N 6 HOH A 158 558 277 HOH HOH . N 6 HOH A 159 559 166 HOH HOH . N 6 HOH A 160 560 307 HOH HOH . N 6 HOH A 161 561 139 HOH HOH . N 6 HOH A 162 562 8 HOH HOH . N 6 HOH A 163 563 305 HOH HOH . N 6 HOH A 164 564 81 HOH HOH . N 6 HOH A 165 565 3 HOH HOH . N 6 HOH A 166 566 67 HOH HOH . N 6 HOH A 167 567 92 HOH HOH . N 6 HOH A 168 568 94 HOH HOH . N 6 HOH A 169 569 140 HOH HOH . N 6 HOH A 170 570 215 HOH HOH . N 6 HOH A 171 571 118 HOH HOH . N 6 HOH A 172 572 237 HOH HOH . N 6 HOH A 173 573 194 HOH HOH . N 6 HOH A 174 574 176 HOH HOH . N 6 HOH A 175 575 239 HOH HOH . N 6 HOH A 176 576 64 HOH HOH . N 6 HOH A 177 577 51 HOH HOH . N 6 HOH A 178 578 340 HOH HOH . N 6 HOH A 179 579 36 HOH HOH . N 6 HOH A 180 580 233 HOH HOH . N 6 HOH A 181 581 412 HOH HOH . N 6 HOH A 182 582 104 HOH HOH . N 6 HOH A 183 583 407 HOH HOH . N 6 HOH A 184 584 41 HOH HOH . N 6 HOH A 185 585 212 HOH HOH . N 6 HOH A 186 586 42 HOH HOH . N 6 HOH A 187 587 314 HOH HOH . N 6 HOH A 188 588 309 HOH HOH . N 6 HOH A 189 589 252 HOH HOH . N 6 HOH A 190 590 377 HOH HOH . N 6 HOH A 191 591 297 HOH HOH . N 6 HOH A 192 592 203 HOH HOH . N 6 HOH A 193 593 384 HOH HOH . N 6 HOH A 194 594 204 HOH HOH . N 6 HOH A 195 595 63 HOH HOH . N 6 HOH A 196 596 30 HOH HOH . N 6 HOH A 197 597 157 HOH HOH . N 6 HOH A 198 598 164 HOH HOH . N 6 HOH A 199 599 389 HOH HOH . N 6 HOH A 200 600 341 HOH HOH . N 6 HOH A 201 601 276 HOH HOH . N 6 HOH A 202 602 161 HOH HOH . N 6 HOH A 203 603 344 HOH HOH . N 6 HOH A 204 604 398 HOH HOH . N 6 HOH A 205 605 289 HOH HOH . N 6 HOH A 206 606 206 HOH HOH . N 6 HOH A 207 607 387 HOH HOH . N 6 HOH A 208 608 151 HOH HOH . N 6 HOH A 209 609 373 HOH HOH . N 6 HOH A 210 610 410 HOH HOH . N 6 HOH A 211 611 141 HOH HOH . N 6 HOH A 212 612 251 HOH HOH . N 6 HOH A 213 613 148 HOH HOH . N 6 HOH A 214 614 217 HOH HOH . N 6 HOH A 215 615 180 HOH HOH . N 6 HOH A 216 616 86 HOH HOH . N 6 HOH A 217 617 294 HOH HOH . N 6 HOH A 218 618 127 HOH HOH . N 6 HOH A 219 619 263 HOH HOH . N 6 HOH A 220 620 405 HOH HOH . N 6 HOH A 221 621 173 HOH HOH . N 6 HOH A 222 622 223 HOH HOH . N 6 HOH A 223 623 315 HOH HOH . N 6 HOH A 224 624 258 HOH HOH . N 6 HOH A 225 625 408 HOH HOH . N 6 HOH A 226 626 367 HOH HOH . N 6 HOH A 227 627 394 HOH HOH . N 6 HOH A 228 628 306 HOH HOH . N 6 HOH A 229 629 337 HOH HOH . N 6 HOH A 230 630 354 HOH HOH . N 6 HOH A 231 631 293 HOH HOH . N 6 HOH A 232 632 409 HOH HOH . N 6 HOH A 233 633 243 HOH HOH . N 6 HOH A 234 634 196 HOH HOH . N 6 HOH A 235 635 147 HOH HOH . N 6 HOH A 236 636 244 HOH HOH . N 6 HOH A 237 637 327 HOH HOH . N 6 HOH A 238 638 375 HOH HOH . N 6 HOH A 239 639 399 HOH HOH . N 6 HOH A 240 640 68 HOH HOH . N 6 HOH A 241 641 370 HOH HOH . N 6 HOH A 242 642 155 HOH HOH . N 6 HOH A 243 643 380 HOH HOH . N 6 HOH A 244 644 137 HOH HOH . N 6 HOH A 245 645 361 HOH HOH . N 6 HOH A 246 646 257 HOH HOH . N 6 HOH A 247 647 249 HOH HOH . N 6 HOH A 248 648 396 HOH HOH . N 6 HOH A 249 649 247 HOH HOH . N 6 HOH A 250 650 186 HOH HOH . N 6 HOH A 251 651 150 HOH HOH . N 6 HOH A 252 652 124 HOH HOH . N 6 HOH A 253 653 46 HOH HOH . N 6 HOH A 254 654 214 HOH HOH . N 6 HOH A 255 655 145 HOH HOH . N 6 HOH A 256 656 146 HOH HOH . N 6 HOH A 257 657 133 HOH HOH . N 6 HOH A 258 658 209 HOH HOH . N 6 HOH A 259 659 183 HOH HOH . N 6 HOH A 260 660 345 HOH HOH . N 6 HOH A 261 661 160 HOH HOH . N 6 HOH A 262 662 198 HOH HOH . N 6 HOH A 263 663 353 HOH HOH . N 6 HOH A 264 664 280 HOH HOH . N 6 HOH A 265 665 232 HOH HOH . N 6 HOH A 266 666 138 HOH HOH . N 6 HOH A 267 667 388 HOH HOH . N 6 HOH A 268 668 193 HOH HOH . N 6 HOH A 269 669 295 HOH HOH . N 6 HOH A 270 670 213 HOH HOH . N 6 HOH A 271 671 265 HOH HOH . N 6 HOH A 272 672 256 HOH HOH . N 6 HOH A 273 673 261 HOH HOH . N 6 HOH A 274 674 360 HOH HOH . N 6 HOH A 275 675 352 HOH HOH . N 6 HOH A 276 676 333 HOH HOH . N 6 HOH A 277 677 320 HOH HOH . N 6 HOH A 278 678 272 HOH HOH . N 6 HOH A 279 679 330 HOH HOH . N 6 HOH A 280 680 355 HOH HOH . N 6 HOH A 281 681 229 HOH HOH . N 6 HOH A 282 682 298 HOH HOH . N 6 HOH A 283 683 231 HOH HOH . N 6 HOH A 284 684 154 HOH HOH . N 6 HOH A 285 685 170 HOH HOH . N 6 HOH A 286 686 181 HOH HOH . N 6 HOH A 287 687 240 HOH HOH . N 6 HOH A 288 688 96 HOH HOH . N 6 HOH A 289 689 349 HOH HOH . N 6 HOH A 290 690 290 HOH HOH . N 6 HOH A 291 691 248 HOH HOH . N 6 HOH A 292 692 264 HOH HOH . N 6 HOH A 293 693 179 HOH HOH . N 6 HOH A 294 694 156 HOH HOH . N 6 HOH A 295 695 357 HOH HOH . N 6 HOH A 296 696 271 HOH HOH . N 6 HOH A 297 697 316 HOH HOH . N 6 HOH A 298 698 163 HOH HOH . N 6 HOH A 299 699 288 HOH HOH . N 6 HOH A 300 700 324 HOH HOH . N 6 HOH A 301 701 225 HOH HOH . N 6 HOH A 302 702 192 HOH HOH . N 6 HOH A 303 703 284 HOH HOH . N 6 HOH A 304 704 313 HOH HOH . N 6 HOH A 305 705 404 HOH HOH . N 6 HOH A 306 706 383 HOH HOH . N 6 HOH A 307 707 254 HOH HOH . N 6 HOH A 308 708 372 HOH HOH . N 6 HOH A 309 709 371 HOH HOH . N 6 HOH A 310 710 182 HOH HOH . N 6 HOH A 311 711 382 HOH HOH . N 6 HOH A 312 712 343 HOH HOH . N 6 HOH A 313 713 246 HOH HOH . N 6 HOH A 314 714 267 HOH HOH . N 6 HOH A 315 715 241 HOH HOH . N 6 HOH A 316 716 395 HOH HOH . N 6 HOH A 317 717 115 HOH HOH . N 6 HOH A 318 718 381 HOH HOH . N 6 HOH A 319 719 312 HOH HOH . N 6 HOH A 320 720 202 HOH HOH . N 6 HOH A 321 721 365 HOH HOH . N 6 HOH A 322 722 356 HOH HOH . N 6 HOH A 323 723 411 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 5 12.331 75.26 20.889 1 30.39 ? C1 EDO 306 A 1 HETATM 2 O O1 EDO . . . G 5 11.144 75.973 21.219 1 23.44 ? O1 EDO 306 A 1 HETATM 3 C C2 EDO . . . G 5 12.14 74.493 19.584 1 29.29 ? C2 EDO 306 A 1 HETATM 4 O O2 EDO . . . G 5 11.807 75.409 18.52 1 31.93 ? O2 EDO 306 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #