data_6OZE # _model_server_result.job_id SCezIFgaqaPaQMfK5NNhqA _model_server_result.datetime_utc '2024-10-10 09:26:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6oze # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 6OZE # _exptl.entry_id 6OZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6OZE _cell.length_a 50.949 _cell.length_b 50.949 _cell.length_c 102.978 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 37 A LEU 45 1_555 G NA NA . A NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc2 A OE1 GLN 38 A GLN 46 1_555 G NA NA . A NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 A O PHE 64 A PHE 72 1_555 G NA NA . A NA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc4 A O ARG 166 A ARG 174 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc5 A O LEU 168 A LEU 176 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 A OE1 GLN 169 A GLN 177 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? metalc ? metalc7 F NA NA . A NA 305 1_555 H O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc8 F NA NA . A NA 305 1_555 H O HOH . A HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc9 F NA NA . A NA 305 1_555 H O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc10 G NA NA . A NA 306 1_555 H O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc11 G NA NA . A NA 306 1_555 H O HOH . A HOH 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc12 G NA NA . A NA 306 1_555 H O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6OZE _atom_sites.fract_transf_matrix[1][1] 0.019627 _atom_sites.fract_transf_matrix[1][2] 0.011332 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022664 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009711 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 1 ACT ACT . C 2 ACT A 1 302 3 ACT ACT . D 3 GOL A 1 303 4 GOL GOL . E 3 GOL A 1 304 6 GOL GOL . F 4 NA A 1 305 1 NA NA . G 4 NA A 1 306 2 NA NA . H 5 HOH A 1 401 190 HOH HOH . H 5 HOH A 2 402 15 HOH HOH . H 5 HOH A 3 403 153 HOH HOH . H 5 HOH A 4 404 201 HOH HOH . H 5 HOH A 5 405 33 HOH HOH . H 5 HOH A 6 406 96 HOH HOH . H 5 HOH A 7 407 119 HOH HOH . H 5 HOH A 8 408 120 HOH HOH . H 5 HOH A 9 409 72 HOH HOH . H 5 HOH A 10 410 188 HOH HOH . H 5 HOH A 11 411 199 HOH HOH . H 5 HOH A 12 412 47 HOH HOH . H 5 HOH A 13 413 46 HOH HOH . H 5 HOH A 14 414 140 HOH HOH . H 5 HOH A 15 415 198 HOH HOH . H 5 HOH A 16 416 36 HOH HOH . H 5 HOH A 17 417 84 HOH HOH . H 5 HOH A 18 418 44 HOH HOH . H 5 HOH A 19 419 39 HOH HOH . H 5 HOH A 20 420 191 HOH HOH . H 5 HOH A 21 421 11 HOH HOH . H 5 HOH A 22 422 159 HOH HOH . H 5 HOH A 23 423 70 HOH HOH . H 5 HOH A 24 424 81 HOH HOH . H 5 HOH A 25 425 139 HOH HOH . H 5 HOH A 26 426 52 HOH HOH . H 5 HOH A 27 427 195 HOH HOH . H 5 HOH A 28 428 86 HOH HOH . H 5 HOH A 29 429 9 HOH HOH . H 5 HOH A 30 430 71 HOH HOH . H 5 HOH A 31 431 111 HOH HOH . H 5 HOH A 32 432 23 HOH HOH . H 5 HOH A 33 433 75 HOH HOH . H 5 HOH A 34 434 123 HOH HOH . H 5 HOH A 35 435 97 HOH HOH . H 5 HOH A 36 436 3 HOH HOH . H 5 HOH A 37 437 49 HOH HOH . H 5 HOH A 38 438 63 HOH HOH . H 5 HOH A 39 439 157 HOH HOH . H 5 HOH A 40 440 48 HOH HOH . H 5 HOH A 41 441 25 HOH HOH . H 5 HOH A 42 442 178 HOH HOH . H 5 HOH A 43 443 67 HOH HOH . H 5 HOH A 44 444 65 HOH HOH . H 5 HOH A 45 445 152 HOH HOH . H 5 HOH A 46 446 17 HOH HOH . H 5 HOH A 47 447 98 HOH HOH . H 5 HOH A 48 448 59 HOH HOH . H 5 HOH A 49 449 41 HOH HOH . H 5 HOH A 50 450 136 HOH HOH . H 5 HOH A 51 451 18 HOH HOH . H 5 HOH A 52 452 88 HOH HOH . H 5 HOH A 53 453 62 HOH HOH . H 5 HOH A 54 454 13 HOH HOH . H 5 HOH A 55 455 114 HOH HOH . H 5 HOH A 56 456 76 HOH HOH . H 5 HOH A 57 457 91 HOH HOH . H 5 HOH A 58 458 174 HOH HOH . H 5 HOH A 59 459 45 HOH HOH . H 5 HOH A 60 460 43 HOH HOH . H 5 HOH A 61 461 34 HOH HOH . H 5 HOH A 62 462 1 HOH HOH . H 5 HOH A 63 463 21 HOH HOH . H 5 HOH A 64 464 8 HOH HOH . H 5 HOH A 65 465 26 HOH HOH . H 5 HOH A 66 466 124 HOH HOH . H 5 HOH A 67 467 57 HOH HOH . H 5 HOH A 68 468 2 HOH HOH . H 5 HOH A 69 469 192 HOH HOH . H 5 HOH A 70 470 68 HOH HOH . H 5 HOH A 71 471 194 HOH HOH . H 5 HOH A 72 472 79 HOH HOH . H 5 HOH A 73 473 202 HOH HOH . H 5 HOH A 74 474 7 HOH HOH . H 5 HOH A 75 475 116 HOH HOH . H 5 HOH A 76 476 109 HOH HOH . H 5 HOH A 77 477 22 HOH HOH . H 5 HOH A 78 478 175 HOH HOH . H 5 HOH A 79 479 129 HOH HOH . H 5 HOH A 80 480 184 HOH HOH . H 5 HOH A 81 481 134 HOH HOH . H 5 HOH A 82 482 54 HOH HOH . H 5 HOH A 83 483 20 HOH HOH . H 5 HOH A 84 484 16 HOH HOH . H 5 HOH A 85 485 90 HOH HOH . H 5 HOH A 86 486 27 HOH HOH . H 5 HOH A 87 487 5 HOH HOH . H 5 HOH A 88 488 87 HOH HOH . H 5 HOH A 89 489 180 HOH HOH . H 5 HOH A 90 490 37 HOH HOH . H 5 HOH A 91 491 12 HOH HOH . H 5 HOH A 92 492 10 HOH HOH . H 5 HOH A 93 493 171 HOH HOH . H 5 HOH A 94 494 133 HOH HOH . H 5 HOH A 95 495 166 HOH HOH . H 5 HOH A 96 496 176 HOH HOH . H 5 HOH A 97 497 131 HOH HOH . H 5 HOH A 98 498 200 HOH HOH . H 5 HOH A 99 499 117 HOH HOH . H 5 HOH A 100 500 115 HOH HOH . H 5 HOH A 101 501 42 HOH HOH . H 5 HOH A 102 502 181 HOH HOH . H 5 HOH A 103 503 64 HOH HOH . H 5 HOH A 104 504 100 HOH HOH . H 5 HOH A 105 505 40 HOH HOH . H 5 HOH A 106 506 156 HOH HOH . H 5 HOH A 107 507 51 HOH HOH . H 5 HOH A 108 508 66 HOH HOH . H 5 HOH A 109 509 113 HOH HOH . H 5 HOH A 110 510 101 HOH HOH . H 5 HOH A 111 511 53 HOH HOH . H 5 HOH A 112 512 141 HOH HOH . H 5 HOH A 113 513 38 HOH HOH . H 5 HOH A 114 514 83 HOH HOH . H 5 HOH A 115 515 93 HOH HOH . H 5 HOH A 116 516 168 HOH HOH . H 5 HOH A 117 517 169 HOH HOH . H 5 HOH A 118 518 104 HOH HOH . H 5 HOH A 119 519 50 HOH HOH . H 5 HOH A 120 520 32 HOH HOH . H 5 HOH A 121 521 164 HOH HOH . H 5 HOH A 122 522 148 HOH HOH . H 5 HOH A 123 523 145 HOH HOH . H 5 HOH A 124 524 193 HOH HOH . H 5 HOH A 125 525 107 HOH HOH . H 5 HOH A 126 526 144 HOH HOH . H 5 HOH A 127 527 143 HOH HOH . H 5 HOH A 128 528 197 HOH HOH . H 5 HOH A 129 529 61 HOH HOH . H 5 HOH A 130 530 187 HOH HOH . H 5 HOH A 131 531 165 HOH HOH . H 5 HOH A 132 532 24 HOH HOH . H 5 HOH A 133 533 99 HOH HOH . H 5 HOH A 134 534 158 HOH HOH . H 5 HOH A 135 535 173 HOH HOH . H 5 HOH A 136 536 118 HOH HOH . H 5 HOH A 137 537 82 HOH HOH . H 5 HOH A 138 538 128 HOH HOH . H 5 HOH A 139 539 146 HOH HOH . H 5 HOH A 140 540 196 HOH HOH . H 5 HOH A 141 541 172 HOH HOH . H 5 HOH A 142 542 182 HOH HOH . H 5 HOH A 143 543 179 HOH HOH . H 5 HOH A 144 544 138 HOH HOH . H 5 HOH A 145 545 94 HOH HOH . H 5 HOH A 146 546 160 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 15.458 _atom_site.Cartn_y -25.82 _atom_site.Cartn_z -9.157 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 306 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #