data_6OOR # _model_server_result.job_id VAQbqC1MtZmannGxGOrm0w _model_server_result.datetime_utc '2024-11-17 08:53:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oor # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6OOR # _exptl.entry_id 6OOR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OOR _cell.length_a 84.051 _cell.length_b 160.964 _cell.length_c 165.422 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 104 A CYS 104 1_555 A SG CYS 168 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? disulf ? disulf2 A SG CYS 208 A CYS 208 1_555 A SG CYS 263 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 C SG CYS 23 L CYS 23 1_555 C SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? disulf ? disulf5 C SG CYS 139 L CYS 139 1_555 C SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 C SG CYS 219 L CYS 219 1_555 D SG CYS 142 H CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 D SG CYS 22 H CYS 22 1_555 D SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf8 D SG CYS 154 H CYS 154 1_555 D SG CYS 207 H CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A O GLU 97 A GLU 97 1_555 E NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc2 A OE1 GLN 99 A GLN 99 1_555 E NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc3 A O ALA 119 A ALA 119 1_555 E NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc4 A O LEU 150 A LEU 150 1_555 F NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc5 A O ASP 153 A ASP 153 1_555 F NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? metalc ? metalc6 A OG SER 157 A SER 157 1_555 F NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.074 ? metalc ? metalc7 C OG SER 39 L SER 39 1_555 K NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc8 C O LEU 94 L LEU 94 1_555 K NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc9 C OG1 THR 96 L THR 96 1_555 K NA NA . L NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc10 J NA NA . L NA 301 1_555 D O TRP 112 H TRP 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OOR _atom_sites.fract_transf_matrix[1][1] 0.011898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NA A 1 301 303 NA NA . F 5 NA A 1 302 306 NA NA . G 6 UNL A 1 303 1 UNL UNK . H 6 UNL A 1 304 2 UNL UNK . I 6 UNL A 1 305 3 UNL UNK . J 5 NA L 1 301 304 NA NA . K 5 NA L 1 302 305 NA NA . L 7 HOH A 1 401 169 HOH HOH . L 7 HOH A 2 402 139 HOH HOH . L 7 HOH A 3 403 110 HOH HOH . L 7 HOH A 4 404 1 HOH HOH . L 7 HOH A 5 405 183 HOH HOH . L 7 HOH A 6 406 121 HOH HOH . L 7 HOH A 7 407 197 HOH HOH . L 7 HOH A 8 408 108 HOH HOH . L 7 HOH A 9 409 113 HOH HOH . L 7 HOH A 10 410 72 HOH HOH . L 7 HOH A 11 411 143 HOH HOH . L 7 HOH A 12 412 86 HOH HOH . L 7 HOH A 13 413 68 HOH HOH . L 7 HOH A 14 414 104 HOH HOH . L 7 HOH A 15 415 27 HOH HOH . L 7 HOH A 16 416 33 HOH HOH . L 7 HOH A 17 417 52 HOH HOH . L 7 HOH A 18 418 138 HOH HOH . L 7 HOH A 19 419 37 HOH HOH . L 7 HOH A 20 420 66 HOH HOH . L 7 HOH A 21 421 48 HOH HOH . L 7 HOH A 22 422 26 HOH HOH . L 7 HOH A 23 423 40 HOH HOH . L 7 HOH A 24 424 54 HOH HOH . L 7 HOH A 25 425 34 HOH HOH . L 7 HOH A 26 426 4 HOH HOH . L 7 HOH A 27 427 96 HOH HOH . L 7 HOH A 28 428 23 HOH HOH . L 7 HOH A 29 429 71 HOH HOH . L 7 HOH A 30 430 44 HOH HOH . L 7 HOH A 31 431 166 HOH HOH . L 7 HOH A 32 432 112 HOH HOH . L 7 HOH A 33 433 159 HOH HOH . L 7 HOH A 34 434 21 HOH HOH . L 7 HOH A 35 435 16 HOH HOH . L 7 HOH A 36 436 132 HOH HOH . L 7 HOH A 37 437 61 HOH HOH . L 7 HOH A 38 438 163 HOH HOH . L 7 HOH A 39 439 65 HOH HOH . L 7 HOH A 40 440 19 HOH HOH . L 7 HOH A 41 441 57 HOH HOH . L 7 HOH A 42 442 11 HOH HOH . L 7 HOH A 43 443 43 HOH HOH . L 7 HOH A 44 444 141 HOH HOH . L 7 HOH A 45 445 181 HOH HOH . L 7 HOH A 46 446 99 HOH HOH . L 7 HOH A 47 447 29 HOH HOH . L 7 HOH A 48 448 130 HOH HOH . L 7 HOH A 49 449 168 HOH HOH . L 7 HOH A 50 450 3 HOH HOH . L 7 HOH A 51 451 14 HOH HOH . L 7 HOH A 52 452 41 HOH HOH . L 7 HOH A 53 453 182 HOH HOH . L 7 HOH A 54 454 97 HOH HOH . L 7 HOH A 55 455 151 HOH HOH . L 7 HOH A 56 456 76 HOH HOH . L 7 HOH A 57 457 180 HOH HOH . L 7 HOH A 58 458 12 HOH HOH . L 7 HOH A 59 459 28 HOH HOH . L 7 HOH A 60 460 36 HOH HOH . L 7 HOH A 61 461 8 HOH HOH . L 7 HOH A 62 462 185 HOH HOH . L 7 HOH A 63 463 188 HOH HOH . L 7 HOH A 64 464 85 HOH HOH . M 7 HOH B 1 101 179 HOH HOH . M 7 HOH B 2 102 79 HOH HOH . M 7 HOH B 3 103 136 HOH HOH . M 7 HOH B 4 104 111 HOH HOH . M 7 HOH B 5 105 62 HOH HOH . M 7 HOH B 6 106 47 HOH HOH . M 7 HOH B 7 107 77 HOH HOH . M 7 HOH B 8 108 131 HOH HOH . M 7 HOH B 9 109 158 HOH HOH . M 7 HOH B 10 110 60 HOH HOH . M 7 HOH B 11 111 127 HOH HOH . M 7 HOH B 12 112 125 HOH HOH . M 7 HOH B 13 113 24 HOH HOH . M 7 HOH B 14 114 191 HOH HOH . M 7 HOH B 15 115 124 HOH HOH . M 7 HOH B 16 116 167 HOH HOH . M 7 HOH B 17 117 98 HOH HOH . M 7 HOH B 18 118 53 HOH HOH . M 7 HOH B 19 119 84 HOH HOH . M 7 HOH B 20 120 129 HOH HOH . M 7 HOH B 21 121 59 HOH HOH . M 7 HOH B 22 122 69 HOH HOH . M 7 HOH B 23 123 63 HOH HOH . M 7 HOH B 24 124 116 HOH HOH . M 7 HOH B 25 125 46 HOH HOH . N 7 HOH L 1 401 101 HOH HOH . N 7 HOH L 2 402 177 HOH HOH . N 7 HOH L 3 403 32 HOH HOH . N 7 HOH L 4 404 20 HOH HOH . N 7 HOH L 5 405 142 HOH HOH . N 7 HOH L 6 406 1 HOH HOH . N 7 HOH L 7 407 164 HOH HOH . N 7 HOH L 8 408 31 HOH HOH . N 7 HOH L 9 409 39 HOH HOH . N 7 HOH L 10 410 88 HOH HOH . N 7 HOH L 11 411 165 HOH HOH . N 7 HOH L 12 412 50 HOH HOH . N 7 HOH L 13 413 45 HOH HOH . N 7 HOH L 14 414 89 HOH HOH . N 7 HOH L 15 415 80 HOH HOH . N 7 HOH L 16 416 5 HOH HOH . N 7 HOH L 17 417 201 HOH HOH . N 7 HOH L 18 418 92 HOH HOH . N 7 HOH L 19 419 4 HOH HOH . N 7 HOH L 20 420 58 HOH HOH . O 7 HOH H 1 301 51 HOH HOH . O 7 HOH H 2 302 49 HOH HOH . O 7 HOH H 3 303 172 HOH HOH . O 7 HOH H 4 304 147 HOH HOH . O 7 HOH H 5 305 194 HOH HOH . O 7 HOH H 6 306 38 HOH HOH . O 7 HOH H 7 307 6 HOH HOH . O 7 HOH H 8 308 90 HOH HOH . O 7 HOH H 9 309 109 HOH HOH . O 7 HOH H 10 310 87 HOH HOH . O 7 HOH H 11 311 198 HOH HOH . O 7 HOH H 12 312 144 HOH HOH . O 7 HOH H 13 313 176 HOH HOH . O 7 HOH H 14 314 114 HOH HOH . O 7 HOH H 15 315 75 HOH HOH . O 7 HOH H 16 316 171 HOH HOH . O 7 HOH H 17 317 3 HOH HOH . O 7 HOH H 18 318 189 HOH HOH . O 7 HOH H 19 319 18 HOH HOH . O 7 HOH H 20 320 13 HOH HOH . O 7 HOH H 21 321 15 HOH HOH . O 7 HOH H 22 322 64 HOH HOH . O 7 HOH H 23 323 106 HOH HOH . O 7 HOH H 24 324 146 HOH HOH . O 7 HOH H 25 325 94 HOH HOH . O 7 HOH H 26 326 70 HOH HOH . O 7 HOH H 27 327 5 HOH HOH . O 7 HOH H 28 328 95 HOH HOH . O 7 HOH H 29 329 157 HOH HOH . O 7 HOH H 30 330 115 HOH HOH . O 7 HOH H 31 331 202 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 4.034 _atom_site.Cartn_y -7.118 _atom_site.Cartn_z 14.371 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #