data_6OTJ # _model_server_result.job_id oBRb0LU4j7z5tTM2JBB8lA _model_server_result.datetime_utc '2024-12-26 23:49:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6otj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6OTJ # _exptl.entry_id 6OTJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 181.189 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description TYROSINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OTJ _cell.length_a 121.73 _cell.length_b 121.73 _cell.length_c 301.81 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OTJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,AB 1 1 B,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,BB 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 DA N N # _chem_comp.formula 'C9 H11 N O3' _chem_comp.formula_weight 181.189 _chem_comp.id TYR _chem_comp.mon_nstd_flag y _chem_comp.name TYROSINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TYR sing 347 n n N H TYR sing 348 n n N H2 TYR sing 349 n n CA C TYR sing 350 n n CA CB TYR sing 351 n n CA HA TYR sing 352 n n C O TYR doub 353 n n C OXT TYR sing 354 n n CB CG TYR sing 355 n n CB HB2 TYR sing 356 n n CB HB3 TYR sing 357 n n CG CD1 TYR doub 358 n y CG CD2 TYR sing 359 n y CD1 CE1 TYR sing 360 n y CD1 HD1 TYR sing 361 n n CD2 CE2 TYR doub 362 n y CD2 HD2 TYR sing 363 n n CE1 CZ TYR doub 364 n y CE1 HE1 TYR sing 365 n n CE2 CZ TYR sing 366 n y CE2 HE2 TYR sing 367 n n CZ OH TYR sing 368 n n OH HH TYR sing 369 n n OXT HXT TYR sing 370 n n # _atom_sites.entry_id 6OTJ _atom_sites.fract_transf_matrix[1][1] 0.008215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TYR A 1 501 501 TYR TYR . D 3 SO4 A 1 502 601 SO4 SO4 . E 3 SO4 A 1 503 701 SO4 SO4 . F 3 SO4 A 1 504 801 SO4 SO4 . G 4 EDO A 1 505 901 EDO EDO . H 3 SO4 A 1 506 1101 SO4 SO4 . I 3 SO4 A 1 507 1201 SO4 SO4 . J 3 SO4 A 1 508 1301 SO4 SO4 . K 3 SO4 A 1 509 1401 SO4 SO4 . L 3 SO4 A 1 510 1501 SO4 SO4 . M 4 EDO A 1 511 1601 EDO EDO . N 3 SO4 A 1 512 1701 SO4 SO4 . O 3 SO4 A 1 513 1801 SO4 SO4 . P 3 SO4 A 1 514 2101 SO4 SO4 . Q 4 EDO A 1 515 2201 EDO EDO . R 4 EDO A 1 516 2301 EDO EDO . S 4 EDO A 1 517 2401 EDO EDO . T 4 EDO A 1 518 2501 EDO EDO . U 4 EDO A 1 519 2601 EDO EDO . V 3 SO4 A 1 520 2701 SO4 SO4 . W 3 SO4 A 1 521 2801 SO4 SO4 . X 4 EDO A 1 522 2901 EDO EDO . Y 3 SO4 A 1 523 3001 SO4 SO4 . Z 3 SO4 A 1 524 3101 SO4 SO4 . AA 4 EDO A 1 525 3201 EDO EDO . BA 3 SO4 A 1 526 3401 SO4 SO4 . CA 3 SO4 A 1 527 3501 SO4 SO4 . DA 2 TYR B 1 501 501 TYR TYR . EA 3 SO4 B 1 502 601 SO4 SO4 . FA 4 EDO B 1 503 701 EDO EDO . GA 4 EDO B 1 504 801 EDO EDO . HA 3 SO4 B 1 505 901 SO4 SO4 . IA 3 SO4 B 1 506 1001 SO4 SO4 . JA 4 EDO B 1 507 1101 EDO EDO . KA 3 SO4 B 1 508 1201 SO4 SO4 . LA 4 EDO B 1 509 1301 EDO EDO . MA 3 SO4 B 1 510 1401 SO4 SO4 . NA 4 EDO B 1 511 1501 EDO EDO . OA 3 SO4 B 1 512 1701 SO4 SO4 . PA 4 EDO B 1 513 1801 EDO EDO . QA 3 SO4 B 1 514 1901 SO4 SO4 . RA 4 EDO B 1 515 2001 EDO EDO . SA 3 SO4 B 1 516 2101 SO4 SO4 . TA 3 SO4 B 1 517 2201 SO4 SO4 . UA 4 EDO B 1 518 2301 EDO EDO . VA 4 EDO B 1 519 2401 EDO EDO . WA 4 EDO B 1 520 2501 EDO EDO . XA 4 EDO B 1 521 2601 EDO EDO . YA 3 SO4 B 1 522 2801 SO4 SO4 . ZA 4 EDO B 1 523 2901 EDO EDO . AB 5 HOH A 1 601 11 HOH HOH . AB 5 HOH A 2 602 12 HOH HOH . AB 5 HOH A 3 603 33 HOH HOH . AB 5 HOH A 4 604 56 HOH HOH . AB 5 HOH A 5 605 52 HOH HOH . AB 5 HOH A 6 606 19 HOH HOH . AB 5 HOH A 7 607 4 HOH HOH . AB 5 HOH A 8 608 42 HOH HOH . AB 5 HOH A 9 609 45 HOH HOH . AB 5 HOH A 10 610 9 HOH HOH . AB 5 HOH A 11 611 30 HOH HOH . AB 5 HOH A 12 612 26 HOH HOH . AB 5 HOH A 13 613 23 HOH HOH . AB 5 HOH A 14 614 51 HOH HOH . AB 5 HOH A 15 615 27 HOH HOH . AB 5 HOH A 16 616 15 HOH HOH . AB 5 HOH A 17 617 6 HOH HOH . AB 5 HOH A 18 618 24 HOH HOH . AB 5 HOH A 19 619 48 HOH HOH . AB 5 HOH A 20 620 37 HOH HOH . AB 5 HOH A 21 621 5 HOH HOH . AB 5 HOH A 22 622 57 HOH HOH . AB 5 HOH A 23 623 49 HOH HOH . AB 5 HOH A 24 624 47 HOH HOH . AB 5 HOH A 25 625 13 HOH HOH . AB 5 HOH A 26 626 29 HOH HOH . AB 5 HOH A 27 627 43 HOH HOH . AB 5 HOH A 28 628 54 HOH HOH . AB 5 HOH A 29 629 8 HOH HOH . AB 5 HOH A 30 630 28 HOH HOH . AB 5 HOH A 31 631 53 HOH HOH . AB 5 HOH A 32 632 32 HOH HOH . AB 5 HOH A 33 633 44 HOH HOH . AB 5 HOH A 34 634 58 HOH HOH . AB 5 HOH A 35 635 7 HOH HOH . AB 5 HOH A 36 636 55 HOH HOH . BB 5 HOH B 1 601 22 HOH HOH . BB 5 HOH B 2 602 46 HOH HOH . BB 5 HOH B 3 603 50 HOH HOH . BB 5 HOH B 4 604 17 HOH HOH . BB 5 HOH B 5 605 59 HOH HOH . BB 5 HOH B 6 606 61 HOH HOH . BB 5 HOH B 7 607 41 HOH HOH . BB 5 HOH B 8 608 60 HOH HOH . BB 5 HOH B 9 609 34 HOH HOH . BB 5 HOH B 10 610 35 HOH HOH . BB 5 HOH B 11 611 36 HOH HOH . BB 5 HOH B 12 612 38 HOH HOH . BB 5 HOH B 13 613 40 HOH HOH . BB 5 HOH B 14 614 25 HOH HOH . BB 5 HOH B 15 615 39 HOH HOH . BB 5 HOH B 16 616 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TYR . . . C 2 -52.852 -25.984 -18.828 1 72.2 ? N TYR 501 A 1 HETATM 2 C CA TYR . . . C 2 -52.855 -25.326 -17.528 1 73.02 ? CA TYR 501 A 1 HETATM 3 C C TYR . . . C 2 -53.818 -26.036 -16.582 1 78.64 ? C TYR 501 A 1 HETATM 4 O O TYR . . . C 2 -54.586 -26.901 -17.009 1 64.62 ? O TYR 501 A 1 HETATM 5 C CB TYR . . . C 2 -53.228 -23.849 -17.677 1 79.3 ? CB TYR 501 A 1 HETATM 6 C CG TYR . . . C 2 -52.321 -23.091 -18.622 1 76.57 ? CG TYR 501 A 1 HETATM 7 C CD1 TYR . . . C 2 -50.953 -23.323 -18.634 1 76.18 ? CD1 TYR 501 A 1 HETATM 8 C CD2 TYR . . . C 2 -52.835 -22.157 -19.512 1 70.85 ? CD2 TYR 501 A 1 HETATM 9 C CE1 TYR . . . C 2 -50.119 -22.636 -19.492 1 75.77 ? CE1 TYR 501 A 1 HETATM 10 C CE2 TYR . . . C 2 -52.009 -21.471 -20.38 1 70.62 ? CE2 TYR 501 A 1 HETATM 11 C CZ TYR . . . C 2 -50.651 -21.714 -20.367 1 79.41 ? CZ TYR 501 A 1 HETATM 12 O OH TYR . . . C 2 -49.813 -21.04 -21.229 1 75.9 ? OH TYR 501 A 1 HETATM 13 O OXT TYR . . . C 2 -53.848 -25.774 -15.376 1 87.24 ? OXT TYR 501 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #