data_6OOB # _model_server_result.job_id 66bgxrjrlB8lIivOoivSqw _model_server_result.datetime_utc '2024-11-24 05:43:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 6OOB # _exptl.entry_id 6OOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 372.412 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(2Z,6S)-6,7-dihydroxy-3,7-dimethyloct-2-en-1-yl]oxy}-7H-furo[3,2-g][1]benzopyran-7-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OOB _cell.length_a 77.906 _cell.length_b 102.383 _cell.length_c 127.464 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -77.906 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -77.906 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 D O HOH . A HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? # _chem_comp.formula 'C21 H24 O6' _chem_comp.formula_weight 372.412 _chem_comp.id MWS _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(2Z,6S)-6,7-dihydroxy-3,7-dimethyloct-2-en-1-yl]oxy}-7H-furo[3,2-g][1]benzopyran-7-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 C07 MWS sing 319 n n O10 C07 MWS sing 320 n n C07 C08 MWS sing 321 n n C07 C05 MWS sing 322 n n O06 C05 MWS sing 323 n n C05 C04 MWS sing 324 n n C04 C03 MWS sing 325 n n C26 C25 MWS doub 326 n y C26 O27 MWS sing 327 n y C01 C02 MWS sing 328 n n C25 C24 MWS sing 329 n y C02 C03 MWS sing 330 n n C02 C11 MWS doub 331 z n C11 C12 MWS sing 332 n n C12 O13 MWS sing 333 n n O27 C23 MWS sing 334 n y C24 C23 MWS doub 335 n y C24 C14 MWS sing 336 n y O13 C14 MWS sing 337 n n C23 C22 MWS sing 338 n y C14 C15 MWS doub 339 n y C22 C21 MWS doub 340 n y C15 C21 MWS sing 341 n y C15 C16 MWS sing 342 n n C21 O20 MWS sing 343 n n C16 C17 MWS doub 344 n n O20 C18 MWS sing 345 n n C17 C18 MWS sing 346 n n C18 O19 MWS doub 347 n n C11 H1 MWS sing 348 n n C12 H2 MWS sing 349 n n C12 H3 MWS sing 350 n n C16 H4 MWS sing 351 n n C17 H5 MWS sing 352 n n C01 H6 MWS sing 353 n n C01 H7 MWS sing 354 n n C01 H8 MWS sing 355 n n C03 H9 MWS sing 356 n n C03 H10 MWS sing 357 n n C04 H11 MWS sing 358 n n C04 H12 MWS sing 359 n n C05 H13 MWS sing 360 n n C08 H14 MWS sing 361 n n C08 H15 MWS sing 362 n n C08 H16 MWS sing 363 n n C09 H17 MWS sing 364 n n C09 H18 MWS sing 365 n n C09 H19 MWS sing 366 n n C22 H20 MWS sing 367 n n C25 H21 MWS sing 368 n n C26 H22 MWS sing 369 n n O06 H23 MWS sing 370 n n O10 H24 MWS sing 371 n n # _atom_sites.entry_id 6OOB _atom_sites.fract_transf_matrix[1][1] 0.012836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 MWS A 1 602 700 MWS BER . D 4 HOH A 1 701 28 HOH HOH . D 4 HOH A 2 702 15 HOH HOH . D 4 HOH A 3 703 19 HOH HOH . D 4 HOH A 4 704 22 HOH HOH . D 4 HOH A 5 705 36 HOH HOH . D 4 HOH A 6 706 9 HOH HOH . D 4 HOH A 7 707 20 HOH HOH . D 4 HOH A 8 708 27 HOH HOH . D 4 HOH A 9 709 24 HOH HOH . D 4 HOH A 10 710 33 HOH HOH . D 4 HOH A 11 711 6 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 38 HOH HOH . D 4 HOH A 14 714 7 HOH HOH . D 4 HOH A 15 715 2 HOH HOH . D 4 HOH A 16 716 1 HOH HOH . D 4 HOH A 17 717 39 HOH HOH . D 4 HOH A 18 718 30 HOH HOH . D 4 HOH A 19 719 35 HOH HOH . D 4 HOH A 20 720 3 HOH HOH . D 4 HOH A 21 721 34 HOH HOH . D 4 HOH A 22 722 29 HOH HOH . D 4 HOH A 23 723 16 HOH HOH . D 4 HOH A 24 724 13 HOH HOH . D 4 HOH A 25 725 8 HOH HOH . D 4 HOH A 26 726 25 HOH HOH . D 4 HOH A 27 727 31 HOH HOH . D 4 HOH A 28 728 17 HOH HOH . D 4 HOH A 29 729 14 HOH HOH . D 4 HOH A 30 730 11 HOH HOH . D 4 HOH A 31 731 26 HOH HOH . D 4 HOH A 32 732 32 HOH HOH . D 4 HOH A 33 733 37 HOH HOH . D 4 HOH A 34 734 23 HOH HOH . D 4 HOH A 35 735 4 HOH HOH . D 4 HOH A 36 736 21 HOH HOH . D 4 HOH A 37 737 10 HOH HOH . D 4 HOH A 38 738 18 HOH HOH . D 4 HOH A 39 739 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 MWS . . . C 3 -19.58 -15.362 -12.664 1 139.54 ? C11 MWS 602 A 1 HETATM 2 C C12 MWS . . . C 3 -20.074 -16.767 -12.281 1 141.29 ? C12 MWS 602 A 1 HETATM 3 C C14 MWS . . . C 3 -19.812 -18.756 -10.827 1 122.82 ? C14 MWS 602 A 1 HETATM 4 C C15 MWS . . . C 3 -19.855 -18.922 -9.411 1 98.96 ? C15 MWS 602 A 1 HETATM 5 C C16 MWS . . . C 3 -19.342 -17.917 -8.498 1 84.46 ? C16 MWS 602 A 1 HETATM 6 C C17 MWS . . . C 3 -19.405 -18.122 -7.111 1 113.69 ? C17 MWS 602 A 1 HETATM 7 C C18 MWS . . . C 3 -19.985 -19.368 -6.601 1 129.24 ? C18 MWS 602 A 1 HETATM 8 C C01 MWS . . . C 3 -19.922 -13.028 -13.263 1 141.52 ? C01 MWS 602 A 1 HETATM 9 C C02 MWS . . . C 3 -20.465 -14.345 -12.907 1 137.42 ? C02 MWS 602 A 1 HETATM 10 C C03 MWS . . . C 3 -22.024 -14.526 -12.805 1 135.52 ? C03 MWS 602 A 1 HETATM 11 C C04 MWS . . . C 3 -22.728 -15.426 -13.897 1 143.66 ? C04 MWS 602 A 1 HETATM 12 C C05 MWS . . . C 3 -24.254 -15.138 -14.208 1 152 ? C05 MWS 602 A 1 HETATM 13 C C07 MWS . . . C 3 -24.516 -14.36 -15.628 1 157.53 ? C07 MWS 602 A 1 HETATM 14 C C08 MWS . . . C 3 -25.76 -13.439 -15.506 1 159.31 ? C08 MWS 602 A 1 HETATM 15 C C09 MWS . . . C 3 -24.695 -15.379 -16.786 1 154.92 ? C09 MWS 602 A 1 HETATM 16 C C21 MWS . . . C 3 -20.418 -20.123 -8.854 1 111.57 ? C21 MWS 602 A 1 HETATM 17 C C22 MWS . . . C 3 -20.938 -21.143 -9.734 1 115.11 ? C22 MWS 602 A 1 HETATM 18 C C23 MWS . . . C 3 -20.89 -20.942 -11.166 1 117.48 ? C23 MWS 602 A 1 HETATM 19 C C24 MWS . . . C 3 -20.339 -19.77 -11.712 1 120.89 ? C24 MWS 602 A 1 HETATM 20 C C25 MWS . . . C 3 -20.442 -19.882 -13.188 1 133.81 ? C25 MWS 602 A 1 HETATM 21 C C26 MWS . . . C 3 -21.05 -21.121 -13.485 1 143.8 ? C26 MWS 602 A 1 HETATM 22 O O06 MWS . . . C 3 -24.944 -16.381 -14.297 1 156.86 ? O06 MWS 602 A 1 HETATM 23 O O10 MWS . . . C 3 -23.355 -13.582 -15.898 1 157.66 ? O10 MWS 602 A 1 HETATM 24 O O13 MWS . . . C 3 -19.273 -17.557 -11.343 1 139 ? O13 MWS 602 A 1 HETATM 25 O O19 MWS . . . C 3 -20.087 -19.665 -5.394 1 160.56 ? O19 MWS 602 A 1 HETATM 26 O O20 MWS . . . C 3 -20.464 -20.299 -7.5 1 109.04 ? O20 MWS 602 A 1 HETATM 27 O O27 MWS . . . C 3 -21.304 -21.723 -12.241 1 137.53 ? O27 MWS 602 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #