data_6OO6 # _model_server_result.job_id 5niYMNeVfRZTQPixHmxRKg _model_server_result.datetime_utc '2024-11-13 04:39:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oo6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":203}' # _entry.id 6OO6 # _exptl.entry_id 6OO6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OO6 _cell.length_a 60.505 _cell.length_b 67.54 _cell.length_c 67.625 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OO6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6OO6 _atom_sites.fract_transf_matrix[1][1] 0.016528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 139 HEM HEM . D 3 PCR A 1 202 201 PCR PCR . E 4 SO4 A 1 203 1 SO4 SO4 . F 4 SO4 A 1 204 2 SO4 SO4 . G 2 HEM B 1 201 139 HEM HEM . H 3 PCR B 1 202 201 PCR PCR . I 5 EDO B 1 203 301 EDO EDO . J 6 HOH A 1 301 149 HOH HOH . J 6 HOH A 2 302 7 HOH HOH . J 6 HOH A 3 303 81 HOH HOH . J 6 HOH A 4 304 119 HOH HOH . J 6 HOH A 5 305 12 HOH HOH . J 6 HOH A 6 306 98 HOH HOH . J 6 HOH A 7 307 6 HOH HOH . J 6 HOH A 8 308 122 HOH HOH . J 6 HOH A 9 309 28 HOH HOH . J 6 HOH A 10 310 84 HOH HOH . J 6 HOH A 11 311 88 HOH HOH . J 6 HOH A 12 312 26 HOH HOH . J 6 HOH A 13 313 152 HOH HOH . J 6 HOH A 14 314 89 HOH HOH . J 6 HOH A 15 315 11 HOH HOH . J 6 HOH A 16 316 132 HOH HOH . J 6 HOH A 17 317 106 HOH HOH . J 6 HOH A 18 318 33 HOH HOH . J 6 HOH A 19 319 27 HOH HOH . J 6 HOH A 20 320 86 HOH HOH . J 6 HOH A 21 321 17 HOH HOH . J 6 HOH A 22 322 58 HOH HOH . J 6 HOH A 23 323 112 HOH HOH . J 6 HOH A 24 324 2 HOH HOH . J 6 HOH A 25 325 120 HOH HOH . J 6 HOH A 26 326 18 HOH HOH . J 6 HOH A 27 327 34 HOH HOH . J 6 HOH A 28 328 35 HOH HOH . J 6 HOH A 29 329 24 HOH HOH . J 6 HOH A 30 330 131 HOH HOH . J 6 HOH A 31 331 1 HOH HOH . J 6 HOH A 32 332 148 HOH HOH . J 6 HOH A 33 333 82 HOH HOH . J 6 HOH A 34 334 36 HOH HOH . J 6 HOH A 35 335 25 HOH HOH . J 6 HOH A 36 336 87 HOH HOH . J 6 HOH A 37 337 60 HOH HOH . J 6 HOH A 38 338 105 HOH HOH . J 6 HOH A 39 339 23 HOH HOH . J 6 HOH A 40 340 76 HOH HOH . J 6 HOH A 41 341 97 HOH HOH . J 6 HOH A 42 342 30 HOH HOH . J 6 HOH A 43 343 95 HOH HOH . J 6 HOH A 44 344 37 HOH HOH . J 6 HOH A 45 345 125 HOH HOH . J 6 HOH A 46 346 16 HOH HOH . J 6 HOH A 47 347 20 HOH HOH . J 6 HOH A 48 348 121 HOH HOH . J 6 HOH A 49 349 39 HOH HOH . J 6 HOH A 50 350 110 HOH HOH . J 6 HOH A 51 351 9 HOH HOH . J 6 HOH A 52 352 151 HOH HOH . J 6 HOH A 53 353 144 HOH HOH . J 6 HOH A 54 354 141 HOH HOH . J 6 HOH A 55 355 13 HOH HOH . J 6 HOH A 56 356 8 HOH HOH . J 6 HOH A 57 357 83 HOH HOH . J 6 HOH A 58 358 91 HOH HOH . J 6 HOH A 59 359 135 HOH HOH . J 6 HOH A 60 360 19 HOH HOH . J 6 HOH A 61 361 150 HOH HOH . J 6 HOH A 62 362 96 HOH HOH . J 6 HOH A 63 363 31 HOH HOH . J 6 HOH A 64 364 85 HOH HOH . J 6 HOH A 65 365 103 HOH HOH . J 6 HOH A 66 366 118 HOH HOH . J 6 HOH A 67 367 10 HOH HOH . J 6 HOH A 68 368 147 HOH HOH . J 6 HOH A 69 369 130 HOH HOH . J 6 HOH A 70 370 133 HOH HOH . J 6 HOH A 71 371 146 HOH HOH . J 6 HOH A 72 372 116 HOH HOH . J 6 HOH A 73 373 158 HOH HOH . J 6 HOH A 74 374 32 HOH HOH . J 6 HOH A 75 375 142 HOH HOH . J 6 HOH A 76 376 143 HOH HOH . J 6 HOH A 77 377 138 HOH HOH . K 6 HOH B 1 301 155 HOH HOH . K 6 HOH B 2 302 41 HOH HOH . K 6 HOH B 3 303 108 HOH HOH . K 6 HOH B 4 304 64 HOH HOH . K 6 HOH B 5 305 69 HOH HOH . K 6 HOH B 6 306 3 HOH HOH . K 6 HOH B 7 307 49 HOH HOH . K 6 HOH B 8 308 15 HOH HOH . K 6 HOH B 9 309 54 HOH HOH . K 6 HOH B 10 310 153 HOH HOH . K 6 HOH B 11 311 62 HOH HOH . K 6 HOH B 12 312 145 HOH HOH . K 6 HOH B 13 313 53 HOH HOH . K 6 HOH B 14 314 117 HOH HOH . K 6 HOH B 15 315 128 HOH HOH . K 6 HOH B 16 316 21 HOH HOH . K 6 HOH B 17 317 126 HOH HOH . K 6 HOH B 18 318 47 HOH HOH . K 6 HOH B 19 319 79 HOH HOH . K 6 HOH B 20 320 50 HOH HOH . K 6 HOH B 21 321 4 HOH HOH . K 6 HOH B 22 322 57 HOH HOH . K 6 HOH B 23 323 45 HOH HOH . K 6 HOH B 24 324 52 HOH HOH . K 6 HOH B 25 325 139 HOH HOH . K 6 HOH B 26 326 71 HOH HOH . K 6 HOH B 27 327 113 HOH HOH . K 6 HOH B 28 328 44 HOH HOH . K 6 HOH B 29 329 115 HOH HOH . K 6 HOH B 30 330 129 HOH HOH . K 6 HOH B 31 331 67 HOH HOH . K 6 HOH B 32 332 68 HOH HOH . K 6 HOH B 33 333 156 HOH HOH . K 6 HOH B 34 334 65 HOH HOH . K 6 HOH B 35 335 70 HOH HOH . K 6 HOH B 36 336 61 HOH HOH . K 6 HOH B 37 337 114 HOH HOH . K 6 HOH B 38 338 80 HOH HOH . K 6 HOH B 39 339 73 HOH HOH . K 6 HOH B 40 340 55 HOH HOH . K 6 HOH B 41 341 14 HOH HOH . K 6 HOH B 42 342 77 HOH HOH . K 6 HOH B 43 343 93 HOH HOH . K 6 HOH B 44 344 63 HOH HOH . K 6 HOH B 45 345 66 HOH HOH . K 6 HOH B 46 346 94 HOH HOH . K 6 HOH B 47 347 72 HOH HOH . K 6 HOH B 48 348 134 HOH HOH . K 6 HOH B 49 349 100 HOH HOH . K 6 HOH B 50 350 51 HOH HOH . K 6 HOH B 51 351 5 HOH HOH . K 6 HOH B 52 352 22 HOH HOH . K 6 HOH B 53 353 48 HOH HOH . K 6 HOH B 54 354 104 HOH HOH . K 6 HOH B 55 355 127 HOH HOH . K 6 HOH B 56 356 92 HOH HOH . K 6 HOH B 57 357 90 HOH HOH . K 6 HOH B 58 358 78 HOH HOH . K 6 HOH B 59 359 38 HOH HOH . K 6 HOH B 60 360 107 HOH HOH . K 6 HOH B 61 361 124 HOH HOH . K 6 HOH B 62 362 40 HOH HOH . K 6 HOH B 63 363 56 HOH HOH . K 6 HOH B 64 364 74 HOH HOH . K 6 HOH B 65 365 59 HOH HOH . K 6 HOH B 66 366 154 HOH HOH . K 6 HOH B 67 367 43 HOH HOH . K 6 HOH B 68 368 102 HOH HOH . K 6 HOH B 69 369 140 HOH HOH . K 6 HOH B 70 370 46 HOH HOH . K 6 HOH B 71 371 157 HOH HOH . K 6 HOH B 72 372 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 5 -10.921 19.015 -14.336 1 14.95 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . I 5 -9.583 18.528 -14.36 1 14.57 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . I 5 -11.959 17.938 -14.357 1 15.59 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . I 5 -11.855 17.033 -15.45 1 15.46 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #