data_6OYD
#
_model_server_result.job_id            E_EMWDTnH0pxECJD5zgDww 
_model_server_result.datetime_utc      '2024-11-25 05:49:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6oyd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
#
_entry.id    6OYD 
#
_exptl.entry_id    6OYD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              674.78 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl {(2S,3R)-1-(4-fluorophenyl)-3-hydroxy-4-[(2-methylpropyl)({2-[(propan-2-yl)amino]-1,3-benzoxazol-6-yl}sulfonyl)amino]butan-2-yl}carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6OYD 
_cell.length_a            62.825 
_cell.length_b            62.825 
_cell.length_c            82.28 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OYD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 27.426667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C33 H43 F N4 O8 S' 
_chem_comp.formula_weight    674.78 
_chem_comp.id                NKA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl {(2S,3R)-1-(4-fluorophenyl)-3-hydroxy-4-[(2-methylpropyl)({2-[(propan-2-yl)amino]-1,3-benzoxazol-6-yl}sulfonyl)amino]butan-2-yl}carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CBN CBG NKA sing 237 n n 
CBG NBF NKA sing 238 n n 
CBG CBT NKA sing 239 n n 
NBF CBD NKA sing 240 n n 
CBD NBE NKA doub 241 n y 
CBD OBC NKA sing 242 n y 
NBE CAZ NKA sing 243 n y 
OBC CAY NKA sing 244 n y 
CAZ CBA NKA doub 245 n y 
CAZ CAY NKA sing 246 n y 
CBA CBB NKA sing 247 n y 
CAY CAX NKA doub 248 n y 
CAX CAS NKA sing 249 n y 
CBB CAS NKA doub 250 n y 
CAS SAR NKA sing 251 n n 
SAR OAU NKA doub 252 n n 
SAR OAV NKA doub 253 n n 
SAR NAQ NKA sing 254 n n 
CBP NAQ NKA sing 255 n n 
CBP CBQ NKA sing 256 n n 
NAQ CAP NKA sing 257 n n 
CAP CAT NKA sing 258 n n 
CBR CBQ NKA sing 259 n n 
CBQ CBS NKA sing 260 n n 
CAT OBO NKA sing 261 n n 
CAT CAO NKA sing 262 n n 
CAW CAO NKA sing 263 n n 
CAW CBH NKA sing 264 n n 
CBI CBH NKA doub 265 n y 
CBI CBJ NKA sing 266 n y 
CAO NAN NKA sing 267 n n 
CBH CBM NKA sing 268 n y 
CBJ CBK NKA doub 269 n y 
CBM CBL NKA doub 270 n y 
CBK CBL NKA sing 271 n y 
CBK FBU NKA sing 272 n n 
NAN CAL NKA sing 273 n n 
OAM CAL NKA doub 274 n n 
CAL OAK NKA sing 275 n n 
OAK CAF NKA sing 276 n n 
CAF CAD NKA sing 277 n n 
CAF CAG NKA sing 278 n n 
CAC CAD NKA sing 279 n n 
CAC OAB NKA sing 280 n n 
CAD CAE NKA sing 281 n n 
CAG CAJ NKA sing 282 n n 
CAG CAH NKA sing 283 n n 
OAB CAA NKA sing 284 n n 
CAJ OAI NKA sing 285 n n 
CAE CAH NKA sing 286 n n 
CAE CAA NKA sing 287 n n 
CAA OAI NKA sing 288 n n 
CAE H1 NKA sing 289 n n 
CAH H2 NKA sing 290 n n 
CAH H3 NKA sing 291 n n 
CAG H4 NKA sing 292 n n 
CAJ H5 NKA sing 293 n n 
CAJ H6 NKA sing 294 n n 
CAA H7 NKA sing 295 n n 
CAC H8 NKA sing 296 n n 
CAC H9 NKA sing 297 n n 
CAD H10 NKA sing 298 n n 
CAF H11 NKA sing 299 n n 
NAN H12 NKA sing 300 n n 
CAO H13 NKA sing 301 n n 
CAW H14 NKA sing 302 n n 
CAW H15 NKA sing 303 n n 
CBI H16 NKA sing 304 n n 
CBJ H17 NKA sing 305 n n 
CBL H18 NKA sing 306 n n 
CBM H19 NKA sing 307 n n 
CAT H20 NKA sing 308 n n 
OBO H21 NKA sing 309 n n 
CAP H22 NKA sing 310 n n 
CAP H23 NKA sing 311 n n 
CBP H24 NKA sing 312 n n 
CBP H25 NKA sing 313 n n 
CBQ H26 NKA sing 314 n n 
CBS H27 NKA sing 315 n n 
CBS H28 NKA sing 316 n n 
CBS H29 NKA sing 317 n n 
CBR H30 NKA sing 318 n n 
CBR H31 NKA sing 319 n n 
CBR H32 NKA sing 320 n n 
CAX H33 NKA sing 321 n n 
CBB H34 NKA sing 322 n n 
CBA H35 NKA sing 323 n n 
NBF H36 NKA sing 324 n n 
CBG H37 NKA sing 325 n n 
CBT H38 NKA sing 326 n n 
CBT H39 NKA sing 327 n n 
CBT H40 NKA sing 328 n n 
CBN H41 NKA sing 329 n n 
CBN H42 NKA sing 330 n n 
CBN H43 NKA sing 331 n n 
#
_atom_sites.entry_id                     6OYD 
_atom_sites.fract_transf_matrix[1][1]    0.015917 
_atom_sites.fract_transf_matrix[1][2]    0.00919 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01838 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012154 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NKA A 1 101 1 NKA DRG . 
C 3 HOH A 1 201 2 HOH HOH . 
C 3 HOH A 2 202 10 HOH HOH . 
C 3 HOH A 3 203 27 HOH HOH . 
C 3 HOH A 4 204 28 HOH HOH . 
C 3 HOH A 5 205 9 HOH HOH . 
C 3 HOH A 6 206 4 HOH HOH . 
C 3 HOH A 7 207 21 HOH HOH . 
C 3 HOH A 8 208 29 HOH HOH . 
C 3 HOH A 9 209 17 HOH HOH . 
C 3 HOH A 10 210 11 HOH HOH . 
C 3 HOH A 11 211 1 HOH HOH . 
C 3 HOH A 12 212 26 HOH HOH . 
C 3 HOH A 13 213 12 HOH HOH . 
C 3 HOH A 14 214 23 HOH HOH . 
C 3 HOH A 15 215 5 HOH HOH . 
C 3 HOH A 16 216 13 HOH HOH . 
C 3 HOH A 17 217 8 HOH HOH . 
C 3 HOH A 18 218 31 HOH HOH . 
C 3 HOH A 19 219 20 HOH HOH . 
C 3 HOH A 20 220 7 HOH HOH . 
C 3 HOH A 21 221 18 HOH HOH . 
C 3 HOH A 22 222 6 HOH HOH . 
C 3 HOH A 23 223 19 HOH HOH . 
C 3 HOH A 24 224 14 HOH HOH . 
C 3 HOH A 25 225 3 HOH HOH . 
C 3 HOH A 26 226 15 HOH HOH . 
C 3 HOH A 27 227 25 HOH HOH . 
C 3 HOH A 28 228 16 HOH HOH . 
C 3 HOH A 29 229 30 HOH HOH . 
C 3 HOH A 30 230 22 HOH HOH . 
C 3 HOH A 31 231 32 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAE NKA . . . B 2 -6.285 -16.652 20.732 0.48 15.18 ? CAE NKA 101 A 1 
HETATM 2 C CAH NKA . . . B 2 -7.019 -15.378 20.838 0.48 14.82 ? CAH NKA 101 A 1 
HETATM 3 C CAG NKA . . . B 2 -8.14 -15.695 19.873 0.48 14.36 ? CAG NKA 101 A 1 
HETATM 4 C CAJ NKA . . . B 2 -8.995 -16.862 20.393 0.48 14.89 ? CAJ NKA 101 A 1 
HETATM 5 O OAI NKA . . . B 2 -8.458 -17.438 21.572 0.48 15.41 ? OAI NKA 101 A 1 
HETATM 6 C CAA NKA . . . B 2 -7.101 -17.798 21.277 0.48 15.37 ? CAA NKA 101 A 1 
HETATM 7 O OAB NKA . . . B 2 -7.086 -18.824 20.211 0.48 15.41 ? OAB NKA 101 A 1 
HETATM 8 C CAC NKA . . . B 2 -6.414 -18.381 19.067 0.48 15.5 ? CAC NKA 101 A 1 
HETATM 9 C CAD NKA . . . B 2 -6.233 -16.886 19.214 0.48 15.6 ? CAD NKA 101 A 1 
HETATM 10 C CAF NKA . . . B 2 -7.389 -16.035 18.633 0.48 14.87 ? CAF NKA 101 A 1 
HETATM 11 O OAK NKA . . . B 2 -8.236 -16.718 17.769 0.48 13.86 ? OAK NKA 101 A 1 
HETATM 12 C CAL NKA . . . B 2 -8.373 -16.329 16.452 0.48 14.35 ? CAL NKA 101 A 1 
HETATM 13 O OAM NKA . . . B 2 -8.206 -15.188 16.11 0.48 13.1 ? OAM NKA 101 A 1 
HETATM 14 N NAN NKA . . . B 2 -8.657 -17.347 15.616 0.48 14.15 ? NAN NKA 101 A 1 
HETATM 15 C CAO NKA . . . B 2 -8.77 -17.392 14.176 0.48 15.44 ? CAO NKA 101 A 1 
HETATM 16 C CAW NKA . . . B 2 -7.708 -18.422 13.704 0.48 15.7 ? CAW NKA 101 A 1 
HETATM 17 C CBH NKA . . . B 2 -6.503 -18.057 14.263 0.48 16.61 ? CBH NKA 101 A 1 
HETATM 18 C CBI NKA . . . B 2 -5.892 -16.894 13.833 0.48 17.71 ? CBI NKA 101 A 1 
HETATM 19 C CBJ NKA . . . B 2 -4.676 -16.48 14.387 0.48 18.57 ? CBJ NKA 101 A 1 
HETATM 20 C CBK NKA . . . B 2 -4.047 -17.22 15.379 0.48 17.58 ? CBK NKA 101 A 1 
HETATM 21 F FBU NKA . . . B 2 -2.84 -16.814 15.95 0.48 21.45 ? FBU NKA 101 A 1 
HETATM 22 C CBL NKA . . . B 2 -4.653 -18.397 15.799 0.48 17.87 ? CBL NKA 101 A 1 
HETATM 23 C CBM NKA . . . B 2 -5.857 -18.815 15.227 0.48 17.36 ? CBM NKA 101 A 1 
HETATM 24 C CAT NKA . . . B 2 -10.221 -17.733 13.687 0.48 16.34 ? CAT NKA 101 A 1 
HETATM 25 O OBO NKA . . . B 2 -10.519 -19.074 13.799 0.48 16.7 ? OBO NKA 101 A 1 
HETATM 26 C CAP NKA . . . B 2 -10.367 -17.376 12.205 0.48 16.64 ? CAP NKA 101 A 1 
HETATM 27 N NAQ NKA . . . B 2 -10.346 -15.942 12.113 0.48 15.77 ? NAQ NKA 101 A 1 
HETATM 28 C CBP NKA . . . B 2 -11.631 -15.443 11.77 0.48 16.32 ? CBP NKA 101 A 1 
HETATM 29 C CBQ NKA . . . B 2 -12.385 -14.954 13.011 0.48 15.58 ? CBQ NKA 101 A 1 
HETATM 30 C CBS NKA . . . B 2 -11.679 -13.811 13.72 0.48 16.32 ? CBS NKA 101 A 1 
HETATM 31 C CBR NKA . . . B 2 -13.666 -14.407 12.456 0.48 15.76 ? CBR NKA 101 A 1 
HETATM 32 S SAR NKA . . . B 2 -9.131 -15.306 11.098 0.48 16.7 ? SAR NKA 101 A 1 
HETATM 33 O OAU NKA . . . B 2 -7.851 -16.097 11.346 0.48 16.53 ? OAU NKA 101 A 1 
HETATM 34 O OAV NKA . . . B 2 -8.984 -13.927 11.439 0.48 15.24 ? OAV NKA 101 A 1 
HETATM 35 C CAS NKA . . . B 2 -9.59 -15.547 9.512 0.48 15.94 ? CAS NKA 101 A 1 
HETATM 36 C CAX NKA . . . B 2 -10.253 -14.57 8.829 0.48 17.55 ? CAX NKA 101 A 1 
HETATM 37 C CBB NKA . . . B 2 -9.24 -16.734 8.881 0.48 15.75 ? CBB NKA 101 A 1 
HETATM 38 C CBA NKA . . . B 2 -9.631 -16.935 7.572 0.48 16.1 ? CBA NKA 101 A 1 
HETATM 39 C CAZ NKA . . . B 2 -10.278 -15.982 6.961 0.48 16.81 ? CAZ NKA 101 A 1 
HETATM 40 N NBE NKA . . . B 2 -10.775 -15.933 5.749 0.48 19.32 ? NBE NKA 101 A 1 
HETATM 41 C CAY NKA . . . B 2 -10.564 -14.822 7.577 0.48 17.72 ? CAY NKA 101 A 1 
HETATM 42 O OBC NKA . . . B 2 -11.249 -14.046 6.668 0.48 18.9 ? OBC NKA 101 A 1 
HETATM 43 C CBD NKA . . . B 2 -11.345 -14.746 5.618 0.48 18.09 ? CBD NKA 101 A 1 
HETATM 44 N NBF NKA . . . B 2 -11.924 -14.338 4.491 0.48 19.22 ? NBF NKA 101 A 1 
HETATM 45 C CBG NKA . . . B 2 -12.572 -13.018 4.439 0.48 21.86 ? CBG NKA 101 A 1 
HETATM 46 C CBT NKA . . . B 2 -14.097 -13.135 4.57 0.48 20.68 ? CBT NKA 101 A 1 
HETATM 47 C CBN NKA . . . B 2 -12.221 -12.382 3.124 0.48 22.61 ? CBN NKA 101 A 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           47 
#