data_6OWY
#
_model_server_result.job_id            c7Wjz5_AAKpOPpg_otg0FQ 
_model_server_result.datetime_utc      '2024-12-12 14:49:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6owy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":212}' 
#
_entry.id    6OWY 
#
_exptl.entry_id    6OWY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6OWY 
_cell.length_a            42.84 
_cell.length_b            42.84 
_cell.length_c            257.63 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OWY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    'P 4w 2c' 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 N N N 
? 4 O N N 
? 4 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 9 A ASP 36 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc2 A OD2 ASP 9 A ASP 36 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? 
metalc ? metalc3 A OE1 GLU 17 A GLU 44 1_555 C ZN ZN . A ZN 201 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? 
metalc ? metalc4 A OE1 GLU 32 A GLU 59 1_555 H ZN ZN . A ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc5 A OE2 GLU 32 A GLU 59 1_555 H ZN ZN . A ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc6 A ND1 HIS 38 A HIS 65 1_555 J ZN ZN . A ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc7 A OD1 ASP 39 A ASP 66 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc8 A OD2 ASP 39 A ASP 66 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? 
metalc ? metalc9 A OD2 ASP 44 A ASP 71 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? 
metalc ? metalc10 A OD2 ASP 47 A ASP 74 1_555 E ZN ZN . A ZN 203 8_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc11 A OE1 GLU 59 A GLU 86 1_555 F ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc12 A OE2 GLU 93 A GLU 120 1_555 G ZN ZN . A ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? 
metalc ? metalc13 C ZN ZN . A ZN 201 1_555 T O HOH . A HOH 301 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
metalc ? metalc14 C ZN ZN . A ZN 201 5_545 B OE1 GLU 83 B GLU 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
metalc ? metalc15 C ZN ZN . A ZN 201 5_545 B OE2 GLU 83 B GLU 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc16 C ZN ZN . A ZN 201 1_555 U O HOH . B HOH 314 5_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc17 D ZN ZN . A ZN 202 1_565 B OD1 ASP 39 B ASP 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc18 D ZN ZN . A ZN 202 1_565 B OD2 ASP 39 B ASP 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
metalc ? metalc19 D ZN ZN . A ZN 202 1_555 U O HOH . B HOH 302 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? 
metalc ? metalc20 D ZN ZN . A ZN 202 1_555 U O HOH . B HOH 316 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc21 E ZN ZN . A ZN 203 1_555 T O HOH . A HOH 330 8_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc22 F ZN ZN . A ZN 204 1_555 O N1 IMD . A IMD 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc23 F ZN ZN . A ZN 204 8_555 B OE2 GLU 52 B GLU 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc24 F ZN ZN . A ZN 204 1_555 U O HOH . B HOH 319 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc25 G ZN ZN . A ZN 205 1_555 N N1 IMD . A IMD 212 1_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc26 G ZN ZN . A ZN 205 1_555 B ND1 HIS 38 B HIS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc27 H ZN ZN . A ZN 206 1_565 B OD2 ASP 44 B ASP 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc28 H ZN ZN . A ZN 206 1_555 U O HOH . B HOH 320 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? 
metalc ? metalc29 H ZN ZN . A ZN 206 1_555 U O HOH . B HOH 321 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc30 J ZN ZN . A ZN 208 1_555 B OE2 GLU 93 B GLU 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
metalc ? metalc31 J ZN ZN . A ZN 208 1_555 S N3 IMD . B IMD 203 1_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? 
metalc ? metalc32 B OD2 ASP 47 B ASP 74 1_555 Q ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
metalc ? metalc33 B OE2 GLU 60 B GLU 87 1_555 Q ZN ZN . B ZN 201 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc34 B NZ LYS 63 B LYS 90 1_555 Q ZN ZN . B ZN 201 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc35 Q ZN ZN . B ZN 201 1_555 U O HOH . B HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 160 n y 
N1 C5 IMD sing 161 n y 
N1 HN1 IMD sing 162 n n 
C2 N3 IMD doub 163 n y 
C2 H2 IMD sing 164 n n 
N3 C4 IMD sing 165 n y 
N3 HN3 IMD sing 166 n n 
C4 C5 IMD doub 167 n y 
C4 H4 IMD sing 168 n n 
C5 H5 IMD sing 169 n n 
#
_atom_sites.entry_id                     6OWY 
_atom_sites.fract_transf_matrix[1][1]    0.023343 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023343 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003882 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 201 1 ZN ZN . 
D 2 ZN A 1 202 2 ZN ZN . 
E 2 ZN A 1 203 3 ZN ZN . 
F 2 ZN A 1 204 4 ZN ZN . 
G 2 ZN A 1 205 5 ZN ZN . 
H 2 ZN A 1 206 6 ZN ZN . 
I 2 ZN A 1 207 8 ZN ZN . 
J 2 ZN A 1 208 9 ZN ZN . 
K 2 ZN A 1 209 10 ZN ZN . 
L 3 CL A 1 210 1 CL CL . 
M 3 CL A 1 211 2 CL CL . 
N 4 IMD A 1 212 1 IMD IMD . 
O 4 IMD A 1 213 2 IMD IMD . 
P 5 IOD A 1 214 1 IOD IOD . 
Q 2 ZN B 1 201 7 ZN ZN . 
R 2 ZN B 1 202 11 ZN ZN . 
S 4 IMD B 1 203 4 IMD IMD . 
T 6 HOH A 1 301 26 HOH HOH . 
T 6 HOH A 2 302 18 HOH HOH . 
T 6 HOH A 3 303 44 HOH HOH . 
T 6 HOH A 4 304 13 HOH HOH . 
T 6 HOH A 5 305 52 HOH HOH . 
T 6 HOH A 6 306 58 HOH HOH . 
T 6 HOH A 7 307 34 HOH HOH . 
T 6 HOH A 8 308 43 HOH HOH . 
T 6 HOH A 9 309 11 HOH HOH . 
T 6 HOH A 10 310 57 HOH HOH . 
T 6 HOH A 11 311 46 HOH HOH . 
T 6 HOH A 12 312 42 HOH HOH . 
T 6 HOH A 13 313 19 HOH HOH . 
T 6 HOH A 14 314 33 HOH HOH . 
T 6 HOH A 15 315 29 HOH HOH . 
T 6 HOH A 16 316 4 HOH HOH . 
T 6 HOH A 17 317 8 HOH HOH . 
T 6 HOH A 18 318 17 HOH HOH . 
T 6 HOH A 19 319 3 HOH HOH . 
T 6 HOH A 20 320 20 HOH HOH . 
T 6 HOH A 21 321 45 HOH HOH . 
T 6 HOH A 22 322 24 HOH HOH . 
T 6 HOH A 23 323 9 HOH HOH . 
T 6 HOH A 24 324 50 HOH HOH . 
T 6 HOH A 25 325 27 HOH HOH . 
T 6 HOH A 26 326 22 HOH HOH . 
T 6 HOH A 27 327 39 HOH HOH . 
T 6 HOH A 28 328 51 HOH HOH . 
T 6 HOH A 29 329 21 HOH HOH . 
T 6 HOH A 30 330 41 HOH HOH . 
T 6 HOH A 31 331 23 HOH HOH . 
T 6 HOH A 32 332 14 HOH HOH . 
T 6 HOH A 33 333 47 HOH HOH . 
T 6 HOH A 34 334 16 HOH HOH . 
T 6 HOH A 35 335 53 HOH HOH . 
U 6 HOH B 1 301 36 HOH HOH . 
U 6 HOH B 2 302 54 HOH HOH . 
U 6 HOH B 3 303 5 HOH HOH . 
U 6 HOH B 4 304 32 HOH HOH . 
U 6 HOH B 5 305 10 HOH HOH . 
U 6 HOH B 6 306 30 HOH HOH . 
U 6 HOH B 7 307 49 HOH HOH . 
U 6 HOH B 8 308 38 HOH HOH . 
U 6 HOH B 9 309 28 HOH HOH . 
U 6 HOH B 10 310 7 HOH HOH . 
U 6 HOH B 11 311 56 HOH HOH . 
U 6 HOH B 12 312 31 HOH HOH . 
U 6 HOH B 13 313 1 HOH HOH . 
U 6 HOH B 14 314 12 HOH HOH . 
U 6 HOH B 15 315 6 HOH HOH . 
U 6 HOH B 16 316 55 HOH HOH . 
U 6 HOH B 17 317 2 HOH HOH . 
U 6 HOH B 18 318 15 HOH HOH . 
U 6 HOH B 19 319 40 HOH HOH . 
U 6 HOH B 20 320 35 HOH HOH . 
U 6 HOH B 21 321 25 HOH HOH . 
U 6 HOH B 22 322 48 HOH HOH . 
U 6 HOH B 23 323 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . N 4 -1.704 -35.722 18.672 1 45.73 ? N1 IMD 212 A 1 
HETATM 2 C C2 IMD . . . N 4 -2.781 -35.363 17.917 1 44.11 ? C2 IMD 212 A 1 
HETATM 3 N N3 IMD . . . N 4 -3.455 -34.378 18.554 1 45.1 ? N3 IMD 212 A 1 
HETATM 4 C C4 IMD . . . N 4 -2.782 -34.074 19.684 1 45.57 ? C4 IMD 212 A 1 
HETATM 5 C C5 IMD . . . N 4 -1.692 -34.932 19.771 1 52.5 ? C5 IMD 212 A 1 
HETATM 6 H HN1 IMD . . . N 4 -1.055 -36.426 18.457 1 54.76 ? HN1 IMD 212 A 1 
HETATM 7 H H2 IMD . . . N 4 -3.027 -35.754 17.053 1 52.81 ? H2 IMD 212 A 1 
HETATM 8 H HN3 IMD . . . N 4 -4.286 -33.958 18.249 1 54 ? HN3 IMD 212 A 1 
HETATM 9 H H4 IMD . . . N 4 -3.02 -33.374 20.328 1 54.56 ? H4 IMD 212 A 1 
HETATM 10 H H5 IMD . . . N 4 -1.034 -34.96 20.496 1 62.88 ? H5 IMD 212 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           10 
#