data_6OYT
#
_model_server_result.job_id            lNY-o_zSzGeU20170XwgWw 
_model_server_result.datetime_utc      '2024-11-04 20:30:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6oyt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1001}' 
#
_entry.id    6OYT 
#
_exptl.entry_id    6OYT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              445.492 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-(4-cyclopropyl-1H-imidazol-1-yl)-2-fluoro-4-methyl-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}benzamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.77 
_cell.angle_gamma         90 
_cell.entry_id            6OYT 
_cell.length_a            86.51 
_cell.length_b            73.59 
_cell.length_c            95.14 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6OYT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,K,L,R,T 1 1 
B,D,G,H,I,J,M,N,O,P,Q,S,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 K N N 
? 2 N N N 
#
_chem_comp.formula           'C24 H24 F N7 O' 
_chem_comp.formula_weight    445.492 
_chem_comp.id                NJV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-(4-cyclopropyl-1H-imidazol-1-yl)-2-fluoro-4-methyl-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Selonsertib;GS-4997 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N6 N7 NJV sing 243 n y 
N6 C21 NJV doub 244 n y 
N7 C20 NJV doub 245 n y 
C17 C18 NJV doub 246 n y 
C17 C16 NJV sing 247 n y 
C21 N5 NJV sing 248 n y 
C18 C19 NJV sing 249 n y 
C20 C16 NJV sing 250 n n 
C20 N5 NJV sing 251 n y 
C16 NH1 NJV doub 252 n y 
N5 C22 NJV sing 253 n n 
C19 CZ NJV doub 254 n y 
NH1 CZ NJV sing 255 n y 
CZ NE NJV sing 256 n n 
C22 C23 NJV sing 257 n n 
C22 C24 NJV sing 258 n n 
NE CD NJV sing 259 n n 
O1 CD NJV doub 260 n n 
CD CG NJV sing 261 n n 
F1 C1 NJV sing 262 n n 
CG C1 NJV doub 263 n y 
CG CB NJV sing 264 n y 
C1 C6 NJV sing 265 n y 
CB CA NJV doub 266 n y 
C6 C NJV doub 267 n y 
C8 N2 NJV doub 268 n y 
C8 N NJV sing 269 n y 
CA C NJV sing 270 n y 
CA N NJV sing 271 n n 
C C7 NJV sing 272 n n 
N2 C9 NJV sing 273 n y 
N C10 NJV sing 274 n y 
C9 C10 NJV doub 275 n y 
C9 C11 NJV sing 276 n n 
C13 C11 NJV sing 277 n n 
C13 C12 NJV sing 278 n n 
C11 C12 NJV sing 279 n n 
C6 H1 NJV sing 280 n n 
C11 H2 NJV sing 281 n n 
C12 H3 NJV sing 282 n n 
C12 H4 NJV sing 283 n n 
CB H5 NJV sing 284 n n 
NE H6 NJV sing 285 n n 
C10 H7 NJV sing 286 n n 
C13 H8 NJV sing 287 n n 
C13 H9 NJV sing 288 n n 
C17 H10 NJV sing 289 n n 
C18 H11 NJV sing 290 n n 
C19 H12 NJV sing 291 n n 
C21 H13 NJV sing 292 n n 
C22 H14 NJV sing 293 n n 
C23 H15 NJV sing 294 n n 
C23 H16 NJV sing 295 n n 
C23 H17 NJV sing 296 n n 
C24 H18 NJV sing 297 n n 
C24 H19 NJV sing 298 n n 
C24 H20 NJV sing 299 n n 
C7 H21 NJV sing 300 n n 
C7 H22 NJV sing 301 n n 
C7 H23 NJV sing 302 n n 
C8 H24 NJV sing 303 n n 
#
_atom_sites.entry_id                     6OYT 
_atom_sites.fract_transf_matrix[1][1]    0.011559 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001578 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013589 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010608 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NJV A 1 1001 4 NJV 715 . 
F 3 ACT A 1 1002 3 ACT ACT . 
G 2 NJV B 1 1001 2 NJV 715 . 
H 3 ACT B 1 1002 1 ACT ACT . 
I 3 ACT B 1 1003 7 ACT ACT . 
J 3 ACT B 1 1004 8 ACT ACT . 
K 2 NJV C 1 1001 3 NJV 715 . 
L 3 ACT C 1 1002 4 ACT ACT . 
M 3 ACT D 1 1001 1001 ACT ACT . 
N 2 NJV D 1 1002 1 NJV 715 . 
O 3 ACT D 1 1003 2 ACT ACT . 
P 3 ACT D 1 1004 5 ACT ACT . 
Q 3 ACT D 1 1005 6 ACT ACT . 
R 4 HOH A 1 1101 37 HOH HOH . 
R 4 HOH A 2 1102 26 HOH HOH . 
R 4 HOH A 3 1103 8 HOH HOH . 
R 4 HOH A 4 1104 40 HOH HOH . 
R 4 HOH A 5 1105 17 HOH HOH . 
R 4 HOH A 6 1106 60 HOH HOH . 
R 4 HOH A 7 1107 32 HOH HOH . 
R 4 HOH A 8 1108 43 HOH HOH . 
R 4 HOH A 9 1109 14 HOH HOH . 
R 4 HOH A 10 1110 58 HOH HOH . 
R 4 HOH A 11 1111 64 HOH HOH . 
R 4 HOH A 12 1112 51 HOH HOH . 
R 4 HOH A 13 1113 67 HOH HOH . 
R 4 HOH A 14 1114 33 HOH HOH . 
R 4 HOH A 15 1115 62 HOH HOH . 
R 4 HOH A 16 1116 19 HOH HOH . 
R 4 HOH A 17 1117 20 HOH HOH . 
R 4 HOH A 18 1118 80 HOH HOH . 
R 4 HOH A 19 1119 52 HOH HOH . 
R 4 HOH A 20 1120 34 HOH HOH . 
S 4 HOH B 1 1101 57 HOH HOH . 
S 4 HOH B 2 1102 12 HOH HOH . 
S 4 HOH B 3 1103 11 HOH HOH . 
S 4 HOH B 4 1104 3 HOH HOH . 
S 4 HOH B 5 1105 54 HOH HOH . 
S 4 HOH B 6 1106 78 HOH HOH . 
S 4 HOH B 7 1107 55 HOH HOH . 
S 4 HOH B 8 1108 45 HOH HOH . 
S 4 HOH B 9 1109 68 HOH HOH . 
S 4 HOH B 10 1110 76 HOH HOH . 
S 4 HOH B 11 1111 35 HOH HOH . 
S 4 HOH B 12 1112 38 HOH HOH . 
S 4 HOH B 13 1113 22 HOH HOH . 
T 4 HOH C 1 1101 41 HOH HOH . 
T 4 HOH C 2 1102 18 HOH HOH . 
T 4 HOH C 3 1103 53 HOH HOH . 
T 4 HOH C 4 1104 70 HOH HOH . 
T 4 HOH C 5 1105 71 HOH HOH . 
T 4 HOH C 6 1106 5 HOH HOH . 
T 4 HOH C 7 1107 61 HOH HOH . 
T 4 HOH C 8 1108 73 HOH HOH . 
T 4 HOH C 9 1109 36 HOH HOH . 
U 4 HOH D 1 1101 27 HOH HOH . 
U 4 HOH D 2 1102 44 HOH HOH . 
U 4 HOH D 3 1103 48 HOH HOH . 
U 4 HOH D 4 1104 46 HOH HOH . 
U 4 HOH D 5 1105 74 HOH HOH . 
U 4 HOH D 6 1106 7 HOH HOH . 
U 4 HOH D 7 1107 15 HOH HOH . 
U 4 HOH D 8 1108 59 HOH HOH . 
U 4 HOH D 9 1109 50 HOH HOH . 
U 4 HOH D 10 1110 1 HOH HOH . 
U 4 HOH D 11 1111 77 HOH HOH . 
U 4 HOH D 12 1112 16 HOH HOH . 
U 4 HOH D 13 1113 56 HOH HOH . 
U 4 HOH D 14 1114 2 HOH HOH . 
U 4 HOH D 15 1115 39 HOH HOH . 
U 4 HOH D 16 1116 72 HOH HOH . 
U 4 HOH D 17 1117 9 HOH HOH . 
U 4 HOH D 18 1118 65 HOH HOH . 
U 4 HOH D 19 1119 79 HOH HOH . 
U 4 HOH D 20 1120 6 HOH HOH . 
U 4 HOH D 21 1121 4 HOH HOH . 
U 4 HOH D 22 1122 28 HOH HOH . 
U 4 HOH D 23 1123 63 HOH HOH . 
U 4 HOH D 24 1124 69 HOH HOH . 
U 4 HOH D 25 1125 66 HOH HOH . 
U 4 HOH D 26 1126 24 HOH HOH . 
U 4 HOH D 27 1127 47 HOH HOH . 
U 4 HOH D 28 1128 75 HOH HOH . 
U 4 HOH D 29 1129 49 HOH HOH . 
U 4 HOH D 30 1130 10 HOH HOH . 
U 4 HOH D 31 1131 23 HOH HOH . 
U 4 HOH D 32 1132 31 HOH HOH . 
U 4 HOH D 33 1133 25 HOH HOH . 
U 4 HOH D 34 1134 21 HOH HOH . 
U 4 HOH D 35 1135 30 HOH HOH . 
U 4 HOH D 36 1136 29 HOH HOH . 
U 4 HOH D 37 1137 13 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NJV . . . E 2 -4.344 -18.253 25.469 1 38.83 ? C1 NJV 1001 A 1 
HETATM 2 C C6 NJV . . . E 2 -4.106 -19.079 26.533 1 37.46 ? C6 NJV 1001 A 1 
HETATM 3 C C11 NJV . . . E 2 1.572 -17.463 30.141 1 34.77 ? C11 NJV 1001 A 1 
HETATM 4 C C12 NJV . . . E 2 2.801 -16.608 30.177 1 33.22 ? C12 NJV 1001 A 1 
HETATM 5 C C16 NJV . . . E 2 -7.203 -16.113 20.829 1 43.96 ? C16 NJV 1001 A 1 
HETATM 6 N N NJV . . . E 2 -0.838 -17.836 27.523 1 36.64 ? N NJV 1001 A 1 
HETATM 7 C CA NJV . . . E 2 -2.136 -17.863 27.061 1 36.9 ? CA NJV 1001 A 1 
HETATM 8 C C NJV . . . E 2 -2.91 -18.985 27.202 1 36.73 ? C NJV 1001 A 1 
HETATM 9 C CB NJV . . . E 2 -2.218 -17.246 25.838 1 38.61 ? CB NJV 1001 A 1 
HETATM 10 C CG NJV . . . E 2 -3.402 -17.312 25.142 1 39.27 ? CG NJV 1001 A 1 
HETATM 11 C CD NJV . . . E 2 -3.661 -16.437 24.006 1 40.14 ? CD NJV 1001 A 1 
HETATM 12 N NE NJV . . . E 2 -4.817 -16.824 23.365 1 40.96 ? NE NJV 1001 A 1 
HETATM 13 C CZ NJV . . . E 2 -5.408 -16.247 22.233 1 42.71 ? CZ NJV 1001 A 1 
HETATM 14 N NH1 NJV . . . E 2 -6.64 -16.661 21.909 1 43.89 ? NH1 NJV 1001 A 1 
HETATM 15 C C10 NJV . . . E 2 -0.527 -17.612 28.829 1 35.74 ? C10 NJV 1001 A 1 
HETATM 16 C C13 NJV . . . E 2 2.914 -18.104 30.286 1 33.16 ? C13 NJV 1001 A 1 
HETATM 17 C C17 NJV . . . E 2 -6.571 -15.172 20.048 1 44.9 ? C17 NJV 1001 A 1 
HETATM 18 C C18 NJV . . . E 2 -5.304 -14.759 20.391 1 44.52 ? C18 NJV 1001 A 1 
HETATM 19 C C19 NJV . . . E 2 -4.709 -15.312 21.503 1 43.86 ? C19 NJV 1001 A 1 
HETATM 20 C C20 NJV . . . E 2 -8.531 -16.533 20.437 1 47.46 ? C20 NJV 1001 A 1 
HETATM 21 C C21 NJV . . . E 2 -10.563 -17.358 20.284 1 45.61 ? C21 NJV 1001 A 1 
HETATM 22 C C22 NJV . . . E 2 -9.574 -17.753 22.479 1 46.81 ? C22 NJV 1001 A 1 
HETATM 23 C C23 NJV . . . E 2 -8.661 -18.919 22.761 1 46.13 ? C23 NJV 1001 A 1 
HETATM 24 C C24 NJV . . . E 2 -9.475 -16.69 23.536 1 46.81 ? C24 NJV 1001 A 1 
HETATM 25 C C7 NJV . . . E 2 -2.749 -19.86 28.394 1 35.76 ? C7 NJV 1001 A 1 
HETATM 26 C C8 NJV . . . E 2 0.322 -17.96 26.817 1 35.57 ? C8 NJV 1001 A 1 
HETATM 27 C C9 NJV . . . E 2 0.843 -17.64 28.863 1 32.93 ? C9 NJV 1001 A 1 
HETATM 28 F F1 NJV . . . E 2 -5.476 -18.374 24.762 1 39.94 ? F1 NJV 1001 A 1 
HETATM 29 N N2 NJV . . . E 2 1.368 -17.859 27.612 1 35.79 ? N2 NJV 1001 A 1 
HETATM 30 N N5 NJV . . . E 2 -9.501 -17.224 21.126 1 44.91 ? N5 NJV 1001 A 1 
HETATM 31 N N6 NJV . . . E 2 -10.275 -16.8 19.134 1 45.66 ? N6 NJV 1001 A 1 
HETATM 32 N N7 NJV . . . E 2 -9.005 -16.286 19.236 1 45.77 ? N7 NJV 1001 A 1 
HETATM 33 O O1 NJV . . . E 2 -2.879 -15.525 23.78 1 39.93 ? O1 NJV 1001 A 1 
#
_model_server_stats.io_time_ms              106 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           33 
#