data_6OVW # _model_server_result.job_id kHxuJUytYDJboqCXBSmwxg _model_server_result.datetime_utc '2025-07-03 14:47:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ovw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6OVW # _exptl.entry_id 6OVW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6OVW _cell.length_a 139.214 _cell.length_b 139.214 _cell.length_c 139.214 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OVW _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6OVW _atom_sites.fract_transf_matrix[1][1] 0.007183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 401 GOL GOL . C 3 PO4 A 1 402 1 PO4 PO4 . D 3 PO4 A 1 403 2 PO4 PO4 . E 3 PO4 A 1 404 3 PO4 PO4 . F 4 HOH A 1 501 61 HOH HOH . F 4 HOH A 2 502 246 HOH HOH . F 4 HOH A 3 503 101 HOH HOH . F 4 HOH A 4 504 263 HOH HOH . F 4 HOH A 5 505 151 HOH HOH . F 4 HOH A 6 506 122 HOH HOH . F 4 HOH A 7 507 261 HOH HOH . F 4 HOH A 8 508 116 HOH HOH . F 4 HOH A 9 509 133 HOH HOH . F 4 HOH A 10 510 5 HOH HOH . F 4 HOH A 11 511 197 HOH HOH . F 4 HOH A 12 512 124 HOH HOH . F 4 HOH A 13 513 82 HOH HOH . F 4 HOH A 14 514 213 HOH HOH . F 4 HOH A 15 515 148 HOH HOH . F 4 HOH A 16 516 185 HOH HOH . F 4 HOH A 17 517 48 HOH HOH . F 4 HOH A 18 518 93 HOH HOH . F 4 HOH A 19 519 102 HOH HOH . F 4 HOH A 20 520 254 HOH HOH . F 4 HOH A 21 521 177 HOH HOH . F 4 HOH A 22 522 155 HOH HOH . F 4 HOH A 23 523 104 HOH HOH . F 4 HOH A 24 524 44 HOH HOH . F 4 HOH A 25 525 229 HOH HOH . F 4 HOH A 26 526 56 HOH HOH . F 4 HOH A 27 527 69 HOH HOH . F 4 HOH A 28 528 57 HOH HOH . F 4 HOH A 29 529 13 HOH HOH . F 4 HOH A 30 530 238 HOH HOH . F 4 HOH A 31 531 138 HOH HOH . F 4 HOH A 32 532 217 HOH HOH . F 4 HOH A 33 533 107 HOH HOH . F 4 HOH A 34 534 95 HOH HOH . F 4 HOH A 35 535 142 HOH HOH . F 4 HOH A 36 536 65 HOH HOH . F 4 HOH A 37 537 228 HOH HOH . F 4 HOH A 38 538 98 HOH HOH . F 4 HOH A 39 539 33 HOH HOH . F 4 HOH A 40 540 18 HOH HOH . F 4 HOH A 41 541 108 HOH HOH . F 4 HOH A 42 542 35 HOH HOH . F 4 HOH A 43 543 14 HOH HOH . F 4 HOH A 44 544 131 HOH HOH . F 4 HOH A 45 545 111 HOH HOH . F 4 HOH A 46 546 73 HOH HOH . F 4 HOH A 47 547 20 HOH HOH . F 4 HOH A 48 548 16 HOH HOH . F 4 HOH A 49 549 186 HOH HOH . F 4 HOH A 50 550 9 HOH HOH . F 4 HOH A 51 551 249 HOH HOH . F 4 HOH A 52 552 41 HOH HOH . F 4 HOH A 53 553 80 HOH HOH . F 4 HOH A 54 554 21 HOH HOH . F 4 HOH A 55 555 46 HOH HOH . F 4 HOH A 56 556 208 HOH HOH . F 4 HOH A 57 557 17 HOH HOH . F 4 HOH A 58 558 144 HOH HOH . F 4 HOH A 59 559 63 HOH HOH . F 4 HOH A 60 560 54 HOH HOH . F 4 HOH A 61 561 7 HOH HOH . F 4 HOH A 62 562 42 HOH HOH . F 4 HOH A 63 563 6 HOH HOH . F 4 HOH A 64 564 163 HOH HOH . F 4 HOH A 65 565 79 HOH HOH . F 4 HOH A 66 566 99 HOH HOH . F 4 HOH A 67 567 51 HOH HOH . F 4 HOH A 68 568 173 HOH HOH . F 4 HOH A 69 569 231 HOH HOH . F 4 HOH A 70 570 15 HOH HOH . F 4 HOH A 71 571 236 HOH HOH . F 4 HOH A 72 572 165 HOH HOH . F 4 HOH A 73 573 68 HOH HOH . F 4 HOH A 74 574 26 HOH HOH . F 4 HOH A 75 575 256 HOH HOH . F 4 HOH A 76 576 134 HOH HOH . F 4 HOH A 77 577 121 HOH HOH . F 4 HOH A 78 578 169 HOH HOH . F 4 HOH A 79 579 84 HOH HOH . F 4 HOH A 80 580 204 HOH HOH . F 4 HOH A 81 581 27 HOH HOH . F 4 HOH A 82 582 19 HOH HOH . F 4 HOH A 83 583 36 HOH HOH . F 4 HOH A 84 584 39 HOH HOH . F 4 HOH A 85 585 178 HOH HOH . F 4 HOH A 86 586 22 HOH HOH . F 4 HOH A 87 587 45 HOH HOH . F 4 HOH A 88 588 167 HOH HOH . F 4 HOH A 89 589 100 HOH HOH . F 4 HOH A 90 590 1 HOH HOH . F 4 HOH A 91 591 3 HOH HOH . F 4 HOH A 92 592 59 HOH HOH . F 4 HOH A 93 593 239 HOH HOH . F 4 HOH A 94 594 145 HOH HOH . F 4 HOH A 95 595 130 HOH HOH . F 4 HOH A 96 596 150 HOH HOH . F 4 HOH A 97 597 275 HOH HOH . F 4 HOH A 98 598 24 HOH HOH . F 4 HOH A 99 599 70 HOH HOH . F 4 HOH A 100 600 120 HOH HOH . F 4 HOH A 101 601 137 HOH HOH . F 4 HOH A 102 602 12 HOH HOH . F 4 HOH A 103 603 135 HOH HOH . F 4 HOH A 104 604 25 HOH HOH . F 4 HOH A 105 605 147 HOH HOH . F 4 HOH A 106 606 94 HOH HOH . F 4 HOH A 107 607 259 HOH HOH . F 4 HOH A 108 608 149 HOH HOH . F 4 HOH A 109 609 123 HOH HOH . F 4 HOH A 110 610 152 HOH HOH . F 4 HOH A 111 611 28 HOH HOH . F 4 HOH A 112 612 264 HOH HOH . F 4 HOH A 113 613 37 HOH HOH . F 4 HOH A 114 614 188 HOH HOH . F 4 HOH A 115 615 114 HOH HOH . F 4 HOH A 116 616 106 HOH HOH . F 4 HOH A 117 617 220 HOH HOH . F 4 HOH A 118 618 139 HOH HOH . F 4 HOH A 119 619 112 HOH HOH . F 4 HOH A 120 620 50 HOH HOH . F 4 HOH A 121 621 180 HOH HOH . F 4 HOH A 122 622 251 HOH HOH . F 4 HOH A 123 623 92 HOH HOH . F 4 HOH A 124 624 109 HOH HOH . F 4 HOH A 125 625 128 HOH HOH . F 4 HOH A 126 626 29 HOH HOH . F 4 HOH A 127 627 143 HOH HOH . F 4 HOH A 128 628 55 HOH HOH . F 4 HOH A 129 629 89 HOH HOH . F 4 HOH A 130 630 115 HOH HOH . F 4 HOH A 131 631 60 HOH HOH . F 4 HOH A 132 632 181 HOH HOH . F 4 HOH A 133 633 242 HOH HOH . F 4 HOH A 134 634 132 HOH HOH . F 4 HOH A 135 635 232 HOH HOH . F 4 HOH A 136 636 83 HOH HOH . F 4 HOH A 137 637 153 HOH HOH . F 4 HOH A 138 638 202 HOH HOH . F 4 HOH A 139 639 38 HOH HOH . F 4 HOH A 140 640 32 HOH HOH . F 4 HOH A 141 641 265 HOH HOH . F 4 HOH A 142 642 88 HOH HOH . F 4 HOH A 143 643 91 HOH HOH . F 4 HOH A 144 644 252 HOH HOH . F 4 HOH A 145 645 127 HOH HOH . F 4 HOH A 146 646 230 HOH HOH . F 4 HOH A 147 647 113 HOH HOH . F 4 HOH A 148 648 34 HOH HOH . F 4 HOH A 149 649 58 HOH HOH . F 4 HOH A 150 650 77 HOH HOH . F 4 HOH A 151 651 85 HOH HOH . F 4 HOH A 152 652 260 HOH HOH . F 4 HOH A 153 653 224 HOH HOH . F 4 HOH A 154 654 4 HOH HOH . F 4 HOH A 155 655 274 HOH HOH . F 4 HOH A 156 656 166 HOH HOH . F 4 HOH A 157 657 31 HOH HOH . F 4 HOH A 158 658 62 HOH HOH . F 4 HOH A 159 659 262 HOH HOH . F 4 HOH A 160 660 49 HOH HOH . F 4 HOH A 161 661 136 HOH HOH . F 4 HOH A 162 662 47 HOH HOH . F 4 HOH A 163 663 2 HOH HOH . F 4 HOH A 164 664 237 HOH HOH . F 4 HOH A 165 665 40 HOH HOH . F 4 HOH A 166 666 218 HOH HOH . F 4 HOH A 167 667 75 HOH HOH . F 4 HOH A 168 668 78 HOH HOH . F 4 HOH A 169 669 216 HOH HOH . F 4 HOH A 170 670 64 HOH HOH . F 4 HOH A 171 671 71 HOH HOH . F 4 HOH A 172 672 203 HOH HOH . F 4 HOH A 173 673 8 HOH HOH . F 4 HOH A 174 674 43 HOH HOH . F 4 HOH A 175 675 214 HOH HOH . F 4 HOH A 176 676 212 HOH HOH . F 4 HOH A 177 677 250 HOH HOH . F 4 HOH A 178 678 210 HOH HOH . F 4 HOH A 179 679 161 HOH HOH . F 4 HOH A 180 680 74 HOH HOH . F 4 HOH A 181 681 160 HOH HOH . F 4 HOH A 182 682 96 HOH HOH . F 4 HOH A 183 683 81 HOH HOH . F 4 HOH A 184 684 72 HOH HOH . F 4 HOH A 185 685 141 HOH HOH . F 4 HOH A 186 686 129 HOH HOH . F 4 HOH A 187 687 170 HOH HOH . F 4 HOH A 188 688 194 HOH HOH . F 4 HOH A 189 689 174 HOH HOH . F 4 HOH A 190 690 66 HOH HOH . F 4 HOH A 191 691 245 HOH HOH . F 4 HOH A 192 692 67 HOH HOH . F 4 HOH A 193 693 191 HOH HOH . F 4 HOH A 194 694 76 HOH HOH . F 4 HOH A 195 695 200 HOH HOH . F 4 HOH A 196 696 241 HOH HOH . F 4 HOH A 197 697 243 HOH HOH . F 4 HOH A 198 698 266 HOH HOH . F 4 HOH A 199 699 195 HOH HOH . F 4 HOH A 200 700 10 HOH HOH . F 4 HOH A 201 701 184 HOH HOH . F 4 HOH A 202 702 30 HOH HOH . F 4 HOH A 203 703 86 HOH HOH . F 4 HOH A 204 704 164 HOH HOH . F 4 HOH A 205 705 52 HOH HOH . F 4 HOH A 206 706 234 HOH HOH . F 4 HOH A 207 707 90 HOH HOH . F 4 HOH A 208 708 244 HOH HOH . F 4 HOH A 209 709 53 HOH HOH . F 4 HOH A 210 710 105 HOH HOH . F 4 HOH A 211 711 189 HOH HOH . F 4 HOH A 212 712 221 HOH HOH . F 4 HOH A 213 713 182 HOH HOH . F 4 HOH A 214 714 248 HOH HOH . F 4 HOH A 215 715 270 HOH HOH . F 4 HOH A 216 716 175 HOH HOH . F 4 HOH A 217 717 171 HOH HOH . F 4 HOH A 218 718 192 HOH HOH . F 4 HOH A 219 719 11 HOH HOH . F 4 HOH A 220 720 215 HOH HOH . F 4 HOH A 221 721 227 HOH HOH . F 4 HOH A 222 722 156 HOH HOH . F 4 HOH A 223 723 193 HOH HOH . F 4 HOH A 224 724 23 HOH HOH . F 4 HOH A 225 725 119 HOH HOH . F 4 HOH A 226 726 257 HOH HOH . F 4 HOH A 227 727 253 HOH HOH . F 4 HOH A 228 728 140 HOH HOH . F 4 HOH A 229 729 269 HOH HOH . F 4 HOH A 230 730 226 HOH HOH . F 4 HOH A 231 731 172 HOH HOH . F 4 HOH A 232 732 219 HOH HOH . F 4 HOH A 233 733 118 HOH HOH . F 4 HOH A 234 734 146 HOH HOH . F 4 HOH A 235 735 157 HOH HOH . F 4 HOH A 236 736 125 HOH HOH . F 4 HOH A 237 737 187 HOH HOH . F 4 HOH A 238 738 179 HOH HOH . F 4 HOH A 239 739 201 HOH HOH . F 4 HOH A 240 740 87 HOH HOH . F 4 HOH A 241 741 273 HOH HOH . F 4 HOH A 242 742 103 HOH HOH . F 4 HOH A 243 743 271 HOH HOH . F 4 HOH A 244 744 272 HOH HOH . F 4 HOH A 245 745 97 HOH HOH . F 4 HOH A 246 746 268 HOH HOH . F 4 HOH A 247 747 267 HOH HOH . F 4 HOH A 248 748 154 HOH HOH . F 4 HOH A 249 749 223 HOH HOH . F 4 HOH A 250 750 225 HOH HOH . F 4 HOH A 251 751 258 HOH HOH . F 4 HOH A 252 752 211 HOH HOH . F 4 HOH A 253 753 183 HOH HOH . F 4 HOH A 254 754 235 HOH HOH . F 4 HOH A 255 755 199 HOH HOH . F 4 HOH A 256 756 209 HOH HOH . F 4 HOH A 257 757 168 HOH HOH . F 4 HOH A 258 758 233 HOH HOH . F 4 HOH A 259 759 158 HOH HOH . F 4 HOH A 260 760 205 HOH HOH . F 4 HOH A 261 761 207 HOH HOH . F 4 HOH A 262 762 240 HOH HOH . F 4 HOH A 263 763 196 HOH HOH . F 4 HOH A 264 764 247 HOH HOH . F 4 HOH A 265 765 206 HOH HOH . F 4 HOH A 266 766 117 HOH HOH . F 4 HOH A 267 767 222 HOH HOH . F 4 HOH A 268 768 159 HOH HOH . F 4 HOH A 269 769 255 HOH HOH . F 4 HOH A 270 770 110 HOH HOH . F 4 HOH A 271 771 162 HOH HOH . F 4 HOH A 272 772 190 HOH HOH . F 4 HOH A 273 773 126 HOH HOH . F 4 HOH A 274 774 198 HOH HOH . F 4 HOH A 275 775 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 37.094 84.234 57.368 1 10.42 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 36.747 83.162 56.618 1 40.59 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 36.084 84.901 57.854 1 29.66 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 35.558 84.122 58.773 1 51.78 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 36.729 86.147 58.455 1 42.38 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 36.096 87.31 57.945 1 47.79 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #