data_6ON6
#
_model_server_result.job_id            4JhXc1-202nCtODkUdz3Mw 
_model_server_result.datetime_utc      '2025-04-06 18:56:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6on6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6ON6 
#
_exptl.entry_id    6ON6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ON6 
_cell.length_a            46.61 
_cell.length_b            46.61 
_cell.length_c            196.849 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ON6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -23.305 40.365444 32.808167 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 46 1_555 A SG CYS 93 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 A ND2 ASN 90 A ASN 108 1_555 C C1 NAG . A NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6ON6 
_atom_sites.fract_transf_matrix[1][1]    0.021455 
_atom_sites.fract_transf_matrix[1][2]    0.012387 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024774 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00508 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 201 183 GOL GOL . 
C 3 NAG A 1 202 901 NAG NAG . 
D 4 HOH A 1 301 29 HOH HOH . 
D 4 HOH A 2 302 75 HOH HOH . 
D 4 HOH A 3 303 35 HOH HOH . 
D 4 HOH A 4 304 21 HOH HOH . 
D 4 HOH A 5 305 66 HOH HOH . 
D 4 HOH A 6 306 77 HOH HOH . 
D 4 HOH A 7 307 78 HOH HOH . 
D 4 HOH A 8 308 67 HOH HOH . 
D 4 HOH A 9 309 57 HOH HOH . 
D 4 HOH A 10 310 97 HOH HOH . 
D 4 HOH A 11 311 79 HOH HOH . 
D 4 HOH A 12 312 89 HOH HOH . 
D 4 HOH A 13 313 7 HOH HOH . 
D 4 HOH A 14 314 81 HOH HOH . 
D 4 HOH A 15 315 76 HOH HOH . 
D 4 HOH A 16 316 26 HOH HOH . 
D 4 HOH A 17 317 34 HOH HOH . 
D 4 HOH A 18 318 15 HOH HOH . 
D 4 HOH A 19 319 8 HOH HOH . 
D 4 HOH A 20 320 17 HOH HOH . 
D 4 HOH A 21 321 54 HOH HOH . 
D 4 HOH A 22 322 86 HOH HOH . 
D 4 HOH A 23 323 44 HOH HOH . 
D 4 HOH A 24 324 11 HOH HOH . 
D 4 HOH A 25 325 19 HOH HOH . 
D 4 HOH A 26 326 68 HOH HOH . 
D 4 HOH A 27 327 65 HOH HOH . 
D 4 HOH A 28 328 9 HOH HOH . 
D 4 HOH A 29 329 22 HOH HOH . 
D 4 HOH A 30 330 16 HOH HOH . 
D 4 HOH A 31 331 2 HOH HOH . 
D 4 HOH A 32 332 10 HOH HOH . 
D 4 HOH A 33 333 20 HOH HOH . 
D 4 HOH A 34 334 80 HOH HOH . 
D 4 HOH A 35 335 71 HOH HOH . 
D 4 HOH A 36 336 51 HOH HOH . 
D 4 HOH A 37 337 24 HOH HOH . 
D 4 HOH A 38 338 12 HOH HOH . 
D 4 HOH A 39 339 62 HOH HOH . 
D 4 HOH A 40 340 23 HOH HOH . 
D 4 HOH A 41 341 18 HOH HOH . 
D 4 HOH A 42 342 32 HOH HOH . 
D 4 HOH A 43 343 39 HOH HOH . 
D 4 HOH A 44 344 6 HOH HOH . 
D 4 HOH A 45 345 31 HOH HOH . 
D 4 HOH A 46 346 93 HOH HOH . 
D 4 HOH A 47 347 52 HOH HOH . 
D 4 HOH A 48 348 82 HOH HOH . 
D 4 HOH A 49 349 13 HOH HOH . 
D 4 HOH A 50 350 56 HOH HOH . 
D 4 HOH A 51 351 58 HOH HOH . 
D 4 HOH A 52 352 46 HOH HOH . 
D 4 HOH A 53 353 1 HOH HOH . 
D 4 HOH A 54 354 3 HOH HOH . 
D 4 HOH A 55 355 41 HOH HOH . 
D 4 HOH A 56 356 36 HOH HOH . 
D 4 HOH A 57 357 30 HOH HOH . 
D 4 HOH A 58 358 25 HOH HOH . 
D 4 HOH A 59 359 5 HOH HOH . 
D 4 HOH A 60 360 4 HOH HOH . 
D 4 HOH A 61 361 38 HOH HOH . 
D 4 HOH A 62 362 33 HOH HOH . 
D 4 HOH A 63 363 95 HOH HOH . 
D 4 HOH A 64 364 74 HOH HOH . 
D 4 HOH A 65 365 84 HOH HOH . 
D 4 HOH A 66 366 64 HOH HOH . 
D 4 HOH A 67 367 83 HOH HOH . 
D 4 HOH A 68 368 42 HOH HOH . 
D 4 HOH A 69 369 72 HOH HOH . 
D 4 HOH A 70 370 27 HOH HOH . 
D 4 HOH A 71 371 37 HOH HOH . 
D 4 HOH A 72 372 28 HOH HOH . 
D 4 HOH A 73 373 48 HOH HOH . 
D 4 HOH A 74 374 96 HOH HOH . 
D 4 HOH A 75 375 70 HOH HOH . 
D 4 HOH A 76 376 91 HOH HOH . 
D 4 HOH A 77 377 69 HOH HOH . 
D 4 HOH A 78 378 59 HOH HOH . 
D 4 HOH A 79 379 47 HOH HOH . 
D 4 HOH A 80 380 43 HOH HOH . 
D 4 HOH A 81 381 73 HOH HOH . 
D 4 HOH A 82 382 61 HOH HOH . 
D 4 HOH A 83 383 94 HOH HOH . 
D 4 HOH A 84 384 50 HOH HOH . 
D 4 HOH A 85 385 55 HOH HOH . 
D 4 HOH A 86 386 60 HOH HOH . 
D 4 HOH A 87 387 40 HOH HOH . 
D 4 HOH A 88 388 49 HOH HOH . 
D 4 HOH A 89 389 88 HOH HOH . 
D 4 HOH A 90 390 90 HOH HOH . 
D 4 HOH A 91 391 92 HOH HOH . 
D 4 HOH A 92 392 45 HOH HOH . 
D 4 HOH A 93 393 14 HOH HOH . 
D 4 HOH A 94 394 63 HOH HOH . 
D 4 HOH A 95 395 85 HOH HOH . 
D 4 HOH A 96 396 87 HOH HOH . 
D 4 HOH A 97 397 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 2.165 0.28 15.327 0.5 31.32 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . B 2 3.434 -0.095 14.918 0.5 30.69 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . B 2 2.398 1.334 16.421 0.5 28.96 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . B 2 3.092 2.434 15.928 0.5 30.53 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . B 2 0.979 1.675 16.97 0.5 28.67 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . B 2 1.118 2.775 17.792 0.5 30 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#