data_6OPC
#
_model_server_result.job_id            I33Kf8u01bDhB4VeGO3E-Q 
_model_server_result.datetime_utc      '2024-11-15 08:54:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6opc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":907}' 
#
_entry.id    6OPC 
#
_exptl.entry_id    6OPC 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OPC 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OPC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 K N N 
? 6 N N N 
? 6 P N N 
? 6 S N N 
? 6 W N N 
? 6 Z N N 
? 6 CA N N 
? 6 FA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 262 A THR 262 1_555 N MG MG . A MG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc2 A OG1 THR 535 A THR 535 1_555 K MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc3 I O1B ADP . A ADP 901 1_555 J BE BEF . A BEF 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? 
metalc ? metalc4 L O1B ADP . A ADP 904 1_555 M BE BEF . A BEF 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.596 ? 
metalc ? metalc5 L O3B ADP . A ADP 904 1_555 N MG MG . A MG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc6 B OG1 THR 262 B THR 262 1_555 S MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc7 B OG1 THR 535 B THR 535 1_555 P MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc8 O O3B ADP . B ADP 901 1_555 P MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc9 O O1B ADP . B ADP 901 1_555 T BE BEF . C BEF 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? 
metalc ? metalc10 Q O1B ADP . B ADP 903 1_555 R BE BEF . B BEF 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? 
metalc ? metalc11 C OG1 THR 262 C THR 262 1_555 Z MG MG . C MG 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc12 C OG1 THR 535 C THR 535 1_555 W MG MG . C MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc13 U O1B ADP . C ADP 902 1_555 V BE BEF . C BEF 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? 
metalc ? metalc14 X O1B ADP . C ADP 905 1_555 Y BE BEF . C BEF 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? 
metalc ? metalc15 D OG1 THR 262 D THR 262 1_555 FA MG MG . D MG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc16 D OG1 THR 535 D THR 535 1_555 CA MG MG . D MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc17 AA O3B ADP . D ADP 901 1_555 BA BE BEF . D BEF 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? 
metalc ? metalc18 DA O3B ADP . D ADP 904 1_555 EA BE BEF . D BEF 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? 
metalc ? metalc19 DA O2B ADP . D ADP 904 1_555 FA MG MG . D MG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6OPC 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 4 ADP A 1 901 901 ADP ADP . 
J 5 BEF A 1 902 902 BEF BEF . 
K 6 MG A 1 903 903 MG MG . 
L 4 ADP A 1 904 951 ADP ADP . 
M 5 BEF A 1 905 952 BEF BEF . 
N 6 MG A 1 906 953 MG MG . 
O 4 ADP B 1 901 901 ADP ADP . 
P 6 MG B 1 902 903 MG MG . 
Q 4 ADP B 1 903 951 ADP ADP . 
R 5 BEF B 1 904 952 BEF BEF . 
S 6 MG B 1 905 953 MG MG . 
T 5 BEF C 1 901 902 BEF BEF . 
U 4 ADP C 1 902 901 ADP ADP . 
V 5 BEF C 1 903 902 BEF BEF . 
W 6 MG C 1 904 903 MG MG . 
X 4 ADP C 1 905 951 ADP ADP . 
Y 5 BEF C 1 906 952 BEF BEF . 
Z 6 MG C 1 907 953 MG MG . 
AA 4 ADP D 1 901 901 ADP ADP . 
BA 5 BEF D 1 902 902 BEF BEF . 
CA 6 MG D 1 903 903 MG MG . 
DA 4 ADP D 1 904 951 ADP ADP . 
EA 5 BEF D 1 905 952 BEF BEF . 
FA 6 MG D 1 906 953 MG MG . 
GA 4 ADP E 1 901 901 ADP ADP . 
HA 4 ADP E 1 902 951 ADP ADP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         Z 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               159.793 
_atom_site.Cartn_y               176.613 
_atom_site.Cartn_z               159.998 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.79 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           907 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    117 
_model_server_stats.query_time_ms           1041 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#