data_6OOA # _model_server_result.job_id Lzw0Zemz4n-bt2Ebpa5vvQ _model_server_result.datetime_utc '2024-11-13 03:41:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ooa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6OOA # _exptl.entry_id 6OOA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 478.648 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3aS,4R,5S,6R,8R,9R,9aR,10R)-6-ethyl-5-hydroxy-4,6,9,10-tetramethyl-1-oxodecahydro-3a,9-propanocyclopenta[8]annulen-8-yl [(5-amino-1H-1,2,4-triazol-3-yl)sulfanyl]acetate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OOA _cell.length_a 76.499 _cell.length_b 101.59 _cell.length_c 125.529 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OOA _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -76.499 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -76.499 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 422 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 442 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.481 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H38 N4 O4 S' _chem_comp.formula_weight 478.648 _chem_comp.id MWY _chem_comp.mon_nstd_flag . _chem_comp.name '(3aS,4R,5S,6R,8R,9R,9aR,10R)-6-ethyl-5-hydroxy-4,6,9,10-tetramethyl-1-oxodecahydro-3a,9-propanocyclopenta[8]annulen-8-yl [(5-amino-1H-1,2,4-triazol-3-yl)sulfanyl]acetate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C12 MWY doub 332 n n C21 C06 MWY sing 333 n n C12 C14 MWY sing 334 n n C12 C11 MWY sing 335 n n C08 C07 MWY sing 336 n n C08 C09 MWY sing 337 n n C14 C15 MWY sing 338 n n C07 C06 MWY sing 339 n n C07 C20 MWY sing 340 n n C06 C11 MWY sing 341 n n C06 C05 MWY sing 342 n n O24 C23 MWY doub 343 n n C11 C10 MWY sing 344 n n C09 C10 MWY sing 345 n n S26 C27 MWY sing 346 n n S26 C25 MWY sing 347 n n C15 C10 MWY sing 348 n n C23 C25 MWY sing 349 n n C23 O22 MWY sing 350 n n C10 C16 MWY sing 351 n n N28 C27 MWY sing 352 n y N28 C29 MWY doub 353 n y C05 O22 MWY sing 354 n n C05 C04 MWY sing 355 n n C27 N31 MWY doub 356 n y C29 N32 MWY sing 357 n n C29 N30 MWY sing 358 n y C04 C03 MWY sing 359 n n N31 N30 MWY sing 360 n y C16 C17 MWY sing 361 n n C16 C19 MWY sing 362 n n C17 C03 MWY sing 363 n n C17 O18 MWY sing 364 n n C03 C33 MWY sing 365 n n C03 C02 MWY sing 366 n n C02 C01 MWY sing 367 n n C01 H1 MWY sing 368 n n C01 H2 MWY sing 369 n n C01 H3 MWY sing 370 n n C02 H4 MWY sing 371 n n C02 H5 MWY sing 372 n n C04 H6 MWY sing 373 n n C04 H7 MWY sing 374 n n C05 H8 MWY sing 375 n n C07 H9 MWY sing 376 n n C08 H10 MWY sing 377 n n C08 H11 MWY sing 378 n n C09 H12 MWY sing 379 n n C09 H13 MWY sing 380 n n C11 H14 MWY sing 381 n n C14 H15 MWY sing 382 n n C14 H16 MWY sing 383 n n C15 H17 MWY sing 384 n n C15 H18 MWY sing 385 n n C16 H19 MWY sing 386 n n C17 H20 MWY sing 387 n n C19 H21 MWY sing 388 n n C19 H22 MWY sing 389 n n C19 H23 MWY sing 390 n n C20 H24 MWY sing 391 n n C20 H25 MWY sing 392 n n C20 H26 MWY sing 393 n n C21 H27 MWY sing 394 n n C21 H28 MWY sing 395 n n C21 H29 MWY sing 396 n n C25 H30 MWY sing 397 n n C25 H31 MWY sing 398 n n C33 H32 MWY sing 399 n n C33 H33 MWY sing 400 n n C33 H34 MWY sing 401 n n N32 H36 MWY sing 402 n n N32 H37 MWY sing 403 n n O18 H38 MWY sing 404 n n N30 H35 MWY sing 405 n n # _atom_sites.entry_id 6OOA _atom_sites.fract_transf_matrix[1][1] 0.013072 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009843 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 GOL A 1 602 600 GOL GOL . D 4 MWY A 1 603 700 MWY AZM . E 5 HOH A 1 701 14 HOH HOH . E 5 HOH A 2 702 9 HOH HOH . E 5 HOH A 3 703 8 HOH HOH . E 5 HOH A 4 704 13 HOH HOH . E 5 HOH A 5 705 1 HOH HOH . E 5 HOH A 6 706 11 HOH HOH . E 5 HOH A 7 707 2 HOH HOH . E 5 HOH A 8 708 10 HOH HOH . E 5 HOH A 9 709 4 HOH HOH . E 5 HOH A 10 710 12 HOH HOH . E 5 HOH A 11 711 15 HOH HOH . E 5 HOH A 12 712 7 HOH HOH . E 5 HOH A 13 713 3 HOH HOH . E 5 HOH A 14 714 6 HOH HOH . E 5 HOH A 15 715 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 MWY . . . D 4 -23.302 -19.801 -5.251 1 81.34 ? C01 MWY 603 A 1 HETATM 2 C C02 MWY . . . D 4 -21.971 -19.24 -5.768 1 75.71 ? C02 MWY 603 A 1 HETATM 3 C C03 MWY . . . D 4 -21.992 -18.058 -6.75 1 83.47 ? C03 MWY 603 A 1 HETATM 4 C C04 MWY . . . D 4 -22.826 -18.44 -8.076 1 76.74 ? C04 MWY 603 A 1 HETATM 5 C C05 MWY . . . D 4 -22.377 -19.82 -8.693 1 85.45 ? C05 MWY 603 A 1 HETATM 6 C C06 MWY . . . D 4 -21.611 -19.603 -10.097 1 88.69 ? C06 MWY 603 A 1 HETATM 7 C C07 MWY . . . D 4 -20.821 -20.881 -10.573 1 81.67 ? C07 MWY 603 A 1 HETATM 8 C C08 MWY . . . D 4 -19.348 -20.613 -10.838 1 82.16 ? C08 MWY 603 A 1 HETATM 9 C C09 MWY . . . D 4 -18.675 -20.077 -9.546 1 77.5 ? C09 MWY 603 A 1 HETATM 10 C C10 MWY . . . D 4 -19.312 -18.799 -8.991 1 72.17 ? C10 MWY 603 A 1 HETATM 11 C C11 MWY . . . D 4 -20.583 -18.389 -9.826 1 74.59 ? C11 MWY 603 A 1 HETATM 12 C C12 MWY . . . D 4 -19.945 -17.622 -11.047 1 76.09 ? C12 MWY 603 A 1 HETATM 13 C C14 MWY . . . D 4 -18.499 -17.283 -10.718 1 68.97 ? C14 MWY 603 A 1 HETATM 14 C C15 MWY . . . D 4 -18.371 -17.595 -9.193 1 58.87 ? C15 MWY 603 A 1 HETATM 15 C C16 MWY . . . D 4 -19.662 -18.948 -7.491 1 84.97 ? C16 MWY 603 A 1 HETATM 16 C C17 MWY . . . D 4 -20.523 -17.713 -7.026 1 99.89 ? C17 MWY 603 A 1 HETATM 17 C C19 MWY . . . D 4 -18.454 -19.227 -6.631 1 72.97 ? C19 MWY 603 A 1 HETATM 18 C C20 MWY . . . D 4 -20.796 -21.988 -9.611 1 99.23 ? C20 MWY 603 A 1 HETATM 19 C C21 MWY . . . D 4 -22.649 -19.227 -11.162 1 80.51 ? C21 MWY 603 A 1 HETATM 20 C C23 MWY . . . D 4 -24.525 -21.211 -9.059 1 116.36 ? C23 MWY 603 A 1 HETATM 21 C C25 MWY . . . D 4 -25.409 -22.312 -8.523 1 144.13 ? C25 MWY 603 A 1 HETATM 22 C C27 MWY . . . D 4 -28.222 -23.374 -8.641 1 169.02 ? C27 MWY 603 A 1 HETATM 23 C C29 MWY . . . D 4 -29.384 -25.058 -8.119 1 168 ? C29 MWY 603 A 1 HETATM 24 C C33 MWY . . . D 4 -22.623 -16.834 -6.083 1 75.38 ? C33 MWY 603 A 1 HETATM 25 N N28 MWY . . . D 4 -28.362 -24.684 -8.912 1 166.59 ? N28 MWY 603 A 1 HETATM 26 N N30 MWY . . . D 4 -29.857 -24.023 -7.383 1 169.42 ? N30 MWY 603 A 1 HETATM 27 N N31 MWY . . . D 4 -29.101 -22.933 -7.723 1 168.7 ? N31 MWY 603 A 1 HETATM 28 N N32 MWY . . . D 4 -29.906 -26.439 -8.078 1 166.52 ? N32 MWY 603 A 1 HETATM 29 O O13 MWY . . . D 4 -20.462 -17.337 -12.098 1 88.7 ? O13 MWY 603 A 1 HETATM 30 O O18 MWY . . . D 4 -19.985 -17.146 -5.825 1 105.48 ? O18 MWY 603 A 1 HETATM 31 O O22 MWY . . . D 4 -23.283 -21 -8.409 1 83.28 ? O22 MWY 603 A 1 HETATM 32 O O24 MWY . . . D 4 -24.906 -20.563 -10.007 1 120.8 ? O24 MWY 603 A 1 HETATM 33 S S26 MWY . . . D 4 -26.968 -22.311 -9.479 1 182.68 ? S26 MWY 603 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #