data_6OQR # _model_server_result.job_id F7L4W9k7z9ovS-CeBSeJrw _model_server_result.datetime_utc '2024-11-24 03:18:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GA","auth_seq_id":501}' # _entry.id 6OQR # _exptl.entry_id 6OQR _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 94.971 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OQR _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 22-meric _pdbx_struct_assembly.oligomeric_count 22 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id GA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OG1 THR 176 C THR 176 1_555 X MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc2 W O2G ATP . C ATP 600 1_555 X MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc3 W O2B ATP . C ATP 600 1_555 X MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc4 C OG1 THR 176 B THR 176 1_555 Z MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 Y O2G ATP . B ATP 600 1_555 Z MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc6 Y O2B ATP . B ATP 600 1_555 Z MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc7 D OG1 THR 176 A THR 176 1_555 BA MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc8 AA O1G ATP . A ATP 600 1_555 BA MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc9 AA O2G ATP . A ATP 600 1_555 BA MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc10 AA O2B ATP . A ATP 600 1_555 BA MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.753 ? metalc ? metalc11 AA O3B ATP . A ATP 600 1_555 BA MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc12 H OG1 THR 168 F THR 156 1_555 DA MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc13 H OE1 GLU 193 F GLU 181 1_555 DA MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc14 CA O1B ADP . F ADP 500 1_555 DA MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc15 J OG1 THR 168 D THR 156 1_555 HA MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc16 FA O2B ADP . D ADP 500 1_555 HA MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc17 GA O3 PO4 . D PO4 501 1_555 HA MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 351 n n P O2 PO4 sing 352 n n P O3 PO4 sing 353 n n P O4 PO4 sing 354 n n # _atom_sites.entry_id 6OQR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code W 9 ATP C 1 600 600 ATP ATP . X 10 MG C 1 601 601 MG MG . Y 9 ATP B 1 600 600 ATP ATP . Z 10 MG B 1 601 601 MG MG . AA 9 ATP A 1 600 600 ATP ATP . BA 10 MG A 1 601 601 MG MG . CA 11 ADP F 1 500 500 ADP ADP . DA 10 MG F 1 501 501 MG MG . EA 11 ADP E 1 500 500 ADP ADP . FA 11 ADP D 1 500 500 ADP ADP . GA 12 PO4 D 1 501 501 PO4 PO4 . HA 10 MG D 1 502 502 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . GA 12 177.019 126.033 196.219 1 79.73 ? P PO4 501 D 1 HETATM 2 O O1 PO4 . . . GA 12 176.78 125.079 195.088 1 79.73 ? O1 PO4 501 D 1 HETATM 3 O O2 PO4 . . . GA 12 175.738 126.352 196.924 1 79.73 ? O2 PO4 501 D 1 HETATM 4 O O3 PO4 . . . GA 12 177.982 125.416 197.199 1 79.73 -1 O3 PO4 501 D 1 HETATM 5 O O4 PO4 . . . GA 12 177.567 127.308 195.653 1 79.73 ? O4 PO4 501 D 1 # _model_server_stats.io_time_ms 111 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 288 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #