data_6OO4
#
_model_server_result.job_id            G4FYYk0z-zCwZjzfv9beww 
_model_server_result.datetime_utc      '2024-11-21 13:52:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6oo4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1001}' 
#
_entry.id    6OO4 
#
_exptl.entry_id    6OO4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              628.708 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            resiniferatoxin 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OO4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OO4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OE2 GLU 528 A GLU 528 1_555 E CBT 6EU . A 6EU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? 
covale ? covale2 C OE2 GLU 528 C GLU 528 1_555 G CBT 6EU . C 6EU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? 
#
_chem_comp.formula           'C37 H40 O9' 
_chem_comp.formula_weight    628.708 
_chem_comp.id                6EU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              resiniferatoxin 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     RTX 
#
_atom_sites.entry_id                     6OO4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 6EU A 1 1001 1001 6EU 6EU . 
F 2 6EU B 1 1001 1001 6EU 6EU . 
G 2 6EU C 1 1001 1001 6EU 6EU . 
H 2 6EU D 1 1001 1001 6EU 6EU . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CBT 6EU . . . G 2 118.143 152.382 149.13 1 145.9 ? CBT 6EU 1001 C 1 
HETATM 2 O OAH 6EU . . . G 2 117.859 153.496 149.935 1 145.9 ? OAH 6EU 1001 C 1 
HETATM 3 C CBQ 6EU . . . G 2 117.83 153.225 151.308 1 145.9 ? CBQ 6EU 1001 C 1 
HETATM 4 C CBO 6EU . . . G 2 118.863 152.463 151.893 1 145.9 ? CBO 6EU 1001 C 1 
HETATM 5 C CBS 6EU . . . G 2 116.779 153.713 152.1 1 145.9 ? CBS 6EU 1001 C 1 
HETATM 6 O OAI 6EU . . . G 2 115.747 154.47 151.551 1 145.9 ? OAI 6EU 1001 C 1 
HETATM 7 C CBR 6EU . . . G 2 116.749 153.455 153.434 1 145.9 ? CBR 6EU 1001 C 1 
HETATM 8 C CBP 6EU . . . G 2 117.772 152.697 154.021 1 145.9 ? CBP 6EU 1001 C 1 
HETATM 9 C CBN 6EU . . . G 2 118.827 152.212 153.232 1 145.9 ? CBN 6EU 1001 C 1 
HETATM 10 C CBM 6EU . . . G 2 119.935 151.375 153.924 1 145.9 ? CBM 6EU 1001 C 1 
HETATM 11 C CBK 6EU . . . G 2 119.31 150.285 154.791 1 145.9 ? CBK 6EU 1001 C 1 
HETATM 12 O OAG 6EU . . . G 2 118.837 149.32 154.302 1 145.9 ? OAG 6EU 1001 C 1 
HETATM 13 O OAF 6EU . . . G 2 119.282 150.421 156.212 1 145.9 ? OAF 6EU 1001 C 1 
HETATM 14 C CBC 6EU . . . G 2 119.78 149.268 156.847 1 145.9 ? CBC 6EU 1001 C 1 
HETATM 15 C CAX 6EU . . . G 2 118.605 148.705 157.702 1 145.9 ? CAX 6EU 1001 C 1 
HETATM 16 C CAS 6EU . . . G 2 117.922 147.394 157.125 1 145.9 ? CAS 6EU 1001 C 1 
HETATM 17 C CAK 6EU . . . G 2 116.288 147.145 157.322 1 145.9 ? CAK 6EU 1001 C 1 
HETATM 18 C CAU 6EU . . . G 2 117.698 149.715 158.449 1 145.9 ? CAU 6EU 1001 C 1 
HETATM 19 C CAR 6EU . . . G 2 116.813 149.143 159.541 1 145.9 ? CAR 6EU 1001 C 1 
HETATM 20 O OAD 6EU . . . G 2 115.545 149.651 159.394 1 145.9 ? OAD 6EU 1001 C 1 
HETATM 21 C CAZ 6EU . . . G 2 117.343 149.697 160.871 1 145.9 ? CAZ 6EU 1001 C 1 
HETATM 22 O OAE 6EU . . . G 2 118.079 150.577 161.002 1 145.9 ? OAE 6EU 1001 C 1 
HETATM 23 C CBA 6EU . . . G 2 116.709 148.858 161.924 1 145.9 ? CBA 6EU 1001 C 1 
HETATM 24 C CBF 6EU . . . G 2 116.599 149.168 163.418 1 145.9 ? CBF 6EU 1001 C 1 
HETATM 25 C CAW 6EU . . . G 2 116.593 147.502 161.289 1 145.9 ? CAW 6EU 1001 C 1 
HETATM 26 C CAO 6EU . . . G 2 116.841 147.655 159.767 1 145.9 ? CAO 6EU 1001 C 1 
HETATM 27 C CAJ 6EU . . . G 2 115.94 146.707 158.771 1 145.9 ? CAJ 6EU 1001 C 1 
HETATM 28 O OAA 6EU . . . G 2 116.532 145.042 158.774 1 145.9 ? OAA 6EU 1001 C 1 
HETATM 29 C CAN 6EU . . . G 2 114.48 146.593 159.04 1 145.9 ? CAN 6EU 1001 C 1 
HETATM 30 C CAT 6EU . . . G 2 114.103 145.447 160.061 1 145.9 ? CAT 6EU 1001 C 1 
HETATM 31 C CAP 6EU . . . G 2 113.624 146.21 157.75 1 145.9 ? CAP 6EU 1001 C 1 
HETATM 32 C CAM 6EU . . . G 2 114.569 145.39 156.652 1 145.9 ? CAM 6EU 1001 C 1 
HETATM 33 C CAV 6EU . . . G 2 113.846 145.065 155.396 1 145.9 ? CAV 6EU 1001 C 1 
HETATM 34 C CBB 6EU . . . G 2 112.686 145.752 155.059 1 145.9 ? CBB 6EU 1001 C 1 
HETATM 35 C CBD 6EU . . . G 2 114.388 143.96 154.472 1 145.9 ? CBD 6EU 1001 C 1 
HETATM 36 O OAC 6EU . . . G 2 114.983 144.393 157.123 1 145.9 ? OAC 6EU 1001 C 1 
HETATM 37 C CAL 6EU . . . G 2 115.97 146.199 156.363 1 145.9 ? CAL 6EU 1001 C 1 
HETATM 38 O OAB 6EU . . . G 2 116.848 145.239 156.5 1 145.9 ? OAB 6EU 1001 C 1 
HETATM 39 C CAQ 6EU . . . G 2 116.342 144.391 157.413 1 145.9 ? CAQ 6EU 1001 C 1 
HETATM 40 C CAY 6EU . . . G 2 116.977 142.992 157.287 1 145.9 ? CAY 6EU 1001 C 1 
HETATM 41 C CBE 6EU . . . G 2 117.752 142.691 158.619 1 145.9 ? CBE 6EU 1001 C 1 
HETATM 42 C CBG 6EU . . . G 2 119.051 143.107 158.758 1 145.9 ? CBG 6EU 1001 C 1 
HETATM 43 C CBI 6EU . . . G 2 119.722 142.837 159.949 1 145.9 ? CBI 6EU 1001 C 1 
HETATM 44 C CBL 6EU . . . G 2 119.065 142.154 160.98 1 145.9 ? CBL 6EU 1001 C 1 
HETATM 45 C CBJ 6EU . . . G 2 117.764 141.733 160.841 1 145.9 ? CBJ 6EU 1001 C 1 
HETATM 46 C CBH 6EU . . . G 2 117.093 142 159.655 1 145.9 ? CBH 6EU 1001 C 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           46 
#