data_6OTQ # _model_server_result.job_id bJXcsaXN_XEgJc17-woYzw _model_server_result.datetime_utc '2024-11-05 01:25:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6otq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6OTQ # _exptl.entry_id 6OTQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.26 _cell.angle_gamma 90 _cell.entry_id 6OTQ _cell.length_a 42.277 _cell.length_b 41.154 _cell.length_c 71.914 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OTQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 91 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc2 A NE2 HIS 93 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc3 A ND1 HIS 116 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C NAJ N7S . A N7S 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6OTQ _atom_sites.fract_transf_matrix[1][1] 0.023654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006013 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 N7S A 1 302 1 N7S 596 . D 4 DMS A 1 303 1 DMS DMS . E 4 DMS A 1 304 2 DMS DMS . F 5 HOH A 1 401 302 HOH HOH . F 5 HOH A 2 402 151 HOH HOH . F 5 HOH A 3 403 265 HOH HOH . F 5 HOH A 4 404 27 HOH HOH . F 5 HOH A 5 405 165 HOH HOH . F 5 HOH A 6 406 270 HOH HOH . F 5 HOH A 7 407 63 HOH HOH . F 5 HOH A 8 408 263 HOH HOH . F 5 HOH A 9 409 162 HOH HOH . F 5 HOH A 10 410 269 HOH HOH . F 5 HOH A 11 411 47 HOH HOH . F 5 HOH A 12 412 277 HOH HOH . F 5 HOH A 13 413 309 HOH HOH . F 5 HOH A 14 414 180 HOH HOH . F 5 HOH A 15 415 79 HOH HOH . F 5 HOH A 16 416 268 HOH HOH . F 5 HOH A 17 417 254 HOH HOH . F 5 HOH A 18 418 76 HOH HOH . F 5 HOH A 19 419 243 HOH HOH . F 5 HOH A 20 420 198 HOH HOH . F 5 HOH A 21 421 273 HOH HOH . F 5 HOH A 22 422 41 HOH HOH . F 5 HOH A 23 423 161 HOH HOH . F 5 HOH A 24 424 56 HOH HOH . F 5 HOH A 25 425 169 HOH HOH . F 5 HOH A 26 426 106 HOH HOH . F 5 HOH A 27 427 148 HOH HOH . F 5 HOH A 28 428 107 HOH HOH . F 5 HOH A 29 429 216 HOH HOH . F 5 HOH A 30 430 100 HOH HOH . F 5 HOH A 31 431 13 HOH HOH . F 5 HOH A 32 432 110 HOH HOH . F 5 HOH A 33 433 303 HOH HOH . F 5 HOH A 34 434 196 HOH HOH . F 5 HOH A 35 435 223 HOH HOH . F 5 HOH A 36 436 23 HOH HOH . F 5 HOH A 37 437 285 HOH HOH . F 5 HOH A 38 438 143 HOH HOH . F 5 HOH A 39 439 93 HOH HOH . F 5 HOH A 40 440 192 HOH HOH . F 5 HOH A 41 441 29 HOH HOH . F 5 HOH A 42 442 188 HOH HOH . F 5 HOH A 43 443 167 HOH HOH . F 5 HOH A 44 444 19 HOH HOH . F 5 HOH A 45 445 282 HOH HOH . F 5 HOH A 46 446 130 HOH HOH . F 5 HOH A 47 447 146 HOH HOH . F 5 HOH A 48 448 39 HOH HOH . F 5 HOH A 49 449 211 HOH HOH . F 5 HOH A 50 450 9 HOH HOH . F 5 HOH A 51 451 138 HOH HOH . F 5 HOH A 52 452 183 HOH HOH . F 5 HOH A 53 453 28 HOH HOH . F 5 HOH A 54 454 133 HOH HOH . F 5 HOH A 55 455 238 HOH HOH . F 5 HOH A 56 456 17 HOH HOH . F 5 HOH A 57 457 8 HOH HOH . F 5 HOH A 58 458 48 HOH HOH . F 5 HOH A 59 459 156 HOH HOH . F 5 HOH A 60 460 119 HOH HOH . F 5 HOH A 61 461 31 HOH HOH . F 5 HOH A 62 462 132 HOH HOH . F 5 HOH A 63 463 61 HOH HOH . F 5 HOH A 64 464 304 HOH HOH . F 5 HOH A 65 465 54 HOH HOH . F 5 HOH A 66 466 32 HOH HOH . F 5 HOH A 67 467 38 HOH HOH . F 5 HOH A 68 468 5 HOH HOH . F 5 HOH A 69 469 81 HOH HOH . F 5 HOH A 70 470 120 HOH HOH . F 5 HOH A 71 471 21 HOH HOH . F 5 HOH A 72 472 91 HOH HOH . F 5 HOH A 73 473 187 HOH HOH . F 5 HOH A 74 474 125 HOH HOH . F 5 HOH A 75 475 44 HOH HOH . F 5 HOH A 76 476 40 HOH HOH . F 5 HOH A 77 477 203 HOH HOH . F 5 HOH A 78 478 159 HOH HOH . F 5 HOH A 79 479 3 HOH HOH . F 5 HOH A 80 480 86 HOH HOH . F 5 HOH A 81 481 111 HOH HOH . F 5 HOH A 82 482 178 HOH HOH . F 5 HOH A 83 483 75 HOH HOH . F 5 HOH A 84 484 116 HOH HOH . F 5 HOH A 85 485 323 HOH HOH . F 5 HOH A 86 486 82 HOH HOH . F 5 HOH A 87 487 33 HOH HOH . F 5 HOH A 88 488 118 HOH HOH . F 5 HOH A 89 489 131 HOH HOH . F 5 HOH A 90 490 57 HOH HOH . F 5 HOH A 91 491 87 HOH HOH . F 5 HOH A 92 492 257 HOH HOH . F 5 HOH A 93 493 36 HOH HOH . F 5 HOH A 94 494 158 HOH HOH . F 5 HOH A 95 495 34 HOH HOH . F 5 HOH A 96 496 123 HOH HOH . F 5 HOH A 97 497 4 HOH HOH . F 5 HOH A 98 498 96 HOH HOH . F 5 HOH A 99 499 163 HOH HOH . F 5 HOH A 100 500 6 HOH HOH . F 5 HOH A 101 501 166 HOH HOH . F 5 HOH A 102 502 114 HOH HOH . F 5 HOH A 103 503 201 HOH HOH . F 5 HOH A 104 504 261 HOH HOH . F 5 HOH A 105 505 55 HOH HOH . F 5 HOH A 106 506 72 HOH HOH . F 5 HOH A 107 507 171 HOH HOH . F 5 HOH A 108 508 18 HOH HOH . F 5 HOH A 109 509 14 HOH HOH . F 5 HOH A 110 510 108 HOH HOH . F 5 HOH A 111 511 53 HOH HOH . F 5 HOH A 112 512 313 HOH HOH . F 5 HOH A 113 513 1 HOH HOH . F 5 HOH A 114 514 15 HOH HOH . F 5 HOH A 115 515 60 HOH HOH . F 5 HOH A 116 516 299 HOH HOH . F 5 HOH A 117 517 236 HOH HOH . F 5 HOH A 118 518 153 HOH HOH . F 5 HOH A 119 519 152 HOH HOH . F 5 HOH A 120 520 2 HOH HOH . F 5 HOH A 121 521 199 HOH HOH . F 5 HOH A 122 522 45 HOH HOH . F 5 HOH A 123 523 194 HOH HOH . F 5 HOH A 124 524 142 HOH HOH . F 5 HOH A 125 525 16 HOH HOH . F 5 HOH A 126 526 122 HOH HOH . F 5 HOH A 127 527 69 HOH HOH . F 5 HOH A 128 528 149 HOH HOH . F 5 HOH A 129 529 30 HOH HOH . F 5 HOH A 130 530 117 HOH HOH . F 5 HOH A 131 531 103 HOH HOH . F 5 HOH A 132 532 67 HOH HOH . F 5 HOH A 133 533 319 HOH HOH . F 5 HOH A 134 534 88 HOH HOH . F 5 HOH A 135 535 244 HOH HOH . F 5 HOH A 136 536 144 HOH HOH . F 5 HOH A 137 537 145 HOH HOH . F 5 HOH A 138 538 74 HOH HOH . F 5 HOH A 139 539 22 HOH HOH . F 5 HOH A 140 540 51 HOH HOH . F 5 HOH A 141 541 226 HOH HOH . F 5 HOH A 142 542 300 HOH HOH . F 5 HOH A 143 543 62 HOH HOH . F 5 HOH A 144 545 181 HOH HOH . F 5 HOH A 145 546 115 HOH HOH . F 5 HOH A 146 547 281 HOH HOH . F 5 HOH A 147 548 155 HOH HOH . F 5 HOH A 148 549 136 HOH HOH . F 5 HOH A 149 550 7 HOH HOH . F 5 HOH A 150 551 173 HOH HOH . F 5 HOH A 151 552 264 HOH HOH . F 5 HOH A 152 553 70 HOH HOH . F 5 HOH A 153 554 314 HOH HOH . F 5 HOH A 154 555 141 HOH HOH . F 5 HOH A 155 556 321 HOH HOH . F 5 HOH A 156 557 170 HOH HOH . F 5 HOH A 157 558 73 HOH HOH . F 5 HOH A 158 559 64 HOH HOH . F 5 HOH A 159 560 80 HOH HOH . F 5 HOH A 160 561 177 HOH HOH . F 5 HOH A 161 562 176 HOH HOH . F 5 HOH A 162 563 43 HOH HOH . F 5 HOH A 163 564 10 HOH HOH . F 5 HOH A 164 565 231 HOH HOH . F 5 HOH A 165 566 218 HOH HOH . F 5 HOH A 166 567 240 HOH HOH . F 5 HOH A 167 568 12 HOH HOH . F 5 HOH A 168 569 128 HOH HOH . F 5 HOH A 169 570 139 HOH HOH . F 5 HOH A 170 571 147 HOH HOH . F 5 HOH A 171 572 26 HOH HOH . F 5 HOH A 172 573 20 HOH HOH . F 5 HOH A 173 574 279 HOH HOH . F 5 HOH A 174 575 207 HOH HOH . F 5 HOH A 175 576 112 HOH HOH . F 5 HOH A 176 577 212 HOH HOH . F 5 HOH A 177 578 291 HOH HOH . F 5 HOH A 178 579 306 HOH HOH . F 5 HOH A 179 580 113 HOH HOH . F 5 HOH A 180 581 11 HOH HOH . F 5 HOH A 181 582 78 HOH HOH . F 5 HOH A 182 583 307 HOH HOH . F 5 HOH A 183 584 154 HOH HOH . F 5 HOH A 184 585 68 HOH HOH . F 5 HOH A 185 586 213 HOH HOH . F 5 HOH A 186 587 220 HOH HOH . F 5 HOH A 187 588 222 HOH HOH . F 5 HOH A 188 589 208 HOH HOH . F 5 HOH A 189 590 301 HOH HOH . F 5 HOH A 190 591 35 HOH HOH . F 5 HOH A 191 592 164 HOH HOH . F 5 HOH A 192 593 37 HOH HOH . F 5 HOH A 193 594 174 HOH HOH . F 5 HOH A 194 595 127 HOH HOH . F 5 HOH A 195 596 104 HOH HOH . F 5 HOH A 196 597 25 HOH HOH . F 5 HOH A 197 598 182 HOH HOH . F 5 HOH A 198 599 157 HOH HOH . F 5 HOH A 199 600 296 HOH HOH . F 5 HOH A 200 601 109 HOH HOH . F 5 HOH A 201 603 46 HOH HOH . F 5 HOH A 202 604 214 HOH HOH . F 5 HOH A 203 605 49 HOH HOH . F 5 HOH A 204 606 205 HOH HOH . F 5 HOH A 205 607 320 HOH HOH . F 5 HOH A 206 608 24 HOH HOH . F 5 HOH A 207 609 221 HOH HOH . F 5 HOH A 208 610 255 HOH HOH . F 5 HOH A 209 611 126 HOH HOH . F 5 HOH A 210 612 308 HOH HOH . F 5 HOH A 211 613 209 HOH HOH . F 5 HOH A 212 614 197 HOH HOH . F 5 HOH A 213 615 293 HOH HOH . F 5 HOH A 214 616 271 HOH HOH . F 5 HOH A 215 617 52 HOH HOH . F 5 HOH A 216 618 42 HOH HOH . F 5 HOH A 217 619 90 HOH HOH . F 5 HOH A 218 620 65 HOH HOH . F 5 HOH A 219 621 248 HOH HOH . F 5 HOH A 220 622 246 HOH HOH . F 5 HOH A 221 623 224 HOH HOH . F 5 HOH A 222 624 217 HOH HOH . F 5 HOH A 223 625 71 HOH HOH . F 5 HOH A 224 626 235 HOH HOH . F 5 HOH A 225 627 298 HOH HOH . F 5 HOH A 226 628 275 HOH HOH . F 5 HOH A 227 629 160 HOH HOH . F 5 HOH A 228 630 59 HOH HOH . F 5 HOH A 229 631 259 HOH HOH . F 5 HOH A 230 632 168 HOH HOH . F 5 HOH A 231 633 186 HOH HOH . F 5 HOH A 232 634 239 HOH HOH . F 5 HOH A 233 635 83 HOH HOH . F 5 HOH A 234 636 85 HOH HOH . F 5 HOH A 235 637 305 HOH HOH . F 5 HOH A 236 638 312 HOH HOH . F 5 HOH A 237 639 289 HOH HOH . F 5 HOH A 238 640 260 HOH HOH . F 5 HOH A 239 641 150 HOH HOH . F 5 HOH A 240 642 179 HOH HOH . F 5 HOH A 241 643 229 HOH HOH . F 5 HOH A 242 644 234 HOH HOH . F 5 HOH A 243 645 315 HOH HOH . F 5 HOH A 244 646 66 HOH HOH . F 5 HOH A 245 647 310 HOH HOH . F 5 HOH A 246 648 134 HOH HOH . F 5 HOH A 247 649 232 HOH HOH . F 5 HOH A 248 650 94 HOH HOH . F 5 HOH A 249 651 172 HOH HOH . F 5 HOH A 250 652 256 HOH HOH . F 5 HOH A 251 653 288 HOH HOH . F 5 HOH A 252 654 225 HOH HOH . F 5 HOH A 253 655 233 HOH HOH . F 5 HOH A 254 656 241 HOH HOH . F 5 HOH A 255 657 292 HOH HOH . F 5 HOH A 256 658 77 HOH HOH . F 5 HOH A 257 659 121 HOH HOH . F 5 HOH A 258 660 316 HOH HOH . F 5 HOH A 259 661 290 HOH HOH . F 5 HOH A 260 662 295 HOH HOH . F 5 HOH A 261 663 284 HOH HOH . F 5 HOH A 262 664 297 HOH HOH . F 5 HOH A 263 665 195 HOH HOH . F 5 HOH A 264 666 210 HOH HOH . F 5 HOH A 265 667 124 HOH HOH . F 5 HOH A 266 668 251 HOH HOH . F 5 HOH A 267 669 185 HOH HOH . F 5 HOH A 268 670 318 HOH HOH . F 5 HOH A 269 671 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 4 -6.344 7.605 10.963 1 65.53 ? S DMS 304 A 1 HETATM 2 O O DMS . . . E 4 -5.562 8.839 10.859 1 63.62 ? O DMS 304 A 1 HETATM 3 C C1 DMS . . . E 4 -6.816 6.678 9.486 1 66.3 ? C1 DMS 304 A 1 HETATM 4 C C2 DMS . . . E 4 -6.876 6.97 12.568 1 62.89 ? C2 DMS 304 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #