data_6OPG # _model_server_result.job_id ASEcy3EZGku8AHqiBoxDsA _model_server_result.datetime_utc '2024-11-22 05:39:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6opg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6OPG # _exptl.entry_id 6OPG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OPG _cell.length_a 41.85 _cell.length_b 77.15 _cell.length_c 152.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OPG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 178 A LEU 182 1_555 A N TPO 179 A TPO 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C TPO 179 A TPO 183 1_555 A N GLU 180 A GLU 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C GLU 180 A GLU 184 1_555 A N PTR 181 A PTR 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C PTR 181 A PTR 185 1_555 A N VAL 182 A VAL 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? metalc ? metalc1 A OD1 ASN 148 A ASN 152 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc2 A OD1 ASP 161 A ASP 165 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc3 A OD2 ASP 161 A ASP 165 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 B O3G ANP . A ANP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc5 B O2B ANP . A ANP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc6 B O2A ANP . A ANP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OPG _atom_sites.fract_transf_matrix[1][1] 0.023895 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 401 1 ANP ANP . C 3 MG A 1 402 1 MG MG . D 3 MG A 1 403 2 MG MG . E 4 HOH A 1 501 129 HOH HOH . E 4 HOH A 2 502 8 HOH HOH . E 4 HOH A 3 503 49 HOH HOH . E 4 HOH A 4 504 86 HOH HOH . E 4 HOH A 5 505 111 HOH HOH . E 4 HOH A 6 506 26 HOH HOH . E 4 HOH A 7 507 62 HOH HOH . E 4 HOH A 8 508 81 HOH HOH . E 4 HOH A 9 509 126 HOH HOH . E 4 HOH A 10 510 64 HOH HOH . E 4 HOH A 11 511 18 HOH HOH . E 4 HOH A 12 512 136 HOH HOH . E 4 HOH A 13 513 42 HOH HOH . E 4 HOH A 14 514 29 HOH HOH . E 4 HOH A 15 515 128 HOH HOH . E 4 HOH A 16 516 13 HOH HOH . E 4 HOH A 17 517 16 HOH HOH . E 4 HOH A 18 518 88 HOH HOH . E 4 HOH A 19 519 24 HOH HOH . E 4 HOH A 20 520 148 HOH HOH . E 4 HOH A 21 521 23 HOH HOH . E 4 HOH A 22 522 69 HOH HOH . E 4 HOH A 23 523 52 HOH HOH . E 4 HOH A 24 524 108 HOH HOH . E 4 HOH A 25 525 31 HOH HOH . E 4 HOH A 26 526 60 HOH HOH . E 4 HOH A 27 527 102 HOH HOH . E 4 HOH A 28 528 7 HOH HOH . E 4 HOH A 29 529 59 HOH HOH . E 4 HOH A 30 530 144 HOH HOH . E 4 HOH A 31 531 67 HOH HOH . E 4 HOH A 32 532 65 HOH HOH . E 4 HOH A 33 533 84 HOH HOH . E 4 HOH A 34 534 37 HOH HOH . E 4 HOH A 35 535 121 HOH HOH . E 4 HOH A 36 536 19 HOH HOH . E 4 HOH A 37 537 116 HOH HOH . E 4 HOH A 38 538 127 HOH HOH . E 4 HOH A 39 539 50 HOH HOH . E 4 HOH A 40 540 35 HOH HOH . E 4 HOH A 41 541 53 HOH HOH . E 4 HOH A 42 542 140 HOH HOH . E 4 HOH A 43 543 120 HOH HOH . E 4 HOH A 44 544 143 HOH HOH . E 4 HOH A 45 545 33 HOH HOH . E 4 HOH A 46 546 44 HOH HOH . E 4 HOH A 47 547 103 HOH HOH . E 4 HOH A 48 548 72 HOH HOH . E 4 HOH A 49 549 30 HOH HOH . E 4 HOH A 50 550 134 HOH HOH . E 4 HOH A 51 551 135 HOH HOH . E 4 HOH A 52 552 109 HOH HOH . E 4 HOH A 53 553 11 HOH HOH . E 4 HOH A 54 554 87 HOH HOH . E 4 HOH A 55 555 48 HOH HOH . E 4 HOH A 56 556 158 HOH HOH . E 4 HOH A 57 557 14 HOH HOH . E 4 HOH A 58 558 4 HOH HOH . E 4 HOH A 59 559 10 HOH HOH . E 4 HOH A 60 560 92 HOH HOH . E 4 HOH A 61 561 159 HOH HOH . E 4 HOH A 62 562 131 HOH HOH . E 4 HOH A 63 563 21 HOH HOH . E 4 HOH A 64 564 80 HOH HOH . E 4 HOH A 65 565 3 HOH HOH . E 4 HOH A 66 566 77 HOH HOH . E 4 HOH A 67 567 20 HOH HOH . E 4 HOH A 68 568 142 HOH HOH . E 4 HOH A 69 569 89 HOH HOH . E 4 HOH A 70 570 104 HOH HOH . E 4 HOH A 71 571 124 HOH HOH . E 4 HOH A 72 572 123 HOH HOH . E 4 HOH A 73 573 43 HOH HOH . E 4 HOH A 74 574 6 HOH HOH . E 4 HOH A 75 575 55 HOH HOH . E 4 HOH A 76 576 25 HOH HOH . E 4 HOH A 77 577 17 HOH HOH . E 4 HOH A 78 578 12 HOH HOH . E 4 HOH A 79 579 75 HOH HOH . E 4 HOH A 80 580 155 HOH HOH . E 4 HOH A 81 581 47 HOH HOH . E 4 HOH A 82 582 138 HOH HOH . E 4 HOH A 83 583 36 HOH HOH . E 4 HOH A 84 584 1 HOH HOH . E 4 HOH A 85 585 32 HOH HOH . E 4 HOH A 86 586 157 HOH HOH . E 4 HOH A 87 587 28 HOH HOH . E 4 HOH A 88 588 113 HOH HOH . E 4 HOH A 89 589 40 HOH HOH . E 4 HOH A 90 590 98 HOH HOH . E 4 HOH A 91 591 156 HOH HOH . E 4 HOH A 92 592 27 HOH HOH . E 4 HOH A 93 593 9 HOH HOH . E 4 HOH A 94 594 74 HOH HOH . E 4 HOH A 95 595 54 HOH HOH . E 4 HOH A 96 596 90 HOH HOH . E 4 HOH A 97 597 100 HOH HOH . E 4 HOH A 98 598 107 HOH HOH . E 4 HOH A 99 599 2 HOH HOH . E 4 HOH A 100 600 63 HOH HOH . E 4 HOH A 101 601 105 HOH HOH . E 4 HOH A 102 602 137 HOH HOH . E 4 HOH A 103 603 70 HOH HOH . E 4 HOH A 104 604 66 HOH HOH . E 4 HOH A 105 605 15 HOH HOH . E 4 HOH A 106 606 51 HOH HOH . E 4 HOH A 107 607 110 HOH HOH . E 4 HOH A 108 608 130 HOH HOH . E 4 HOH A 109 609 76 HOH HOH . E 4 HOH A 110 610 122 HOH HOH . E 4 HOH A 111 611 133 HOH HOH . E 4 HOH A 112 612 58 HOH HOH . E 4 HOH A 113 613 38 HOH HOH . E 4 HOH A 114 614 56 HOH HOH . E 4 HOH A 115 615 114 HOH HOH . E 4 HOH A 116 616 154 HOH HOH . E 4 HOH A 117 617 152 HOH HOH . E 4 HOH A 118 618 78 HOH HOH . E 4 HOH A 119 619 119 HOH HOH . E 4 HOH A 120 620 85 HOH HOH . E 4 HOH A 121 621 145 HOH HOH . E 4 HOH A 122 622 115 HOH HOH . E 4 HOH A 123 623 97 HOH HOH . E 4 HOH A 124 624 79 HOH HOH . E 4 HOH A 125 625 150 HOH HOH . E 4 HOH A 126 626 95 HOH HOH . E 4 HOH A 127 627 5 HOH HOH . E 4 HOH A 128 628 91 HOH HOH . E 4 HOH A 129 629 82 HOH HOH . E 4 HOH A 130 630 125 HOH HOH . E 4 HOH A 131 631 45 HOH HOH . E 4 HOH A 132 632 68 HOH HOH . E 4 HOH A 133 633 39 HOH HOH . E 4 HOH A 134 634 94 HOH HOH . E 4 HOH A 135 635 41 HOH HOH . E 4 HOH A 136 636 99 HOH HOH . E 4 HOH A 137 637 141 HOH HOH . E 4 HOH A 138 638 101 HOH HOH . E 4 HOH A 139 639 139 HOH HOH . E 4 HOH A 140 640 93 HOH HOH . E 4 HOH A 141 641 83 HOH HOH . E 4 HOH A 142 642 61 HOH HOH . E 4 HOH A 143 643 153 HOH HOH . E 4 HOH A 144 644 46 HOH HOH . E 4 HOH A 145 645 106 HOH HOH . E 4 HOH A 146 646 34 HOH HOH . E 4 HOH A 147 647 149 HOH HOH . E 4 HOH A 148 648 118 HOH HOH . E 4 HOH A 149 649 147 HOH HOH . E 4 HOH A 150 650 57 HOH HOH . E 4 HOH A 151 651 22 HOH HOH . E 4 HOH A 152 652 96 HOH HOH . E 4 HOH A 153 653 73 HOH HOH . E 4 HOH A 154 654 117 HOH HOH . E 4 HOH A 155 655 151 HOH HOH . E 4 HOH A 156 656 132 HOH HOH . E 4 HOH A 157 657 146 HOH HOH . E 4 HOH A 158 658 112 HOH HOH . E 4 HOH A 159 659 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.876 _atom_site.Cartn_y 16.544 _atom_site.Cartn_z 19.465 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 55.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 41 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 677 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #