data_6OQO # _model_server_result.job_id 0Llv02Ch0gtfA1nqKpgU4A _model_server_result.datetime_utc '2025-03-26 11:19:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6OQO # _exptl.entry_id 6OQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.566 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl]-5-fluoro-4-[(4R)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OQO _cell.length_a 103.335 _cell.length_b 103.335 _cell.length_c 59.851 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H31 F N8' _chem_comp.formula_weight 462.566 _chem_comp.id N1J _chem_comp.mon_nstd_flag . _chem_comp.name N-[5-(6-ethyl-2,6-diazaspiro[3.3]heptan-2-yl)pyridin-2-yl]-5-fluoro-4-[(4R)-4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl]pyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 N1J sing 237 n n C2 N3 N1J sing 238 n n C6 N3 N1J sing 239 n n C6 C5 N1J sing 240 n n C7 C5 N1J sing 241 n n C7 N8 N1J sing 242 n n N3 C4 N1J sing 243 n n C4 C5 N1J sing 244 n n C5 C9 N1J sing 245 n n C15 N14 N1J doub 246 n y C15 C10 N1J sing 247 n y N8 C10 N1J sing 248 n n N8 C9 N1J sing 249 n n N14 C13 N1J sing 250 n y C10 C11 N1J doub 251 n y C13 N16 N1J sing 252 n n C13 C12 N1J doub 253 n y N16 C17 N1J sing 254 n n C11 C12 N1J sing 255 n y C17 N18 N1J doub 256 n y C17 N22 N1J sing 257 n y N18 C19 N1J sing 258 n y N22 C21 N1J doub 259 n y C19 C20 N1J doub 260 n y C33 C28 N1J sing 261 n n C21 C20 N1J sing 262 n y C21 C23 N1J sing 263 n n C20 F34 N1J sing 264 n n C28 C29 N1J sing 265 n n C28 C27 N1J sing 266 n n C29 C30 N1J sing 267 n n C23 C27 N1J doub 268 n y C23 C24 N1J sing 269 n y C27 N26 N1J sing 270 n y C30 C31 N1J sing 271 n n C24 N25 N1J doub 272 n y N26 C32 N1J sing 273 n n N26 N25 N1J sing 274 n y C31 C32 N1J sing 275 n n C4 H1 N1J sing 276 n n C4 H2 N1J sing 277 n n C6 H3 N1J sing 278 n n C6 H4 N1J sing 279 n n C11 H5 N1J sing 280 n n C7 H6 N1J sing 281 n n C7 H7 N1J sing 282 n n C9 H8 N1J sing 283 n n C9 H9 N1J sing 284 n n C12 H10 N1J sing 285 n n C1 H12 N1J sing 286 n n C1 H13 N1J sing 287 n n C1 H14 N1J sing 288 n n C15 H15 N1J sing 289 n n C19 H16 N1J sing 290 n n C2 H17 N1J sing 291 n n C2 H18 N1J sing 292 n n C24 H19 N1J sing 293 n n C28 H20 N1J sing 294 n n C29 H21 N1J sing 295 n n C29 H22 N1J sing 296 n n C30 H23 N1J sing 297 n n C30 H24 N1J sing 298 n n C31 H25 N1J sing 299 n n C31 H26 N1J sing 300 n n C32 H27 N1J sing 301 n n C32 H28 N1J sing 302 n n C33 H29 N1J sing 303 n n C33 H30 N1J sing 304 n n C33 H31 N1J sing 305 n n N16 H32 N1J sing 306 n n # _atom_sites.entry_id 6OQO _atom_sites.fract_transf_matrix[1][1] 0.009677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 N1J A 1 401 1 N1J DRG . C 3 HOH A 1 501 43 HOH HOH . C 3 HOH A 2 502 92 HOH HOH . C 3 HOH A 3 503 90 HOH HOH . C 3 HOH A 4 504 84 HOH HOH . C 3 HOH A 5 505 17 HOH HOH . C 3 HOH A 6 506 8 HOH HOH . C 3 HOH A 7 507 38 HOH HOH . C 3 HOH A 8 508 7 HOH HOH . C 3 HOH A 9 509 93 HOH HOH . C 3 HOH A 10 510 63 HOH HOH . C 3 HOH A 11 511 67 HOH HOH . C 3 HOH A 12 512 49 HOH HOH . C 3 HOH A 13 513 71 HOH HOH . C 3 HOH A 14 514 76 HOH HOH . C 3 HOH A 15 515 51 HOH HOH . C 3 HOH A 16 516 94 HOH HOH . C 3 HOH A 17 517 58 HOH HOH . C 3 HOH A 18 518 45 HOH HOH . C 3 HOH A 19 519 9 HOH HOH . C 3 HOH A 20 520 52 HOH HOH . C 3 HOH A 21 521 12 HOH HOH . C 3 HOH A 22 522 14 HOH HOH . C 3 HOH A 23 523 13 HOH HOH . C 3 HOH A 24 524 74 HOH HOH . C 3 HOH A 25 525 59 HOH HOH . C 3 HOH A 26 526 6 HOH HOH . C 3 HOH A 27 527 3 HOH HOH . C 3 HOH A 28 528 35 HOH HOH . C 3 HOH A 29 529 85 HOH HOH . C 3 HOH A 30 530 15 HOH HOH . C 3 HOH A 31 531 1 HOH HOH . C 3 HOH A 32 532 61 HOH HOH . C 3 HOH A 33 533 31 HOH HOH . C 3 HOH A 34 534 30 HOH HOH . C 3 HOH A 35 535 23 HOH HOH . C 3 HOH A 36 536 54 HOH HOH . C 3 HOH A 37 537 26 HOH HOH . C 3 HOH A 38 538 69 HOH HOH . C 3 HOH A 39 539 25 HOH HOH . C 3 HOH A 40 540 53 HOH HOH . C 3 HOH A 41 541 4 HOH HOH . C 3 HOH A 42 542 36 HOH HOH . C 3 HOH A 43 543 62 HOH HOH . C 3 HOH A 44 544 39 HOH HOH . C 3 HOH A 45 545 21 HOH HOH . C 3 HOH A 46 546 2 HOH HOH . C 3 HOH A 47 547 47 HOH HOH . C 3 HOH A 48 548 33 HOH HOH . C 3 HOH A 49 549 18 HOH HOH . C 3 HOH A 50 550 5 HOH HOH . C 3 HOH A 51 551 82 HOH HOH . C 3 HOH A 52 552 34 HOH HOH . C 3 HOH A 53 553 64 HOH HOH . C 3 HOH A 54 554 73 HOH HOH . C 3 HOH A 55 555 10 HOH HOH . C 3 HOH A 56 556 22 HOH HOH . C 3 HOH A 57 557 16 HOH HOH . C 3 HOH A 58 558 19 HOH HOH . C 3 HOH A 59 559 88 HOH HOH . C 3 HOH A 60 560 80 HOH HOH . C 3 HOH A 61 561 32 HOH HOH . C 3 HOH A 62 562 79 HOH HOH . C 3 HOH A 63 563 56 HOH HOH . C 3 HOH A 64 564 66 HOH HOH . C 3 HOH A 65 565 27 HOH HOH . C 3 HOH A 66 566 83 HOH HOH . C 3 HOH A 67 567 37 HOH HOH . C 3 HOH A 68 568 77 HOH HOH . C 3 HOH A 69 569 46 HOH HOH . C 3 HOH A 70 570 75 HOH HOH . C 3 HOH A 71 571 24 HOH HOH . C 3 HOH A 72 572 81 HOH HOH . C 3 HOH A 73 573 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 N1J . . . B 2 20.612 41.842 -13.581 1 63.72 ? C4 N1J 401 A 1 HETATM 2 C C5 N1J . . . B 2 20.265 40.381 -13.321 1 75.29 ? C5 N1J 401 A 1 HETATM 3 C C6 N1J . . . B 2 18.893 40.687 -13.908 1 63.07 ? C6 N1J 401 A 1 HETATM 4 C C11 N1J . . . B 2 21.487 37.192 -10.85 1 63.35 ? C11 N1J 401 A 1 HETATM 5 C C7 N1J . . . B 2 21.115 39.237 -13.864 1 82.26 ? C7 N1J 401 A 1 HETATM 6 C C9 N1J . . . B 2 20.434 39.73 -11.947 1 83.76 ? C9 N1J 401 A 1 HETATM 7 C C10 N1J . . . B 2 21.53 37.605 -12.183 1 75.16 ? C10 N1J 401 A 1 HETATM 8 C C12 N1J . . . B 2 22.472 36.332 -10.383 1 58.57 ? C12 N1J 401 A 1 HETATM 9 C C13 N1J . . . B 2 23.473 35.906 -11.254 1 61.89 ? C13 N1J 401 A 1 HETATM 10 N N3 N1J . . . B 2 19.186 42.133 -13.838 1 67.46 ? N3 N1J 401 A 1 HETATM 11 C C1 N1J . . . B 2 17.551 42.669 -15.595 1 67.88 ? C1 N1J 401 A 1 HETATM 12 C C15 N1J . . . B 2 22.553 37.136 -12.991 1 68.46 ? C15 N1J 401 A 1 HETATM 13 C C17 N1J . . . B 2 24.955 34.743 -9.583 1 55.79 ? C17 N1J 401 A 1 HETATM 14 C C19 N1J . . . B 2 26.137 33.256 -8.287 1 53.79 ? C19 N1J 401 A 1 HETATM 15 C C2 N1J . . . B 2 19.013 42.768 -15.154 1 72.21 ? C2 N1J 401 A 1 HETATM 16 C C20 N1J . . . B 2 25.912 34.04 -7.171 1 54.62 ? C20 N1J 401 A 1 HETATM 17 C C21 N1J . . . B 2 25.164 35.227 -7.312 1 50.45 ? C21 N1J 401 A 1 HETATM 18 C C23 N1J . . . B 2 24.891 36.112 -6.132 1 48.95 ? C23 N1J 401 A 1 HETATM 19 C C24 N1J . . . B 2 25.478 35.951 -4.857 1 50.01 ? C24 N1J 401 A 1 HETATM 20 C C27 N1J . . . B 2 24.065 37.213 -6.041 1 48.93 ? C27 N1J 401 A 1 HETATM 21 C C28 N1J . . . B 2 23.205 37.799 -7.146 1 43.96 ? C28 N1J 401 A 1 HETATM 22 C C29 N1J . . . B 2 21.74 37.904 -6.7 1 62.98 ? C29 N1J 401 A 1 HETATM 23 C C30 N1J . . . B 2 21.536 39.077 -5.744 1 55.52 ? C30 N1J 401 A 1 HETATM 24 C C31 N1J . . . B 2 21.933 38.668 -4.328 1 55.59 ? C31 N1J 401 A 1 HETATM 25 C C32 N1J . . . B 2 23.448 38.84 -4.188 1 47.77 ? C32 N1J 401 A 1 HETATM 26 C C33 N1J . . . B 2 23.727 39.168 -7.599 1 43.58 ? C33 N1J 401 A 1 HETATM 27 F F34 N1J . . . B 2 26.417 33.625 -5.989 1 55.59 ? F34 N1J 401 A 1 HETATM 28 N N14 N1J . . . B 2 23.472 36.321 -12.511 1 71.9 ? N14 N1J 401 A 1 HETATM 29 N N16 N1J . . . B 2 24.504 35.037 -10.869 1 53.29 ? N16 N1J 401 A 1 HETATM 30 N N18 N1J . . . B 2 25.657 33.63 -9.456 1 58.43 ? N18 N1J 401 A 1 HETATM 31 N N22 N1J . . . B 2 24.718 35.527 -8.539 1 55.25 ? N22 N1J 401 A 1 HETATM 32 N N25 N1J . . . B 2 25.035 36.879 -4.06 1 47.4 ? N25 N1J 401 A 1 HETATM 33 N N26 N1J . . . B 2 24.145 37.685 -4.771 1 54.44 ? N26 N1J 401 A 1 HETATM 34 N N8 N1J . . . B 2 20.564 38.471 -12.719 1 83.79 ? N8 N1J 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #