data_6OS1 # _model_server_result.job_id a3x8QeOlyfgda6WsI2SojA _model_server_result.datetime_utc '2024-10-15 14:26:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6os1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1404}' # _entry.id 6OS1 # _exptl.entry_id 6OS1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OS1 _cell.length_a 60.67 _cell.length_b 101.99 _cell.length_c 227.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OS1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 18 1_555 A SG CYS 380 A CYS 1274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 108 A CYS 101 1_555 A SG CYS 187 A CYS 180 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 B SG CYS 22 D CYS 22 1_555 B SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 C C SAR 1 B SAR 1 1_555 C N ARG 2 B ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 314 n n C10 C9 OLC doub 315 n n C10 C11 OLC sing 316 n n C9 C8 OLC sing 317 n n C17 C16 OLC sing 318 z n C11 C12 OLC sing 319 n n C8 C7 OLC sing 320 n n C24 C22 OLC sing 321 n n C24 O25 OLC sing 322 n n C16 C15 OLC sing 323 n n C12 C13 OLC sing 324 n n C7 C6 OLC sing 325 n n C15 C14 OLC sing 326 n n C13 C14 OLC sing 327 n n C6 C5 OLC sing 328 n n C5 C4 OLC sing 329 n n C4 C3 OLC sing 330 n n C3 C2 OLC sing 331 n n C2 C1 OLC sing 332 n n C21 C22 OLC sing 333 n n C21 O20 OLC sing 334 n n C1 O19 OLC doub 335 n n C1 O20 OLC sing 336 n n C22 O23 OLC sing 337 n n C18 H18 OLC sing 338 n n C18 H18A OLC sing 339 n n C18 H18B OLC sing 340 n n C10 H10 OLC sing 341 n n C9 H9 OLC sing 342 n n C17 H17 OLC sing 343 n n C17 H17A OLC sing 344 n n C11 H11 OLC sing 345 n n C11 H11A OLC sing 346 n n C8 H8 OLC sing 347 n n C8 H8A OLC sing 348 n n C24 H24 OLC sing 349 n n C24 H24A OLC sing 350 n n C16 H16 OLC sing 351 n n C16 H16A OLC sing 352 n n C12 H12 OLC sing 353 n n C12 H12A OLC sing 354 n n C7 H7 OLC sing 355 n n C7 H7A OLC sing 356 n n C15 H15 OLC sing 357 n n C15 H15A OLC sing 358 n n C13 H13 OLC sing 359 n n C13 H13A OLC sing 360 n n C6 H6 OLC sing 361 n n C6 H6A OLC sing 362 n n C14 H14 OLC sing 363 n n C14 H14A OLC sing 364 n n C5 H5 OLC sing 365 n n C5 H5A OLC sing 366 n n C4 H4 OLC sing 367 n n C4 H4A OLC sing 368 n n C3 H3 OLC sing 369 n n C3 H3A OLC sing 370 n n C2 H2 OLC sing 371 n n C2 H2A OLC sing 372 n n C21 H21 OLC sing 373 n n C21 H21A OLC sing 374 n n C22 H22 OLC sing 375 n n O25 HO25 OLC sing 376 n n O23 HO23 OLC sing 377 n n # _atom_sites.entry_id 6OS1 _atom_sites.fract_transf_matrix[1][1] 0.016483 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004394 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 OLC A 1 1401 1 OLC OLC . E 4 OLC A 1 1402 2 OLC OLC . F 4 OLC A 1 1403 3 OLC OLC . G 4 OLC A 1 1404 4 OLC OLC . H 4 OLC A 1 1405 5 OLC OLC . I 4 OLC A 1 1406 6 OLC OLC . J 5 CLR A 1 1407 1 CLR CLR . K 6 HOH A 1 1501 17 HOH HOH . K 6 HOH A 2 1502 42 HOH HOH . K 6 HOH A 3 1503 14 HOH HOH . K 6 HOH A 4 1504 2 HOH HOH . K 6 HOH A 5 1505 9 HOH HOH . K 6 HOH A 6 1506 28 HOH HOH . K 6 HOH A 7 1507 38 HOH HOH . K 6 HOH A 8 1508 13 HOH HOH . K 6 HOH A 9 1509 33 HOH HOH . K 6 HOH A 10 1510 31 HOH HOH . K 6 HOH A 11 1511 34 HOH HOH . K 6 HOH A 12 1512 41 HOH HOH . K 6 HOH A 13 1513 24 HOH HOH . K 6 HOH A 14 1514 10 HOH HOH . K 6 HOH A 15 1515 21 HOH HOH . L 6 HOH D 1 201 25 HOH HOH . L 6 HOH D 2 202 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 OLC . . . G 4 -10.116 -38.091 -37.403 1 124.28 ? C24 OLC 1404 A 1 HETATM 2 C C21 OLC . . . G 4 -11.247 -36.965 -39.32 1 119.56 ? C21 OLC 1404 A 1 HETATM 3 C C1 OLC . . . G 4 -12.24 -35.783 -41.087 1 116.19 ? C1 OLC 1404 A 1 HETATM 4 C C22 OLC . . . G 4 -9.907 -37.202 -38.628 1 124.02 ? C22 OLC 1404 A 1 HETATM 5 O O19 OLC . . . G 4 -12.367 -34.688 -41.523 1 109.08 ? O19 OLC 1404 A 1 HETATM 6 O O25 OLC . . . G 4 -8.878 -38.357 -36.803 1 123.62 ? O25 OLC 1404 A 1 HETATM 7 O O23 OLC . . . G 4 -9.026 -37.832 -39.516 1 127.84 ? O23 OLC 1404 A 1 HETATM 8 O O20 OLC . . . G 4 -11.055 -36.144 -40.437 1 121.43 ? O20 OLC 1404 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #